Basic Information

Gene Symbol
Kdm5
Assembly
GCA_949316355.1
Location
OX438538.1:20160222-20174502[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 7.2e-25 2.1e-21 76.3 0.1 2 89 117 200 116 200 0.94
2 2 0.045 1.3e+02 3.2 0.0 26 70 1235 1281 1218 1296 0.73

Sequence Information

Coding Sequence
ATGACTACAAAAGTAGAAAAGCAAGTGAATGGTAATAATAGTATAAAAAACCACCCAGGGAGTTCTAAAAACTCTCCAATAAAATGCAATGAACATCACAACCAGTATAAAGAAGAAAcctttgaatttgaaatacctCCAGAAGCTCCAGTATTTTACCCTACAGAAGAAGAATTTCAGGATCCTCTAGCCTATATTGCCAAAATAAGGCCTATAGCTGAAAATACaggaatttgtaaaataaaaccACCATCACATTGGCAACCTCCATTTGCAGTTGATGTAGATAAATTGAGATTTACTCCTAGAATACAAAGACTAAATGAATTAGAGGCTAAGACACgtgtaaaattaaatttcctTGACCAAATAGCAAAGTTTTGGGAGCTTCAAGGATCTTCGCTTAAAATTCCTATGGTGGAAAGGCGGGCTTTAGACTTATACACATTACATAGGATTGTACAGCTGGAAGGTGGATTTGAAAACGTAACAAAAGAAAGAAAGTGGTCCAAAATATCACACAGGATGGGTCACCAAATAGGAAAAAGCATCGGAACAATACTTAAAACACATTATGAGAGACTTTTATATCCCTATGATGTCTTCAAAGCTGGCAAATCTGTTGATGTTaaacaGCCAGATCGTCACGAAACAGAGAAAACGGATAAAGACTATAAGCCTCATGGCATTGCAAGTAGAATGCAAATTAAACCACCACCTGAGAGGAACGCCAGGCGTTCCAAAAGATTTGAGGCGAACGATGAGAACCTAACATTGAAAGTAAAAGAAGAGAAACCAGATGTAGACGACGAGTCAGGAAATAAAGAACTAAGACGGTTACAATTTTATGGTGCTGGTCCCAAAATGGCTGGATATGATGATAAAAAGGATGTGAAACCCAGGAGCAAGCAGTGCAAATTTGATTTCGATCCTCTCGCTAAATATGTGTGCCACAACTGCAACAGGGGAGATGCAGAAGAATACATGCTTCTTTGTGATGGATGTGATGACAGTTATCATACGTTTTGCCTGATGCCTCCGCTCAGTGAGATACCAAAAGGAGACTGGCGATGTCCGAAATGTGTTGCAGAAGAGGTATCAAAGCCAATGGAAGCTTTTGGTTTTGAGCAGGCACAGCGTGAATACACTCTACAGCAGTTTGGCGAGATGGCAGATCAGTTCAAGTCCGAATATTTCAACATGCCAGTACATATGGTTCCAACTGGCACAGTGGAGAGAGAATTCTGGAGGATAGTTTCCTCAATAGATGAGGATGTTACAGTTGAATATGGAGCTGACTTGCATACGATGGACCACGGGTCTGGATTTCCTACAAAATCATCGTCAAACCTATTCCCAGGGGATAAAGAATATGCTGAGTCCAGCTGGAATCTTAATAACCTACCCATACTAGAAGGCTCCGTGCTAGGATACATCAATGCTGATATCTCAGGAATGAAGGTTCCCTGGATGTACGTAGGAATGTGCTTTGCCACCTTTTGCTGGCACAACGAAGATCACTGGAGTTATTCTATCAACTACCTGCATTGGGGTGAAGCTAAAACTTGGTATGGAGTACCTGGAAGCAAAGCAGAGTCTTTCGAGGAAACTATGAAGTCTGCAGCACCAGAACTGTTCCACTCTCAACCAGACTTGTTGCATCAGTTGGTGACCATCATGAACCCAAATATCTTGATGAATGCAGGTGTGCCTGTGTATAGGACTGATCAACATGCTGGAGAGTTTGTGGTAACGTTTCCTAGAGCGTACCATGCTGGGTTCAACCAGGGGTACAATTTTGCCGAGGCTGTCAACTTTGCACCAGCCGATTGGTTGAGGATGGGAAGAGAATGTGTTTTGCACTATTCCCACCTGAGGcgattttgtgttttttctcATGATGAACTTGTTTGCAAAATGGCCTTGGACCGTGAGAAGTTAGATCTTACCATCGCAGCTGCCACATATCAAGATATGCTAGTCATGGTggatactgaaaaaaaattgaggaagaCTCTTCTAGACTGGGGCGTCACGAACGCGGAAAGAGAAGCTTTCGAGCTTTTGCCAGACGACGAACGTCAGTGTGAGGTATGCAAGACAACATGTTTCCTGTCAGCGATGACCTGCAGATGTTCCACCGACGTCCTGGTTTGCCTGAGGCATTACAAAAACCTTTGCGAGTGTCCAGCAGCTAACAGGACTTTGAGGTATCGGTACACCTTGGATGAGCTACCCGTCATGTTGAAGGCTCTGAAGTTGAAAGCAGAGTCTTTTGATCATTGGGTAGCTAGAGTCAAAGATGCATTAGATCCAAAAACTCCAAAGACGCTGACTCTTTCAGATCTGAAGGCCTTGTTAAGCGAAGCCGATGGTAAAAAGTTCCCGAAATGCGATCTGCTACAGACGTTGACTAGTGCCGTTGTTGATGCTGAAAAATGTGCCAGTGTAATCCACCAACTCGATTTGAATAAAATGCGCACTAGGACCAGAAATTCAAATGACACCAAGTACAAATTGACCGTTGAAGAATTAACATTGTTCTGCGAGGAAATCGATAGCTTGGCTTGTATTTTGGAAGAGGCCAAAAGTATAAGAGAACTTTTAGCGGAAACGAGGAAATTCGAAGAAAAAAGCGAACACTTGTTGAAGCTACCCGCCAAAGAATGTCCCATTATTGAGCTAGAAGCCTGTAGTTCTCATGGAAACGGTCTCTGTATCGAGCTTCCCAATTTAAAAAGTATAACTAACAGATTGAAACAGTGTCAATGGCTGAAAAGTGTAGACAATTACAGAAATAAAACTGACGTGATGGGACTTGATGTAATTAAGAACCTTATACAAGAAGGCATGTGTGTGACTCCGCACCCAGAAGTGGAAGAAGAACTGTCTCGTTTGCAGAGTGTCCTCCAGGCAAGTGAAGATTGGGAAGAACAAGCTGCACAGGTCTTGAAATCCGAAGACAATAATGTTCTTATTCAAGTAGATAAGCTCTTGAAGGATGCGTCAAAAATATCTTGTTTCCTTCCAACTGAAAGTCTCTTGTTCGATTCTATGAAGAAAGCAAGAGACTGGCTAAGGCTACTTGAAGAAATGAACTCAGCTGAGTACTACCCATACTTCAGTGCCATGGAGGAACTCATCAAAAAAGGCAGGAATCTAGCTCTCCATTTAGTAGAAGTCGATAGAATGAACGACTATCTGGTTCTGGCTACAGGGTGGAAAGAAAAAACTAGTAGGGCATTTTTGAGGAAAAATTCATCATGTACGTTGATGGAAGCACTTTCACCAAGAATATCTATGCCCAATCCACCCAAAGCTAAAAAAGGCAAAAATGCTGAAGAGGAAACATCCATACAGTTGACGAACACAATGGACCCAGCAGCTGTGGTAGCAGTTTTCAAAGAAGCCGAAGACACAGAAATGGCTCTGATCAAAAAGATAAGGAGTCTAAATTTGACAAAAAGCTTGGATCCATCAGACAATTGCACTTTCTGTATATGTGGTAGAGGAATGTTTGGGCTGATGATGCAATGTGAACTTTGCAAAGACTGGTTCCATTCCACTTGCACCCAATTACCCAAAGTAGCGACTACAAAGTACAAAGGAAACTTCACGAACATTGCGTTGCACTTAGGATTTAAAGATTGTAAATTTCTATGTCCTAATTGTCAACGCACAAAACGTCCGAGGCTAGATGTCATTCTAGGCTTGCTAATGTCCCTACAAAAACTGTATGTTCGAGTACCTGAAGGAGAAGCCTTACAATGCCTCACAGAAAGAGCAATGAACTGGCAGGACAGAGCTAGGCAACTTTTATTGAATTCTGAATTGGAAGTCGCTAAAAACAAATTGACTGTTTTCAGCCAAAAGTATAACGAAGCAGCAGCGAGGCAAAGAACTGAGAAAATTATATCAACTGAACTAAAAAGGGCTTCGAAAAATCCTGAACTGCACCAAAGAGTACAAGAAATAACACCATACAGTGGTGTGAATGAAGACGGCGTTACCACTGGAGATAGTGGCATCAATGATTCTGACGATGGCTCGATAGACGACGATAGAATGGGAGAGCATGCTTACTCTCTCCATCTACCTAGATTCGGAGATGACGATTACGTCCTACACATCAATCCCGATATTAAAAGGCAGCTGGAGGAGCTTTTGATCGAAGGTGACCTACTGGAGGTGTATCTAGATGAGACATTCGCCCTGTGGAAGCTCATGCAGGCATCCAGGGACCCCGACAAAGAAGCTATACTCATCGACTTTGATgcaAACCAAAAGAACAACGCTCCAAAAAAGAGGGGCCGAAAACGACTTTCAGACGAGGCTGACTTGAAGAAGGTGACGAAGACTGTGAAAGTCGATACAAAGACCATTCGTGGTCGGAAAATAAATGGCACCAAGGAGATAAAGAAACGAGGCAAACGGAGAGTGCGGAGGGCCCAATCAACGGCATCTGACAGTGATGATGATGACGACGATGAGACCTGCGCAGCCAACGGTTGCCAGAAACCTACCGGCCAAAACGTAGACTGGGTACAGTGTGATGGTGGTTGTGAACAGTGGTTCCACATGGCTTGTGTTGGCCTTTCGGCCGAGGACATTAACGAGGACGAAGACTATATTTGTAGCACTTGTTCGCGTAGTACAACCTTCGATAGCCTCGACAGCAGGTCGAGTAGTCCTAGGTCGCCGGACTCGACACAGCCTTCAACGTCCAAGGATAATTCATAG
Protein Sequence
MTTKVEKQVNGNNSIKNHPGSSKNSPIKCNEHHNQYKEETFEFEIPPEAPVFYPTEEEFQDPLAYIAKIRPIAENTGICKIKPPSHWQPPFAVDVDKLRFTPRIQRLNELEAKTRVKLNFLDQIAKFWELQGSSLKIPMVERRALDLYTLHRIVQLEGGFENVTKERKWSKISHRMGHQIGKSIGTILKTHYERLLYPYDVFKAGKSVDVKQPDRHETEKTDKDYKPHGIASRMQIKPPPERNARRSKRFEANDENLTLKVKEEKPDVDDESGNKELRRLQFYGAGPKMAGYDDKKDVKPRSKQCKFDFDPLAKYVCHNCNRGDAEEYMLLCDGCDDSYHTFCLMPPLSEIPKGDWRCPKCVAEEVSKPMEAFGFEQAQREYTLQQFGEMADQFKSEYFNMPVHMVPTGTVEREFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKSSSNLFPGDKEYAESSWNLNNLPILEGSVLGYINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEAKTWYGVPGSKAESFEETMKSAAPELFHSQPDLLHQLVTIMNPNILMNAGVPVYRTDQHAGEFVVTFPRAYHAGFNQGYNFAEAVNFAPADWLRMGRECVLHYSHLRRFCVFSHDELVCKMALDREKLDLTIAAATYQDMLVMVDTEKKLRKTLLDWGVTNAEREAFELLPDDERQCEVCKTTCFLSAMTCRCSTDVLVCLRHYKNLCECPAANRTLRYRYTLDELPVMLKALKLKAESFDHWVARVKDALDPKTPKTLTLSDLKALLSEADGKKFPKCDLLQTLTSAVVDAEKCASVIHQLDLNKMRTRTRNSNDTKYKLTVEELTLFCEEIDSLACILEEAKSIRELLAETRKFEEKSEHLLKLPAKECPIIELEACSSHGNGLCIELPNLKSITNRLKQCQWLKSVDNYRNKTDVMGLDVIKNLIQEGMCVTPHPEVEEELSRLQSVLQASEDWEEQAAQVLKSEDNNVLIQVDKLLKDASKISCFLPTESLLFDSMKKARDWLRLLEEMNSAEYYPYFSAMEELIKKGRNLALHLVEVDRMNDYLVLATGWKEKTSRAFLRKNSSCTLMEALSPRISMPNPPKAKKGKNAEEETSIQLTNTMDPAAVVAVFKEAEDTEMALIKKIRSLNLTKSLDPSDNCTFCICGRGMFGLMMQCELCKDWFHSTCTQLPKVATTKYKGNFTNIALHLGFKDCKFLCPNCQRTKRPRLDVILGLLMSLQKLYVRVPEGEALQCLTERAMNWQDRARQLLLNSELEVAKNKLTVFSQKYNEAAARQRTEKIISTELKRASKNPELHQRVQEITPYSGVNEDGVTTGDSGINDSDDGSIDDDRMGEHAYSLHLPRFGDDDYVLHINPDIKRQLEELLIEGDLLEVYLDETFALWKLMQASRDPDKEAILIDFDANQKNNAPKKRGRKRLSDEADLKKVTKTVKVDTKTIRGRKINGTKEIKKRGKRRVRRAQSTASDSDDDDDDETCAANGCQKPTGQNVDWVQCDGGCEQWFHMACVGLSAEDINEDEDYICSTCSRSTTFDSLDSRSSSPRSPDSTQPSTSKDNS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00386968;
90% Identity
-
80% Identity
-