Basic Information

Insect: Brenthis hecate
Gene Symbol: -
Assembly: GCA_951806755.1
Location: OX638282.1:5426359-5432611[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 2.8e-07 2.2e-05 25.1 1.1 1 23 149 171 149 171 0.97

2 10 0.00081 0.065 14.2 1.1 2 23 177 198 176 198 0.96

3 10 3.1e-08 2.5e-06 28.1 1.5 1 23 204 226 204 226 0.99

4 10 0.0013 0.11 13.5 0.3 1 21 232 252 232 253 0.95

5 10 1.1e-05 0.00085 20.1 1.7 3 23 266 286 264 286 0.97

6 10 1.2e-06 9.6e-05 23.1 1.0 1 23 292 314 292 314 0.97

7 10 0.00061 0.049 14.6 2.7 1 23 320 342 320 342 0.98

8 10 2.9e-05 0.0023 18.7 3.9 1 23 348 370 348 370 0.97

9 10 2.6e-06 0.00021 22.0 0.9 2 23 377 398 376 398 0.97

10 10 0.00037 0.03 15.2 2.4 1 23 404 427 404 427 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	2.8e-07	2.2e-05	25.1	1.1	1	23	149	171	149	171	0.97
2	10	0.00081	0.065	14.2	1.1	2	23	177	198	176	198	0.96
3	10	3.1e-08	2.5e-06	28.1	1.5	1	23	204	226	204	226	0.99
4	10	0.0013	0.11	13.5	0.3	1	21	232	252	232	253	0.95
5	10	1.1e-05	0.00085	20.1	1.7	3	23	266	286	264	286	0.97
6	10	1.2e-06	9.6e-05	23.1	1.0	1	23	292	314	292	314	0.97
7	10	0.00061	0.049	14.6	2.7	1	23	320	342	320	342	0.98
8	10	2.9e-05	0.0023	18.7	3.9	1	23	348	370	348	370	0.97
9	10	2.6e-06	0.00021	22.0	0.9	2	23	377	398	376	398	0.97
10	10	0.00037	0.03	15.2	2.4	1	23	404	427	404	427	0.93

Sequence Information

Coding Sequence: atgtcTCTCGAATACGTTAAAATTAAGATCGAACCTGGTTTAGACGAACCATCATCGTCAAATAATAATGTGAATAGTTTCGGTGATTCCGAACATTTtagtgaaaatataaaaaaaagattagaaaatagtaataattacgACAACACAGAGTTTGTGAATATTAAAGTAGAACCAGATATAATTGATTACGATTACAAAGGCGATCCCGAAGCAGAACATGAACAAGCTCAATGGCAAAATGTCCCATTCAAATATGAGCCGGGACTCCAACCAAATATAAACATAGAAGTTAATATTAAGCAAGAACCCGAAGAATTAGAGACGACTgagAATGATTTCAACTTCGCCGTGCCTCAAGGTTTGCCGCCAAAGCctcctaatatatttattagtgatGtatCAGAAGAAGTTTTAAGCCTCAATTCTACAATAGATGGTAAATATATGTGTCCAATATGCCATAAACGTTTCGCAAGCAAAGCCAACGTACAACGGCATATGCTGTTACACACTAGAGAGAAACTCGAATGTGCCACTTGCTTTAGACAATTCGTCAAACCCGGTCACTATGAACGACATTTACTCACACATTCGACAGAAAAACGTTTCAAATGTGAAGAATGTGGTAAAATGTTCAGAACCACATCAAATTTAGAACAGCATAAACGTATACATCTAGCAGTCAAACCGTTTGAGTGTCAGCAATGTTTAAGACAATTTGCGGTGAAAGCAAATCTAATTAAACACCAAAGTAAAGGTAAATGCAGACGTCCAAGAGAAGAACCAATAATATGTACGGTGTGCAATAAGACATTTAAAAAGGAGTTTCTATTGAAAAGTCACCTGCGAAGGCACACAACAGAAAGACCGTACGTTTGTGACAAGTGCGATATGAGTTTCAAGTACAAATCGACTTTAATCAGACATGTTCAACTTCATAACGGTATAAAACCCTATTCCTGTAAAGTTTGCAGGAAAAAGTTTACCCATGCTGGCCTAATTAAACCCCATATGAGACGCCATACCGGTGAAAAACCATATGCTTGCCCGATTTGCAACAAACTTTTCGCGCATAAACACAACATGCAAAGACATACGTTGCGTCATGCGAAAATTAAGCATTTAGTATGTGATGTGTGCAACAAAACCTTCCCAAaggaaagtcggttaaaatatcATATGAGAACGCACACGAAAGCTAAACCGTTTCTCTGTGCGGTTTGCCCAAAGACATTTTCGCatagacaaaatataataaggCATTACAGTAGAAAACATCCAAACGACACGTATAATTGCAAAGATACAGACGCGAGTGTCGCAAAAGATGTGTGGGAGAAAGTGAAAAACCGCAATCTAGAAATCAAAGTTGACTTCTGTGaagttaaaattgaaatatcagATAACAGCGATGACGAGATtctggcgaatttcaaaaaataa
Protein Sequence: MSLEYVKIKIEPGLDEPSSSNNNVNSFGDSEHFSENIKKRLENSNNYDNTEFVNIKVEPDIIDYDYKGDPEAEHEQAQWQNVPFKYEPGLQPNINIEVNIKQEPEELETTENDFNFAVPQGLPPKPPNIFISDVSEEVLSLNSTIDGKYMCPICHKRFASKANVQRHMLLHTREKLECATCFRQFVKPGHYERHLLTHSTEKRFKCEECGKMFRTTSNLEQHKRIHLAVKPFECQQCLRQFAVKANLIKHQSKGKCRRPREEPIICTVCNKTFKKEFLLKSHLRRHTTERPYVCDKCDMSFKYKSTLIRHVQLHNGIKPYSCKVCRKKFTHAGLIKPHMRRHTGEKPYACPICNKLFAHKHNMQRHTLRHAKIKHLVCDVCNKTFPKESRLKYHMRTHTKAKPFLCAVCPKTFSHRQNIIRHYSRKHPNDTYNCKDTDASVAKDVWEKVKNRNLEIKVDFCEVKIEISDNSDDEILANFKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00723346; iTF_00160051; iTF_00213783; iTF_00247415; iTF_00897120;
90% Identity: iTF_00723346; iTF_00160051; iTF_00247415;
80% Identity: -