Basic Information

Insect: Brenthis hecate
Gene Symbol: -
Assembly: GCA_951806755.1
Location: OX638266.1:3166026-3181806[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 7.7e-05 0.0062 17.4 2.2 1 23 417 439 417 439 0.97

2 20 0.0056 0.45 11.5 0.7 1 20 445 464 445 467 0.94

3 20 2.1e-05 0.0017 19.2 5.4 1 23 486 508 486 508 0.98

4 20 0.00018 0.014 16.2 4.7 1 23 514 536 514 536 0.99

5 20 3.4e-05 0.0027 18.5 5.3 1 23 542 564 542 564 0.97

6 20 1.8e-05 0.0015 19.4 9.6 1 23 570 592 570 592 0.97

7 20 7.2e-07 5.8e-05 23.8 2.9 1 23 598 620 598 620 0.97

8 20 9.8e-05 0.0079 17.1 6.7 1 23 626 648 626 648 0.97

9 20 0.00022 0.018 15.9 5.6 1 23 654 676 654 676 0.97

10 20 0.00049 0.039 14.9 0.6 1 16 682 697 682 699 0.95

11 20 4.6e-05 0.0037 18.1 8.1 1 23 751 773 751 773 0.98

12 20 2.4e-05 0.002 19.0 6.6 1 23 779 801 779 801 0.98

13 20 2.2e-06 0.00018 22.2 4.7 1 23 807 829 807 829 0.98

14 20 3.4e-05 0.0027 18.5 6.3 1 23 835 857 835 857 0.97

15 20 1.1e-05 0.00088 20.1 7.4 1 23 863 885 863 885 0.98

16 20 2.9e-06 0.00024 21.9 6.0 1 23 891 913 891 913 0.98

17 20 3e-05 0.0024 18.7 7.8 1 23 919 941 919 941 0.97

18 20 4.2e-06 0.00034 21.4 4.1 1 23 947 969 947 969 0.96

19 20 0.00078 0.062 14.2 0.2 1 23 976 998 976 998 0.96

20 20 0.012 0.97 10.5 7.0 1 23 1009 1031 1009 1031 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	7.7e-05	0.0062	17.4	2.2	1	23	417	439	417	439	0.97
2	20	0.0056	0.45	11.5	0.7	1	20	445	464	445	467	0.94
3	20	2.1e-05	0.0017	19.2	5.4	1	23	486	508	486	508	0.98
4	20	0.00018	0.014	16.2	4.7	1	23	514	536	514	536	0.99
5	20	3.4e-05	0.0027	18.5	5.3	1	23	542	564	542	564	0.97
6	20	1.8e-05	0.0015	19.4	9.6	1	23	570	592	570	592	0.97
7	20	7.2e-07	5.8e-05	23.8	2.9	1	23	598	620	598	620	0.97
8	20	9.8e-05	0.0079	17.1	6.7	1	23	626	648	626	648	0.97
9	20	0.00022	0.018	15.9	5.6	1	23	654	676	654	676	0.97
10	20	0.00049	0.039	14.9	0.6	1	16	682	697	682	699	0.95
11	20	4.6e-05	0.0037	18.1	8.1	1	23	751	773	751	773	0.98
12	20	2.4e-05	0.002	19.0	6.6	1	23	779	801	779	801	0.98
13	20	2.2e-06	0.00018	22.2	4.7	1	23	807	829	807	829	0.98
14	20	3.4e-05	0.0027	18.5	6.3	1	23	835	857	835	857	0.97
15	20	1.1e-05	0.00088	20.1	7.4	1	23	863	885	863	885	0.98
16	20	2.9e-06	0.00024	21.9	6.0	1	23	891	913	891	913	0.98
17	20	3e-05	0.0024	18.7	7.8	1	23	919	941	919	941	0.97
18	20	4.2e-06	0.00034	21.4	4.1	1	23	947	969	947	969	0.96
19	20	0.00078	0.062	14.2	0.2	1	23	976	998	976	998	0.96
20	20	0.012	0.97	10.5	7.0	1	23	1009	1031	1009	1031	0.99

Sequence Information

Coding Sequence: ATGAATTCGGATCaccataatattaatacgggtGGTGGCCAACCACCAGGCAATTCTGAGTCTCAGAACCAAAGAGTTCAATCGACACAGCAACAACAGCAGGCACAGACGAATAATTTAACTCCTACAACATCTGCTACTGATTTGAGAGTGAACTCGGCGGCGGTAAACGTAGCTTTGTCGAGCGTGGCTAAATACTGGGtgtttacaaatttatttcctGGTCCATTGCCTCAAGTTTCCGTGTATGGATTACCCACTGGTGCAAGAATTGAAAATGGAAAGCCTGTACAGGATCTTGGTCAAGCTCATGCAAGTATTTTAAATGGAGATCCTAACATTATATTAGGACATGCTGGACAACCTCAAGTTACAGTTTCAGCAGCAGGTCAACAAATACCTGTATCACAGATCATTGCAAACCAAACTACACAAGGGCatgatACTCTGGTGGGGCATAGCCAACAACAAGAAGCAGCAGCTGGCAGCACTCCTCTAGCAGTAGCTCAAACCCAGCAGGTACCCAATAATCGGGTCGAGTTTGTACAACACCATAACATTGATATGGGTCACCACTCGCAACAGCATATCATGCAGCAACAGCTCATGGCAGCTGCGCGACCTGAGCACGCGAATCAACAGATTCAACTGACGGTGAGTGAAGATGGCATCGTAACAGTGGTGGAGCCCGGCGGGGGCAAGCTCGTAGACAAGGAAGAACTGCACGAGACTATCAAAATGCCCACCGACCACACACTTACTGTGCACCAGCTACAGCAGATTGTTGGGCATCATCAGGTCATCGATAGTGTAGTGCGCATAGAACAAGCGACGGGTGAACCCGCTAATATTCTGGTTACGCAAAACCCAGATGGCACTACCTCAATAGAAACTAGCGCCGCCGATCCACTTTTAATTAAAGATGAGAAGAATGTCGCCAAGATTGAATCCGCCCAATTTGCTATACCTGCTGAAATAAAGGACATTAAAGGAATAGATTTAAAGAGTGTTGGAGCAATGGGAATGGAGGGAGCAGTTGTTAAGATTTCTACTGGAACGGAACATGATTTGCAGCATGCTATGTACAAAGTAAATGTTGAAGATCTCTCACAACTCCTCGCTTATCATGAAGTATTTGGAAAACTTAATACTGAGGGCCAACCACAAACTAAGacagTAATAAATGAGGTTGAAGTAGAGGCCGGCACTAGCGCGGCCATGTCTGAGGCGGAGTCATCTCCTGGACACCATTCTTGCGACATTTGCGGGAAGATTTTCCAATTTCGATATCAACTTATAGTACACAGACGATATCACGGAGAAAGCAAGCCATTCACATGTCAAGTTTGCGGTTCAGCATTTGCTAATCCAGTCGAATTATCTAAACACGGAAAATGTCACTTAGCCGGCGACCCCGCCGAGCGTCAAGCGAAGAGGCTCGCACAAGACAAGCCGTACGCGTGCTCCACTTGCCACAAGACATTCTCGCGCAAGGAGCACCTCGACAACCACGTGCGCAGCCACACGGGGGAAACTCCTTATAGGTGCCAATTCTGCGCGAAAACGTTCACACGCAAGGAGCACATGGTGAACCACGTGCGCAAGCACACGGGCGAGACGCCGCACCGCTGCGAGATATGTAAGAAGAGCTTCACGCGCAAGGAGCACTTCATGAACCACGTCATGTGGCATACGGGTGAAACGCCGCACCATTGTCACATTTGCGGCAAGAAGTATACTAGAAAGGAGCATTTAGTGAACCATATGAGATCACATACAAATGACACACCGTTCAGATGCGATCTATGCGGGAAGTCCTTCACGAGGAAGGAACACTTCACCAATCACATATTGTGGCACAcggGCGAAACCCCACACCGTTGCGACTTTTGTTCCAAAACATTTACACGTAAAGAGCACTTGCTGAACCACGTGCGTCAGCACACGGGCGAGTCGCCTCACCGTTGCAACTTCTGCGCCAAGTCCTTCACGCGGCGTGAACACCTCGTCAACCACGTGCGCCAGCACACCGGGGAGACGCCCTTCCAATGTGGTTACTGTCCTAAAGCCTTCACTAGGAAGGATCATTTAGGTAAGtccaaatgtatgtatttatgtattcattcagccctttttaacgctccactgctgggcacgggcctcccttcaatacgagggggatcaggccatagtccaccacgctggccaagtgcagTAAACCACGTCCGTCAGCACACTGGAGAATCCCCACATAAATGCACTTTCTGTACGAAGTCTTTCACGCGTAAAGAACATTTAACAAACCATGTGCGGCAACACACCGGGGAGTCCCCGCATCGATGTACATACTGTGCTAAATCCTTTACGAGAAAGGAACATCTTACAAATCATGTTAGACAGCATACAGGCGAGACTCCCCACAAGTGCACGTACTGCCCGCGCTCGTTCTCGCGCAAGGAGTATCTCAACCAGCACCTGCGCCAGCACACTGGCGACGCGCCGCACACCTGCACCTACTGCAATAAGAGCTACACCAGAAAGGAGCATCTAGTTACGCATGTCCGACAACATACTGGGGAGACGCCGTTCAAGTGCACCTACTGTTCGAAGTCGTTTTCACGCAAGGAACACCTAACTAACCATGTGCACATGCACACTGGTGAAACGCCACACAAGTGTCCCTTCTGCACCAAGACATTCTCAAGAAAGGAACACTTAACTAATCACGTCAGAATACATACGGGCGAGTCGCCACATAGATGCGATTTTTGCAACAAAACATTCACAAGAAAAGAACATCTCACCAACCACTTGAAGCAGCATACGGGCGACACGCCGCACGCCTGCAAAGTTTGTTCGAAGCCTTTCACGAGGAAAGAGCATCTTGTTACTCATATGAGATCCCACAGTTGTGGTGAGCGGCCATATATTTGCGGGGAATGCGGAAAATCATTCCCTCTGAAGGGAAATCTGCTGTTTCATGAAAGGTCCCACAATAGAGGCGCAAACGCGGCTAACAAGTCGTTCCGTTGCGATATTTGCTCCAAAGAATTTATGTGCAAAAgTCATTTATCATCACATCGGAGAACCCATACAGAAACTGGCGAAGGTACAACGAATACAGAAACAACTGCTGAAACTGAAGACTGTGGAGATTGTACTAAATGTGAGAAAGAGTCACCTGAAAGACCTGAGAGAAAACATGATACTAGagCATCATCTGAAAGCAGAACTACTGAAGCGAATCCTGCACAAAGTCCGTCATCAAACTCGACCGTAATGCAAATTACCAGTCAGCAGGTACGGACAGGCACAGTAACAAGTGCAGCAAGTGTATCAACTGGCACATTCACAGCGAGCACCCAACATCACGCGACGACGAGTATATCCCATCATCCTGTCACAGTGAACTACTAG
Protein Sequence: MNSDHHNINTGGGQPPGNSESQNQRVQSTQQQQQAQTNNLTPTTSATDLRVNSAAVNVALSSVAKYWVFTNLFPGPLPQVSVYGLPTGARIENGKPVQDLGQAHASILNGDPNIILGHAGQPQVTVSAAGQQIPVSQIIANQTTQGHDTLVGHSQQQEAAAGSTPLAVAQTQQVPNNRVEFVQHHNIDMGHHSQQHIMQQQLMAAARPEHANQQIQLTVSEDGIVTVVEPGGGKLVDKEELHETIKMPTDHTLTVHQLQQIVGHHQVIDSVVRIEQATGEPANILVTQNPDGTTSIETSAADPLLIKDEKNVAKIESAQFAIPAEIKDIKGIDLKSVGAMGMEGAVVKISTGTEHDLQHAMYKVNVEDLSQLLAYHEVFGKLNTEGQPQTKTVINEVEVEAGTSAAMSEAESSPGHHSCDICGKIFQFRYQLIVHRRYHGESKPFTCQVCGSAFANPVELSKHGKCHLAGDPAERQAKRLAQDKPYACSTCHKTFSRKEHLDNHVRSHTGETPYRCQFCAKTFTRKEHMVNHVRKHTGETPHRCEICKKSFTRKEHFMNHVMWHTGETPHHCHICGKKYTRKEHLVNHMRSHTNDTPFRCDLCGKSFTRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCNFCAKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLGKSKCMYLCIHSALFNAPLLGTGLPSIRGGSGHSPPRWPSAVNHVRQHTGESPHKCTFCTKSFTRKEHLTNHVRQHTGESPHRCTYCAKSFTRKEHLTNHVRQHTGETPHKCTYCPRSFSRKEYLNQHLRQHTGDAPHTCTYCNKSYTRKEHLVTHVRQHTGETPFKCTYCSKSFSRKEHLTNHVHMHTGETPHKCPFCTKTFSRKEHLTNHVRIHTGESPHRCDFCNKTFTRKEHLTNHLKQHTGDTPHACKVCSKPFTRKEHLVTHMRSHSCGERPYICGECGKSFPLKGNLLFHERSHNRGANAANKSFRCDICSKEFMCKSHLSSHRRTHTETGEGTTNTETTAETEDCGDCTKCEKESPERPERKHDTRASSESRTTEANPAQSPSSNSTVMQITSQQVRTGTVTSAASVSTGTFTASTQHHATTSISHHPVTVNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00247403;
90% Identity: iTF_00160037;
80% Identity: -