Bhec007471.1
Basic Information
- Insect
- Brenthis hecate
- Gene Symbol
- -
- Assembly
- GCA_951806755.1
- Location
- OX638254.1:4919761-4922052[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.6e-07 0.00018 21.6 0.0 17 41 1 25 1 28 0.92 2 2 7.1 2.9e+03 -1.5 0.0 17 28 567 578 560 578 0.80
Sequence Information
- Coding Sequence
- atgGGTATTAGGGAAGCCTGTCGGATATATGGCGTACCAAAAACAACAGTACATGATCGTATTTCAGGCAAAGTTGCCAATAATAAGAAACCAAAAGTTGGCCCTGACCCTATTTTAGGTAGTGAGGgagaagaaaaattaaaaacttgggTACTGGACATGGCTAAATGTGGctttccaataaataaaaaagagttACTCGAAAGCGTTGCTAATATAGTACGAGATACGAACATTAAAAATCCATTCAAGGATGGTGTTCCTGGAGACACATGGTATTATAATGGTTTAAGACGTCATCCCGATGTAAATGTTAGAGAGCCGGAGGGAATAAATAATGCACGAGCAGCAGTAACGGAGAATCGCGTCAGGTTCTGGTTTAAGGACCTAAAAGAATATATGAAATCCATTGACGCGCTAGATGTATTTGATGATCCTACAAGGATATTTAATGGAGACGAGACGGGGTTTTCACTTTGCCCAAAAAGTGGGAAAGTTTTAGGACCAAGAGGCTATAAGAACCTGTACATAATTAAGAAAACCAATGATAAAGAGAACATCAGCGTCTTGATTGTATTTTCGGCAGATGGTAAAATATGTCCACCTTTGGTCATATTCCCCTATGTCAGACCGCCTAAGACCCTCATTGAAAGTATGCCTCCGACATGGATTCTTGGAAGATCTGAAAGTGGATGGATGAAAAGTGATGTGTTTTTTGAATACATTAGTAATAGTTTTCATACTTGGCTGAttaagaatgaaataaaaaaacctgtgCTCCTTTTTGTTGATGGCCATAAGTCTCACATGACCTATGCTCTCAGCCAATTCTGTGAAACAAATGGGATAATCCTATATGCCTTACCACCAAATACAACCCACATGCTTCAACCGGCAGACGTGAGCGTCTTTAGACCACTGAAACAAGAGTGGAAAAAGACGGTTAAAAACTGGCAAGCTCGTGATGAAAATGTAAACCAAAcggtaacaaaaataaatttttgcaaAATTCTTAACGAGACCCTGACTAATATCGACCTGAGAAATGCCATAGTTAATGGATTTCGCAAATGTGGGCTGTACCCATTAAACGAAGATGCTGTGGACTACACGAAATGCATTAAAGATATACAACAACGAAAAAGGGTTTCTAACACCAATCAAAAAACTATTTCTGGTAGAGACTACGATACAGCCACAAAAGTGATTACCCAAATTAAAGAAGAACTCTCCAGGCACAGCGTTGATACCAAAGTAGTTCTGGCTGAAATAGAAAAAGCGAAGATGAAATATATTTCGAATCGCCGTTCCAAATCGAAGACACCACGAACTTCTGCAACATCGAATGTAAGCACAAGTATATTGGTTGAAGATCTACTACCAATGTCTGCCTCCTCTCCCAAACAGGATATACAGAACGCCGAATTAAGAACTGACGCAAGTCTATATATAGAGAAAGAAGATTCTGGAGTCATGAATTTCCTTGATCCGGGATCATTTATATcacttaataatatatctattttgccAATAGGTGAAGTTGAGATCTCCCAAGATAACTCAATGCTTGATAACTTTGCAAACAACCAATCTATCTCTTTAACTACAGTAGCAGAAATACACAACAAGAATGATTTTGCTGAAGCCGATCACCATCAACCTCCACCTAGGGATGTTTTAGCAGCAATTACAGATAATGTCTCTTTAAATCCAGCAGCAGATACCTACAATGTGAAAGATTTCGTGGAAGCAGAAAACCAACAACCTCCAGTAGTATCACTTAcagataatataacttttaccaCTACAACATCTTTTGATGAAGTCTTTGAAAAACATCTCCGTTTTCCAGAATCTGAATCTTCATCAGCACCAAAAGCAAGAACTGGTCTTAAACTTCCGAGTGCGATTTCTTCAGGCGCCTGGAGAAAATTCTAcgaaaacaaagaaaaagaaaataaaataataactaagaaAATTAAACAAGTATTAAGAGCAGATGCAAAAGAAAAGAAAGCTAAGGAGAAAGATAGTAAAGTCAAAGAAAAGAAGAAAGTAACAGTCAGGAGCACCTCAAAGAAGATGTTAAGAAGATCGTGccaaaataaagcaataaaatgtagCCAATGTTCTGATGATTTGATCAGCGACGTAGAAGATGACGCTGAAAAAAATATCGGTTGCGACCATTGTGCAAGGTGGTTTCACTTAAAATGCACAGTTTTAAAACAAACTCCGTACGTTGAAGCTGCCCAATCTGATTATACTTGTCCATTTTGTAAACACCAGTAA
- Protein Sequence
- MGIREACRIYGVPKTTVHDRISGKVANNKKPKVGPDPILGSEGEEKLKTWVLDMAKCGFPINKKELLESVANIVRDTNIKNPFKDGVPGDTWYYNGLRRHPDVNVREPEGINNARAAVTENRVRFWFKDLKEYMKSIDALDVFDDPTRIFNGDETGFSLCPKSGKVLGPRGYKNLYIIKKTNDKENISVLIVFSADGKICPPLVIFPYVRPPKTLIESMPPTWILGRSESGWMKSDVFFEYISNSFHTWLIKNEIKKPVLLFVDGHKSHMTYALSQFCETNGIILYALPPNTTHMLQPADVSVFRPLKQEWKKTVKNWQARDENVNQTVTKINFCKILNETLTNIDLRNAIVNGFRKCGLYPLNEDAVDYTKCIKDIQQRKRVSNTNQKTISGRDYDTATKVITQIKEELSRHSVDTKVVLAEIEKAKMKYISNRRSKSKTPRTSATSNVSTSILVEDLLPMSASSPKQDIQNAELRTDASLYIEKEDSGVMNFLDPGSFISLNNISILPIGEVEISQDNSMLDNFANNQSISLTTVAEIHNKNDFAEADHHQPPPRDVLAAITDNVSLNPAADTYNVKDFVEAENQQPPVVSLTDNITFTTTTSFDEVFEKHLRFPESESSSAPKARTGLKLPSAISSGAWRKFYENKEKENKIITKKIKQVLRADAKEKKAKEKDSKVKEKKKVTVRSTSKKMLRRSCQNKAIKCSQCSDDLISDVEDDAEKNIGCDHCARWFHLKCTVLKQTPYVEAAQSDYTCPFCKHQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00213386;
- 90% Identity
- iTF_00248016;
- 80% Identity
- -