Bhec014277.1
Basic Information
- Insect
- Brenthis hecate
- Gene Symbol
- -
- Assembly
- GCA_951806755.1
- Location
- OX638264.1:1667408-1668612[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.4e-09 9.5e-07 28.9 0.1 2 39 49 86 48 91 0.91
Sequence Information
- Coding Sequence
- ATGTCGCGACAAAAGGGCTCATGTGATGTCGCCAGTGCGACATCTTTCATTGTGGGATGCGGTTGTGACACcacgaataataaaaaacccGTGAGTTACAaactcACAGCAATCACAATGCCTCCCGAACGAGCATTATGGTCTGAAAATGACTTGGTGTTGGCTGTTCGAGCGGTAGAAAGAGGAATACTGAGCACCTATAAAGCTGCTGAGAAGTATAAAGTTCCCAGAAGAACCATTAGGATTCATATTCAGACCGGCAGTAGAAGTGCTAAGCAGAAACAAGTAAGCTGGTACTGTCATAGTTGTAAAGAGGGTAAGATGGCAGATATAAGGCAATGTGCTAAATGCGGCAAGTGGTATCAAGAGGAATGTGTTGGTTTGTCAGCAGATGATAGGGACACTTTTGAGTGTCCTGACGGCTGTTAA
- Protein Sequence
- MSRQKGSCDVASATSFIVGCGCDTTNNKKPVSYKLTAITMPPERALWSENDLVLAVRAVERGILSTYKAAEKYKVPRRTIRIHIQTGSRSAKQKQVSWYCHSCKEGKMADIRQCAKCGKWYQEECVGLSADDRDTFECPDGC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00248008;
- 90% Identity
- iTF_00248008;
- 80% Identity
- -