Bhec005962.1
Basic Information
- Insect
- Brenthis hecate
- Gene Symbol
- -
- Assembly
- GCA_951806755.1
- Location
- OX638252.1:21841263-21841676[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.1e-09 2.9e-06 27.4 0.0 4 39 13 48 10 53 0.91 2 2 8.5 3.5e+03 -1.7 0.0 34 44 120 130 119 131 0.81
Sequence Information
- Coding Sequence
- ATGGCGAAGAGAAGGTACGGTACTTGGAAGCAAGAGGATACGGACGAAGCCTTAGAGAAACATCAGGATGGAGAAATTGGATTTAATGAAGTTTGTAGAAGATTCAATATACCGAAGCCTACTCTGCGACGATATTTGAAAGGTTTgaataaaagaacaaaatttGAAAGACCTAATGAAATGTCACCAGACATGGTAGAGTTATTAGCACAGCATTTAATGAATTTAGAGTCTTGTTTCTTCGGATTATCATCTATCGGCACTGAATTTAGGAAACTTCCCTTCGAGCCCGCTGAAAAATTTGAACTACCTTATCGTTTTAACAAGGAGAAGAAAATTACAGGCAAAAAGTGGTATTACAGGTTTATAAAAGAACATCCTACTTTGTCGTTGCATGTTCCAGAACCTCAATAG
- Protein Sequence
- MAKRRYGTWKQEDTDEALEKHQDGEIGFNEVCRRFNIPKPTLRRYLKGLNKRTKFERPNEMSPDMVELLAQHLMNLESCFFGLSSIGTEFRKLPFEPAEKFELPYRFNKEKKITGKKWYYRFIKEHPTLSLHVPEPQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00248009; iTF_00248011;
- 90% Identity
- iTF_00248009; iTF_00248011;
- 80% Identity
- -