Bhec016103.1
Basic Information
- Insect
- Brenthis hecate
- Gene Symbol
- clz9
- Assembly
- GCA_951806755.1
- Location
- OX638268.1:1520318-1528202[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1e-09 4.1e-07 30.1 0.1 1 38 14 52 14 56 0.92
Sequence Information
- Coding Sequence
- ATGCctcgtacatatattaaaaaaaaaattgcgccGTACACGCAGGAGGACATGGCCAAAGCGATTCAAGCAGTAGTTAAAGGCGAGATGAATATGTATGCTGCTGCCAAAATATTTAGAATCCCAACAACAACTCTATTtggtagaataaaaaaaaattctagagCTCCAAAAGTTGGCAGACCATTAGCTATACCATTATCATGCGAACAACGATTGGCGGATGCTATGGCAACTATGGAAAAGTGGGGGTTTGGTCTAACGAGACAGGAGGTATTAGCAATTGTTGCTGAGtatgttaagaaaaataatttaagcactCCCTTTAACGATAGTAAGCCGGGGCCTGATTGgttcataaattttaagaaaaggcATGGGCTCTCTATAAAAAAGCCCCAACCAATAGAATAcatgagaaaaaaaatgacaGATCCTTTTATAATATCTGACTTTTTCACATTACTAGAAAATACTTTGACTGATTTGAACTTATTTAAGAAACCAGATCTAATATGGAACTTAGACGAAACCTCTCTGTGCCTAGACCCGACGAAGACCAAAGTAGTTGGTAAAATTAATAAGCCTTGTTCGAGGACAACATGTGGGACcggaaaagaaaatattaccgTCTTAGCGGCCGTGAGTGCAActggaaaaaaaattactccTTTGATCGTATATAAAGGGAAACAGATGTGGGATCAGTGGATGGCAAAATTAGAAGGTTTTGATTTTGAAATATCATATGCAGCAAGTTCAAGAGGGTGGATGGAGacgaacatattttataattatcttgaAAAAATTTTGATTCCTGCACTCGGTAAAGAACGCCCAGTTCTATTAATTTTTGATGGCCATTCTACCCACGTAGACGCTAACGTTGTAGAACTGGcagtcaaaaataatatcacAATTTTAAAGCTTCCCCCTCATACTTCGCATTTACTACAGCCACTTGATGTGGCTgtgtttaaatcttttaaaagcaTGTGGGATAAGAAATTAGTTGAGTGGCAGCGGCATAATGTAGgtaaaaaaatgccaaaaaatgtttttgcgcAAACATTTGCTGAGACCTGGCAAAAAATTAACACTGTAGTTATTCAAAATGGATTCAAAAAATCCGGGATTTATCCATTTAATCGGAATATAATTCCAAATGACAAATATGAACCTGCTGcacttaaaagatataaaacacAGGTATGTAGAACTCCAAAATCACTTAGGTCTTTATGTATTGAAGTTCTAAATAGTAAAAGTAGTATCACAAGTAGTACTATTGACATCAATGATCCACTCAAAGAAGAAACTTTTCATATATTGACAAATACACAGCTTAACACTGAAAATGTCACAATGTTAAGTGATCTTTCTGATAGGAAAGACAGTCAATTACTACCATTTACGGCAAGTCAAACGGCAAGTTTACCACAATGCTTGCAAGAGGAGAAAGAGAGTTCTGTAGTGAGTTTCGAAGAACttgtattagaaaaaatacaacaggGTAAACATAATATTCCGTTCAAAAGAAAAAGAGTTGCTAAAGGAGCTGAAGTAATTACactcaacattttaaaaaataataaagaaaaagagcAGTTAGAGAAACacgacaaaaaactaaaaaagcctAAAACAAAGTTAGAAAGTATGCCCAGTTCTTCGAAATCCCTCAACACATctttcaaaacaattaaaaggcGACCGAGTGTTTATTCAATCAGCGGCTTAATGACTgatgatattttaaacattaatgaaaatatttccgATTTTGATATAGTGGCATGGGCTGATTCAGATGCTATTAATATGGATAATGAATtgaacaaagaaaatatatccGAATATAATTTAAGCCAAGCACATCTAGAAATAGAAAAAGACCAATACATTAAGAAAACTTTTTGCTCAAGACGTGAAGAATATGAAAAACCCATTACGATTTTAGACGAAAAAATAGGATGTATTCGATCTGAACTAGTGGCAGCTAGCAATGACTACGATGAACCAAAAAAGAATAAGAGAAcaaatgcaaataatataaCTACTCAACGAGAAGcacttacttatataaaaaaagacacATGTAAACAAAGAACCAGAAAACTTAAGAAACAGAAAAAGTGGGAAAATAGCTCGACCACTTCAGAAGATAATATTATGAGCGTCCATAGCGACAGTGATATAGATGAAATATTGAGCATAGATGACGGCGAAGAAGAtgaacagataataaaaaataaagttgataTGAAAGAAGCCATTATATTCGAAAATATTAGACGATTAGAGGAGATCGATAAGACTGTACAACTACATAAAACTGCGAGCGAATCTAAAATTGCAAAAAAGATGATGAATACTAAAGAAGAAGAATGTTTTTAtgaggaaaataataatatagaAGATAAGGATAATTTACCATACCTACTGGCCAAATGCGGCGGACTTCAGACGTCTTTAGAAAACTAG
- Protein Sequence
- MPRTYIKKKIAPYTQEDMAKAIQAVVKGEMNMYAAAKIFRIPTTTLFGRIKKNSRAPKVGRPLAIPLSCEQRLADAMATMEKWGFGLTRQEVLAIVAEYVKKNNLSTPFNDSKPGPDWFINFKKRHGLSIKKPQPIEYMRKKMTDPFIISDFFTLLENTLTDLNLFKKPDLIWNLDETSLCLDPTKTKVVGKINKPCSRTTCGTGKENITVLAAVSATGKKITPLIVYKGKQMWDQWMAKLEGFDFEISYAASSRGWMETNIFYNYLEKILIPALGKERPVLLIFDGHSTHVDANVVELAVKNNITILKLPPHTSHLLQPLDVAVFKSFKSMWDKKLVEWQRHNVGKKMPKNVFAQTFAETWQKINTVVIQNGFKKSGIYPFNRNIIPNDKYEPAALKRYKTQVCRTPKSLRSLCIEVLNSKSSITSSTIDINDPLKEETFHILTNTQLNTENVTMLSDLSDRKDSQLLPFTASQTASLPQCLQEEKESSVVSFEELVLEKIQQGKHNIPFKRKRVAKGAEVITLNILKNNKEKEQLEKHDKKLKKPKTKLESMPSSSKSLNTSFKTIKRRPSVYSISGLMTDDILNINENISDFDIVAWADSDAINMDNELNKENISEYNLSQAHLEIEKDQYIKKTFCSRREEYEKPITILDEKIGCIRSELVAASNDYDEPKKNKRTNANNITTQREALTYIKKDTCKQRTRKLKKQKKWENSSTTSEDNIMSVHSDSDIDEILSIDDGEEDEQIIKNKVDMKEAIIFENIRRLEEIDKTVQLHKTASESKIAKKMMNTKEEECFYEENNNIEDKDNLPYLLAKCGGLQTSLEN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00247985; iTF_00247990;
- 90% Identity
- iTF_00247990;
- 80% Identity
- -