Bhec009666.1
Basic Information
- Insect
- Brenthis hecate
- Gene Symbol
- -
- Assembly
- GCA_951806755.1
- Location
- OX638256.1:4145552-4147786[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.2e-10 4.9e-08 33.0 0.1 1 42 12 53 12 56 0.88
Sequence Information
- Coding Sequence
- ATGGAAACCAATAAGAAGCGACGTGGTGAGTGGACTGAACAACAGCTTAAATCAGCTATTGAATCTGTAAAAAACTGCAGTATGTCACAACGACAGGCAGCAGCTACTTTCAGTATCCCAAGAAGAACTTTGAGAAACCACCTAAAATCTGGCAGTGAAGAAAAGAGAACTGGTCGAGCAACTACACTAAGTAATGTCCAAGAAAAAGATTTAGCAAGACGAATAATACGATTAGCTGAAGTAGGCGTGCCGTTGACCCGCAAGATTGTAAGAAAGCAAGCCTACTTATTTTGTAAATCACataaaataccaaattctttCAATGACAGCAGATGCACTGCAGGCAGAAAATggctaaaaaattttttaaaacgtaACCCTGAAATTTCTGTCCGTAAAGCACAGTTTATGAATTCTGCAAGagctcaaaaattaaataaacacatcgTGCAACAACATTTCACAGCTATCAAAAAGTTGTATGACGAATTAGATATTCCTCGACATCCAGAAcgtctatataatatagatgaAAAAGGTTGTCGGCTAACCTTGCATCACCAACAATATGTTCTTGCACAAAAAGGAAACAAGAGAGTGCATTTTATTGCACAAGAACATGCTGAAAACGTCACAATTGCAATGTGTGTAAACGCTTCAGGTAATTCGGTTCCACCAATGATCATTTTCAAAGGTAAAAGGTTAAGACCGGAATTCAACGACAATTTACCTGATGGCACTATAGTCAGAATGGCACCAAAAGGTAGTATGACTactgatttatttattgattttatacatCATCTTGGCAACTATAAGTCTCCCGGGAAATGTTTGCTAGTTTTTGATGGAGCTGCTTCTCATCTGGATGCTAGGATAGTGGATGCCGCAGATGAGAACAACATAGTATTATATTGTCTGCCATCCAATACCACTCATGAATTGCAACCTTTAGACAAATCGGTCAATAAATCCTACGAGCACCATTGGGATGAAGAAGTATTGTTGTACGCCTATCGTCATCCAGATCGTAAGCTCACAAAGGCaagatttaacaaaatattctcAAAGGTATGGCCTAAATGCGTAActcaagataatataaaaaacggtTTTAGAGCTACTGGGCTTCACCCCTACAACCCAAATGCGATTCCCGAGCAGGCTTTTGCACCTTCTATCCTCACTCAGCGGCCTATTTTGCATGAAACTGCTTCTAACTCAGACGATCCTGAAGCTCAAAATTTTGAAGAGTCAGCTGTGTATCACAATAATGACTCTAACACAGACTGTGAAGAAAGTTTACGTATATCGCCGTCACTGATAACTGAATATGTACATGTATCTCCACCACTTTCATCTCATTCTCAGCCACAGAGTCAATCGCCAACTTACGCAAGTAGGAAATTAGTTGACTACAGTTCCTCTTCCGAATCTGCTATTGGAGATATTGATGAACAACTTTCAGCAACAGGCACAATTTTATGTGATAGGGAGTCACAATTTCATTCTCCAATTCCAAGCACGTCTGGGTTAGTAAGACAGAATGTACTACGAAGACCAGTTATCAATTCTTCGGCATCAGGTTCAGACGacgaaaatattgatataaacgTAATCCAAAAATGCTGTCAACATTCTGCCAGGAACTGTAAGATTTATACATCATCAGAATCTGACGAAGAAAATCTGGATCCATCTAATGCAACAGCTGCCCACACACACCAAGAGACACTACGCATCAGACACGAGGAACATAATTCTGATGATTCTGACTATGAGCCGCTATCAAATTTGaagcaaaataagaagaaaacACAAAAGAGATCTCCATTTCACGAATTTATACCAACACCTAACTTTGCAACCATTAAGAGTAAACCAAGGCGAAaagctataaattatattggtCAAAGAGTAACGAAGGATTTGTTTGATGCTGTCCAAGAAAAAAAAGTTAGGGGACCAAAATcagcaaaaactaaaaacacttgtaaaaaacaaaatattatgaaaaagttaaaatataaaaaagtaaatgtagAAAATAGGGGTTATGGGAGAGGGGCAAAAACAAGAGAAGATAAAGCTGAAAGGTGGTATTGCCGAGCTTGTAAATCGGAACGAATCGTAGATATGAGACAATGCATTGCTTGCCTTTCGTGGTACCACGAAGAATGTGTCGGACTTACTAAAAACGACATAGAGGACTTTTTGTGTCCAGAATGCAACTAG
- Protein Sequence
- METNKKRRGEWTEQQLKSAIESVKNCSMSQRQAAATFSIPRRTLRNHLKSGSEEKRTGRATTLSNVQEKDLARRIIRLAEVGVPLTRKIVRKQAYLFCKSHKIPNSFNDSRCTAGRKWLKNFLKRNPEISVRKAQFMNSARAQKLNKHIVQQHFTAIKKLYDELDIPRHPERLYNIDEKGCRLTLHHQQYVLAQKGNKRVHFIAQEHAENVTIAMCVNASGNSVPPMIIFKGKRLRPEFNDNLPDGTIVRMAPKGSMTTDLFIDFIHHLGNYKSPGKCLLVFDGAASHLDARIVDAADENNIVLYCLPSNTTHELQPLDKSVNKSYEHHWDEEVLLYAYRHPDRKLTKARFNKIFSKVWPKCVTQDNIKNGFRATGLHPYNPNAIPEQAFAPSILTQRPILHETASNSDDPEAQNFEESAVYHNNDSNTDCEESLRISPSLITEYVHVSPPLSSHSQPQSQSPTYASRKLVDYSSSSESAIGDIDEQLSATGTILCDRESQFHSPIPSTSGLVRQNVLRRPVINSSASGSDDENIDINVIQKCCQHSARNCKIYTSSESDEENLDPSNATAAHTHQETLRIRHEEHNSDDSDYEPLSNLKQNKKKTQKRSPFHEFIPTPNFATIKSKPRRKAINYIGQRVTKDLFDAVQEKKVRGPKSAKTKNTCKKQNIMKKLKYKKVNVENRGYGRGAKTREDKAERWYCRACKSERIVDMRQCIACLSWYHEECVGLTKNDIEDFLCPECN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00247994;
- 90% Identity
- iTF_00247992; iTF_00247991; iTF_00247994; iTF_00247995;
- 80% Identity
- -