Bhec014439.1
Basic Information
- Insect
- Brenthis hecate
- Gene Symbol
- -
- Assembly
- GCA_951806755.1
- Location
- OX638264.1:4488223-4492126[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.6e-13 1e-10 41.6 0.1 1 40 31 70 31 74 0.92 2 2 9.7 3.9e+03 -1.9 0.0 7 15 189 197 188 197 0.89
Sequence Information
- Coding Sequence
- ATGACTTCCCCAAGACCCGTCTTATTGATGCCTTCTGGGAGAAATAAACTTAaacatactattaaaaataagagGACTCATTTCCAATATACTGAAGAAGCATTGGCACAAGCAGTCCAGGCCATAAGAACAGAAAATAAAAGCATCAGAGAGGCCTGCCGTCACTATGGTGTCCCTCGCTCAACAGTTCAAGATCGAATTTCCGGCAGATCTAAAGAACAACCTCGAAAAGTAGGTCCAGAGACTATACTAGGCATTGATGGTGAGCAAAAAGTTGTAGACTGGATTACAGAATTAGCCAAGTGGGGGATTCCTGTGAGCAAAGAGGTATTGCTGGAAAAtgttgcaaaaataattaaaaatattggaagAGAAAATAAGTTTCCAGAAGGGCGACCGGGACGGACATGGTACCAAAATTTTCTTAGAAGGCATCCGGAGATTAGCGTACGTGAACCTGAAAGTATTAATAAAGCCAGAGAGGCGGAACACCCATGCTCCCCCGCAAGTCTTGCGCCATCCTCGCGCCATGCGCCGTTTCTACCATGCCCTGTAGTAGTAGTCGAAGCTTTATTTGACTGTGTTAGgggatga
- Protein Sequence
- MTSPRPVLLMPSGRNKLKHTIKNKRTHFQYTEEALAQAVQAIRTENKSIREACRHYGVPRSTVQDRISGRSKEQPRKVGPETILGIDGEQKVVDWITELAKWGIPVSKEVLLENVAKIIKNIGRENKFPEGRPGRTWYQNFLRRHPEISVREPESINKAREAEHPCSPASLAPSSRHAPFLPCPVVVVEALFDCVRG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00247972;
- 90% Identity
- iTF_00247972;
- 80% Identity
- -