Bhec001036.1
Basic Information
- Insect
- Brenthis hecate
- Gene Symbol
- -
- Assembly
- GCA_951806755.1
- Location
- OX638249.1:16638562-16639134[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.5e-13 6.2e-11 42.3 0.1 1 40 22 61 22 65 0.93 2 2 5.3 2.2e+03 -1.0 0.0 2 14 144 156 143 157 0.82
Sequence Information
- Coding Sequence
- ATGCCTTCTGGGAGAAATAAACTTAaacatactattaaaaataagagGACTCATTTCCAATATACTGAAGAAGCATTGGCACAAGCAGTCCAGGCCATAAGAACAGAAAGTAAAAGCATCAGAGAGGCCTGCCGTCACTATGGTGTCCCTCGCTCAACAGTTCAAGATCGAATTTCCGGCAGATCTAAAGAACAACCTCGAAAAGTAGGTCCAGAGCCTATACTAGGCATTGATGGTGAGCAAAAAGTTGTAGACTGGATTACAGAATTAGCCAAATGGGGGATTCCTGTGAGCAAAGAGGTATTGCTGGAAAAtgttgcaaaaataattaaaaatattggaagAGAAAATAAGTTTCCAGAAGGGCGACCGGGACAGACATGGTACCAAAATTTTCTTAGAAGGCATCCGGAGATTAGCGTACGTGAACCTGAAAGTATTAATAAAGCCAGAGAGGCGGTCAGAGAGAGCTTAATCAGAAAAacgataaacaaaaacaaaaagataaacgaaaaaaataagaGGAAAGCGGACAGAGAACAAAAAAAACGAATCGAATCCGAAAAAACTTAA
- Protein Sequence
- MPSGRNKLKHTIKNKRTHFQYTEEALAQAVQAIRTESKSIREACRHYGVPRSTVQDRISGRSKEQPRKVGPEPILGIDGEQKVVDWITELAKWGIPVSKEVLLENVAKIIKNIGRENKFPEGRPGQTWYQNFLRRHPEISVREPESINKAREAVRESLIRKTINKNKKINEKNKRKADREQKKRIESEKT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00247972;
- 90% Identity
- iTF_00247972;
- 80% Identity
- iTF_00247972;