Bhec008950.1
Basic Information
- Insect
- Brenthis hecate
- Gene Symbol
- Ubx
- Assembly
- GCA_951806755.1
- Location
- OX638255.1:9836241-9850666[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 3.6e-06 0.0015 18.7 0.0 2 39 56 93 55 97 0.95 2 3 8 3.3e+03 -1.6 0.1 29 38 247 256 247 258 0.86 3 3 1.4e-07 5.5e-05 23.3 0.0 4 38 313 347 310 351 0.92
Sequence Information
- Coding Sequence
- ATGGCGCATGCTCTCTGTCTCACGGAACGACAAATCAAAATTTGGTTCCAAAATCGAAAGATGAAATTAAAGAAAGAAATACAAGCGATAAAGGAGTTAAATAAACAAGAGAAACAGGTGCAAGCGCAGAAAGCAGCGGCGGCGACGGCTGCCCAGAGCCATCTCAACGAAAGTTTAAAAAAAGCTGTTGCTTGCGTTATCAATGAAAACTCTTCTTTAAAAGGGGCGGCAAAACTGTATGGATTAAATGTTATGACTCTAAAACGATATGTCAGAGCTAAGAAAGCGAATTTAACCGTTATATTCGTCGAAAACAAAGATGGGAAACGTCTGGCTGTATTTGAAGGTTACACGTACTACTCGTGTGATAGATTCCGAGCACAGTTTAGCTGCAGCATGTGGAGATGTACTAAAGGATATCCTTGCAAAGCGAGGTTTAAAGCAACTCATAATGGGGAATTATTAAGAATAACCTCCCTCGAACACAATCACGACCCCCCACGTATAGAAATTCATAATGTATTATATCTTATCAATAAGTCTGGGAAAAAAACTGCACTCCTGGACGGGCACAGCTTCTATTATGACGGTAGATGGCAATGCACTAGAACTCGATGCAAATCAAGATTCATCACAACAAAAAATGAAGAAATGATACGCTTGTGCTTCGTTCGAAACAAAAGTGGTAAAGAGTTGGCAATATATGGTGGTCACAGCTTTTACTGTGGCGCCCGATGTTCCAAGACAACTATATGGCGCTGCACTCGTTGGGGTTTGTGTAAAGCGAGATTCATCATGAATTATGAAGGAGAACTCATAACTGCACATTTGGAGCATATCCACAAACCACCAACTTTTGTTATACgaaaaataACACCAATAAAGATTATACAAATGGAGAAAGTTATTAAACCGAAAAAGAAATATCACGAAAAGCAAATGAAAAATGCGGTAGAAGCCCTAAACCGAGGCATGAGTATGAAGTTAGCAGCCAAGACATTTCGCGTCCCCCGAACAACATTACGTGTCAGATTCAAAAATCAAGATAAAGATGGAAAGCCAGGTGCACCTACATTGCTGAGTAAGAAGGAAGAGGAAAGCTTAGTAAATTTCATTCTTCAACATTGGAAGAGTCGTTCATGTAAAAGAAGAGAAGTGACATTTGTGAATAACACATTAGGAAAACCAATGGCAGTGATACAAGGCTTCACTTACTACTGTTCATCTAAAAGCAGTCTATCAATATCTTGGCGTTGTACTAGAGGAAAACCTTGTAAGGCCCGATTTGCTACAAGCccctatttacaatatattcgGGGAGTCACTGAACATAACCACGGGCCACCGAGATTTATAATACGAAATGTTCATTGGGTACAAAATGAACGAGGCAAGCTGCTGGGGCTTATCAATGGATTCACGTTTTACACTAACACCAAGAACATCACTTCGATTTTATGGAGATGCTGTAGAAGTGGTCAGTGCAAAGCTCGTTTGGTGACTACGTATGATCTTAAAATTGTCAGATGCAATTTAGAGCACAATCATGAACCTCCCAAATATGTTATAAGAAAAGGCATTTATTGCAAACTTTAA
- Protein Sequence
- MAHALCLTERQIKIWFQNRKMKLKKEIQAIKELNKQEKQVQAQKAAAATAAQSHLNESLKKAVACVINENSSLKGAAKLYGLNVMTLKRYVRAKKANLTVIFVENKDGKRLAVFEGYTYYSCDRFRAQFSCSMWRCTKGYPCKARFKATHNGELLRITSLEHNHDPPRIEIHNVLYLINKSGKKTALLDGHSFYYDGRWQCTRTRCKSRFITTKNEEMIRLCFVRNKSGKELAIYGGHSFYCGARCSKTTIWRCTRWGLCKARFIMNYEGELITAHLEHIHKPPTFVIRKITPIKIIQMEKVIKPKKKYHEKQMKNAVEALNRGMSMKLAAKTFRVPRTTLRVRFKNQDKDGKPGAPTLLSKKEEESLVNFILQHWKSRSCKRREVTFVNNTLGKPMAVIQGFTYYCSSKSSLSISWRCTRGKPCKARFATSPYLQYIRGVTEHNHGPPRFIIRNVHWVQNERGKLLGLINGFTFYTNTKNITSILWRCCRSGQCKARLVTTYDLKIVRCNLEHNHEPPKYVIRKGIYCKL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00247952;
- 90% Identity
- iTF_00247952;
- 80% Identity
- iTF_00247952;