Basic Information

Gene Symbol
kn
Assembly
GCA_951806755.1
Location
OX638253.1:5138951-5146100[-]

Transcription Factor Domain

TF Family
COE
Domain
COE domain
PFAM
AnimalTFDB
TF Group
Helix-turn-helix
Description
This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 2.3e-17 2.8e-13 49.5 0.1 218 250 2 34 1 35 0.96
2 3 4.4e-32 5.6e-28 98.1 0.1 335 387 33 85 32 92 0.97
3 3 1.3e-07 0.0017 17.2 3.2 421 508 94 186 86 238 0.69

Sequence Information

Coding Sequence
ATGGTCGACGGCCCACTGCTCGCGATATCGGACAACATGTTTGTACACAACAATAGCAAGCACGGAAGACGTGCGAAACGTCTTGACCCTACTGAAGCAGCTCTCAACGAGCCAACAATAGATTATGGCTTCCAAAGACTTCAGAAACTTATACCGAGGCATCCCGGTGATCCTGAGAAATTACCTaagGAGATAATCCTGAAGCGAGCAGCGGATCTGGCGGAAGCACTGTACTCCATGCCGCGCAACAACCAGCTGGGGCTCGGCCCGCGCTCGCCGCCCGCCAGCATGCCCTTCAACTCGTACACCGGCCAGCTGGCCGTCAGCGTGCAGGACACCACCGCCTCGCAGTGGACTGAAGGTGGGATTTTTCTTTTAGAGGAGTACGCGCGTAGTGGAGGCTCAGTGTCGCCCCGCTACTGCTCCGCCGCGTCCACGCCGCACGCGACCTACCCGCAGCACTACGCGCCGCCCACATCGCTCTTCAACACCACCACGCCGTCTCTAGGACCGTACCATCCCAACAACATGAACGGACATTTATCCAATCACTATACCTATAACAAACACGGCGAGAATTATACTGAGAGAAATGATACTAAAAACGACTGTCCAGAAAATTCCCATTCAAAATCTATGAAAGAAAATAAAGAGGCCAAGAGAAGTGCATTCGCAGTTGTAAGACACAGTCCGCCCACTTTCCAACATCAAAACTGGCAACACCTCACCGTCCAATGTTAG
Protein Sequence
MVDGPLLAISDNMFVHNNSKHGRRAKRLDPTEAALNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLGLGPRSPPASMPFNSYTGQLAVSVQDTTASQWTEGGIFLLEEYARSGGSVSPRYCSAASTPHATYPQHYAPPTSLFNTTTPSLGPYHPNNMNGHLSNHYTYNKHGENYTERNDTKNDCPENSHSKSMKENKEAKRSAFAVVRHSPPTFQHQNWQHLTVQC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00247775;
90% Identity
iTF_00247775;
80% Identity
iTF_00247775;