Basic Information

Gene Symbol
Xbp1
Assembly
GCA_951806755.1
Location
OX638257.1:11877031-11878911[+]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.6e-17 1.9e-14 53.9 13.7 2 63 44 105 44 107 0.94
2 2 0.00023 0.27 11.7 0.4 32 54 88 110 87 113 0.90

Sequence Information

Coding Sequence
ATGAGTGCACCGATAATCATCACCGTTCCCAACAATTATCTGGCGGTGGATGAGTTGGAGTCAAAGGTCGTGGTCGACGTGGCTCCTAGTCCATCGTCCAGGAAACGGAGGCTGGACCATCTAACATGGGAGGAGAAGATGCAAAGAAAGAAACTTAAGAACCGTGTAGCGGCGCAAACATCGCGCGACAGGAAAAAGGCAAAAATGGACGAAATGGAAAGCAGAATCAAGCAATGTATGGACATGAACGAGCGGTTAGTCAGTGAGGTGGAGAGTTTGAAGGCGTTGAATGAACGCCTACTGAGCGAGAATGCGGCGCTACGTAGCGCGGCCGCGGCGCGGGACGTCACGGAAGCCCCAAGACCAGCAGTGTCTTATCCTCAGCAGAAGGAGGGGCCCCCGATGGCGAGCCGCGCGGCGCGCATGCTGATGGCGATACTGGCTCTCTCGCAGAATTACTCGCCCACCTCGACTCCCCTGAGTACCTTGACACCCTTCACGAACTTGCAGATTCACTCCTCAAAGAAATTACTGCAAATTCTCCAGGAGAGGATAAACATGTCGAAAGCAGGAGTGATTCACAATGCGATCAAGGAAGAGAAGTGGTGGGGACCTCAGCAAAGCAACTGGAATCCGGTGAAAGTGGAATCCTAA
Protein Sequence
MSAPIIITVPNNYLAVDELESKVVVDVAPSPSSRKRRLDHLTWEEKMQRKKLKNRVAAQTSRDRKKAKMDEMESRIKQCMDMNERLVSEVESLKALNERLLSENAALRSAAAARDVTEAPRPAVSYPQQKEGPPMASRAARMLMAILALSQNYSPTSTPLSTLTPFTNLQIHSSKKLLQILQERINMSKAGVIHNAIKEEKWWGPQQSNWNPVKVES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00722774;
90% Identity
iTF_00722774;
80% Identity
-