Basic Information

Insect: Brenthis daphne
Gene Symbol: Zfa
Assembly: GCA_947093115.1
Location: OX352478.1:16066307-16076796[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 2.8e-05 0.0021 18.8 0.7 1 23 294 316 294 316 0.99

2 10 0.0061 0.46 11.4 0.8 1 23 323 345 323 345 0.98

3 10 3.8e-07 2.9e-05 24.6 2.9 1 23 379 402 379 402 0.93

4 10 0.00095 0.072 14.0 1.1 2 23 409 431 409 431 0.96

5 10 4.1e-05 0.0032 18.2 0.4 1 23 445 467 445 467 0.97

6 10 1.7e-05 0.0013 19.5 0.5 1 22 473 494 473 498 0.94

7 10 5.9e-05 0.0045 17.7 2.8 1 23 506 529 506 529 0.98

8 10 5.1e-05 0.0039 17.9 0.2 1 23 535 558 535 558 0.95

9 10 1.4e-06 0.0001 22.9 0.2 1 23 567 589 567 589 0.98

10 10 0.013 0.97 10.4 0.0 1 23 595 618 595 618 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	2.8e-05	0.0021	18.8	0.7	1	23	294	316	294	316	0.99
2	10	0.0061	0.46	11.4	0.8	1	23	323	345	323	345	0.98
3	10	3.8e-07	2.9e-05	24.6	2.9	1	23	379	402	379	402	0.93
4	10	0.00095	0.072	14.0	1.1	2	23	409	431	409	431	0.96
5	10	4.1e-05	0.0032	18.2	0.4	1	23	445	467	445	467	0.97
6	10	1.7e-05	0.0013	19.5	0.5	1	22	473	494	473	498	0.94
7	10	5.9e-05	0.0045	17.7	2.8	1	23	506	529	506	529	0.98
8	10	5.1e-05	0.0039	17.9	0.2	1	23	535	558	535	558	0.95
9	10	1.4e-06	0.0001	22.9	0.2	1	23	567	589	567	589	0.98
10	10	0.013	0.97	10.4	0.0	1	23	595	618	595	618	0.97

Sequence Information

Coding Sequence: ATGGAGGATACTATAAAGAACAAATTAGAACATTGTTTAGGATGCCTAAATCTTAATGAAGAAATTAATTTACAATGTTATAAGCTGCAAATTGAAAACTTGAAAACTTTATTTCAGGTTGACTGTCTAAAATTATGCTATATTTGTAAAAAACTTATGCGAAAGGCTGAATATTTCATTAAGAATGTTGAGAGTAATCAGATATTTATGCAGAACTTCTCAAATATTACAGATACAACAAATAAAACAGTGAAAAGCAAATTTCAAACAACACGAACAGAACAATTAACATTAGATAAAAGTGAATTTAGTGATGAAAATGATATAGAAGAGCCTAGTTGTACAGTTTACAGCCGAGGTTGGGATAATAAAATAAAAATTGAATATAAAGAAGAAAGCATAAATGATTTGGAAGGAGATTTTACAGATTATTTAGATATTCAAGACCAATCTATCAAAGGAGAATCTGATTCTAATGACAATTCAATAAAAGAAGAAAGTACAGAACTAGATGATATAAATTTAAATGAGTTGCGAAAAACATTGAAAAGTCATAAAGTAAAGAAAAAAGGACATAAAAGAGACAGTAAAAACAACATAAATTTCAAAAACTCAACAATTAAAGGAGAAGATAATTTTTCGTTTAAAAACTTAGTGAAGGAAGAGAATACTGAACTAAGTGATATAAAATTAAGTAAACATAGAAGAAAATTGAAAAGGACTAAATTTAAAAGTATAAGTACTAAAAGTATAAGTACTAAAAGTATAAACATATCTGATAATCTAGATCTAGTTGTAGTCGCATTAAATATAACACGGGAACAATGTATGGTAGAGCGTTCGAAAATGTTGAAAGATCCAAAGTATATGAATTTGGCATACAAATGTGAAGATTGCGTGAAGGGTTTCAATTTTAAAGGAGCGTATGAGAAGCATATGGAAAAACATAGTAAGGAGATGGGTGAATACGAATGTGACATTTGCAAACAGAGAATGGCGACCATGGACAAACTAATGAGTCATCAACGATATCATAGAATACGATACAAATGTATAGAATGCGATCTAATAAGAATAAGTAGGTTGACCATTAAGGATCACTACACAGCGCATCATTTGCAGGACACTTTCCAGTATAAATGCTCACATTGTAATAAAACGTTTAAACGGCAAGTGTCACTGAGAAAGCATATAGCCGACGTACATAGAAGTAAGAAACGGCCTCAGTGTAACTACTGCCAAAGAACCTACGCCAATAAAGAGATTTTGAAGACTCATATGATAAGTAAACATTCATCAGAAGTAACGTCAGGGGAAGTCCCGAGCAAAAAGCATGTTTGTTCGGAATGCGGTGACGCTTTCAAAGCTCCCTCACAGTTGAAGAACCACATGATAAAACACTCTGTGAATAGAAATTATTATTGTGTGGAATGTAATAGAAGCTTCAAATCGAATAATACATTAAAGCAACATTTAAAAATAGCTGCCCCACATGTCAATTATATGGATCTACCCTTCCAATGCAATCACTGCGAAAAAAGATTTAGTGTTAGACGAGACGTCGATCGACACATGAATAGAGTGCATCTAAATATCAAACCATATCAGTGCGATAAATGTGATAAGGCTTATGTGAACGCGTGGTCTCTTACGGAACATTCGAGGTTTGCGCACGAGGGGTATAAACGTCCTTTGAATTTTCCATGTCCGCTCTGTGATAAAGTTTTTGATCGTAACGCAACCCGCAAAGCGCACATCCGGACGCACACCGGCGAGCGGCCGTTCCAGTGCCCGCGCTGCGCCGCGCGCTTCGCGCAGGCCGGCGTGCTCGCCACGCACGTGCGCCTCGTGCACCTGCGCCTGGCGCGCGACGGCCGCCCGCGCCGCGCCGCCGACCCCGCGCGCTAG
Protein Sequence: MEDTIKNKLEHCLGCLNLNEEINLQCYKLQIENLKTLFQVDCLKLCYICKKLMRKAEYFIKNVESNQIFMQNFSNITDTTNKTVKSKFQTTRTEQLTLDKSEFSDENDIEEPSCTVYSRGWDNKIKIEYKEESINDLEGDFTDYLDIQDQSIKGESDSNDNSIKEESTELDDINLNELRKTLKSHKVKKKGHKRDSKNNINFKNSTIKGEDNFSFKNLVKEENTELSDIKLSKHRRKLKRTKFKSISTKSISTKSINISDNLDLVVVALNITREQCMVERSKMLKDPKYMNLAYKCEDCVKGFNFKGAYEKHMEKHSKEMGEYECDICKQRMATMDKLMSHQRYHRIRYKCIECDLIRISRLTIKDHYTAHHLQDTFQYKCSHCNKTFKRQVSLRKHIADVHRSKKRPQCNYCQRTYANKEILKTHMISKHSSEVTSGEVPSKKHVCSECGDAFKAPSQLKNHMIKHSVNRNYYCVECNRSFKSNNTLKQHLKIAAPHVNYMDLPFQCNHCEKRFSVRRDVDRHMNRVHLNIKPYQCDKCDKAYVNAWSLTEHSRFAHEGYKRPLNFPCPLCDKVFDRNATRKAHIRTHTGERPFQCPRCAARFAQAGVLATHVRLVHLRLARDGRPRRAADPAR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00212802;
90% Identity: iTF_00160069;
80% Identity: -