Basic Information

Insect: Brenthis daphne
Gene Symbol: -
Assembly: GCA_947093115.1
Location: OX352477.1:21294329-21304992[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 4.8 3.7e+02 2.3 0.7 1 23 641 666 641 666 0.87

2 19 0.26 20 6.3 2.0 1 23 713 735 713 735 0.96

3 19 5.5 4.2e+02 2.1 0.3 6 23 747 765 747 765 0.96

4 19 1.3 97 4.1 0.1 3 23 776 797 774 797 0.93

5 19 3.4e-07 2.6e-05 24.8 0.3 2 23 822 843 822 843 0.97

6 19 0.00039 0.03 15.2 1.8 1 21 850 870 850 871 0.94

7 19 0.051 3.9 8.5 3.5 1 23 1054 1076 1054 1076 0.96

8 19 0.00028 0.021 15.6 2.1 2 23 1083 1105 1082 1105 0.92

9 19 2e-06 0.00015 22.4 1.7 1 23 1111 1133 1111 1133 0.98

10 19 1.5e-06 0.00012 22.7 4.2 1 23 1139 1161 1139 1161 0.99

11 19 0.00054 0.041 14.7 2.1 1 23 1167 1189 1167 1189 0.96

12 19 1.4e-05 0.0011 19.7 4.8 1 23 1195 1217 1195 1217 0.97

13 19 0.034 2.6 9.1 4.6 1 23 1223 1246 1223 1246 0.90

14 19 0.84 64 4.7 0.6 2 23 1315 1335 1315 1335 0.95

15 19 4.2e-05 0.0032 18.2 0.9 1 23 1341 1364 1341 1364 0.95

16 19 2.7e-05 0.0021 18.8 9.4 1 23 1370 1392 1370 1392 0.96

17 19 4.3e-05 0.0033 18.2 0.1 1 23 1398 1420 1398 1420 0.98

18 19 0.00034 0.026 15.3 0.9 1 23 1426 1448 1426 1448 0.98

19 19 0.0012 0.092 13.6 0.7 5 23 1457 1475 1455 1475 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	4.8	3.7e+02	2.3	0.7	1	23	641	666	641	666	0.87
2	19	0.26	20	6.3	2.0	1	23	713	735	713	735	0.96
3	19	5.5	4.2e+02	2.1	0.3	6	23	747	765	747	765	0.96
4	19	1.3	97	4.1	0.1	3	23	776	797	774	797	0.93
5	19	3.4e-07	2.6e-05	24.8	0.3	2	23	822	843	822	843	0.97
6	19	0.00039	0.03	15.2	1.8	1	21	850	870	850	871	0.94
7	19	0.051	3.9	8.5	3.5	1	23	1054	1076	1054	1076	0.96
8	19	0.00028	0.021	15.6	2.1	2	23	1083	1105	1082	1105	0.92
9	19	2e-06	0.00015	22.4	1.7	1	23	1111	1133	1111	1133	0.98
10	19	1.5e-06	0.00012	22.7	4.2	1	23	1139	1161	1139	1161	0.99
11	19	0.00054	0.041	14.7	2.1	1	23	1167	1189	1167	1189	0.96
12	19	1.4e-05	0.0011	19.7	4.8	1	23	1195	1217	1195	1217	0.97
13	19	0.034	2.6	9.1	4.6	1	23	1223	1246	1223	1246	0.90
14	19	0.84	64	4.7	0.6	2	23	1315	1335	1315	1335	0.95
15	19	4.2e-05	0.0032	18.2	0.9	1	23	1341	1364	1341	1364	0.95
16	19	2.7e-05	0.0021	18.8	9.4	1	23	1370	1392	1370	1392	0.96
17	19	4.3e-05	0.0033	18.2	0.1	1	23	1398	1420	1398	1420	0.98
18	19	0.00034	0.026	15.3	0.9	1	23	1426	1448	1426	1448	0.98
19	19	0.0012	0.092	13.6	0.7	5	23	1457	1475	1455	1475	0.96

Sequence Information

Coding Sequence: ATGTCAACGAAACTACACACGTTACGTGGCTCATGTTTATTCCTACTTTTTATATCACAAATAACATGCGATTGGGTAGAAATAGAACAGAATAACTACAAACCGCATCGAAAACTGACCATAAATATTGGCTACGACGACCATAAAAGTCAAGTTGTGCCTCAGTATGAAGAAACTACTAAAGAGAATAAGATTTACAGAAACCATTCAGTGGAAAAACTGTGGAGTAAAGGATTGGTTGATAGAGTGAGCAACATCGGAAACATAAAAAGAATACAAGGGCCCACCGTCAAAACTACCGCAATTAAAGCAAAGCAGGAAGACACTGAGTTTAGTAAGAATGCACCTGCAACGGAAAAAATGGGTGATACACACAAATATCGTGAACGCATAAATATTCCGCAACGGCACTACTATACGAACCGGCCACATATATTACAAGTAAAAAATAATCAAGAAGAAGATTTTCGAATTAAAGAAAGTAAACATGACAAAATTACTAACACTGGTATCAAACTTGCATCAAGTTTTAAGAGTTCAGTTAATAATTTTCAATATGATAATTATAATGAAGAGAAAGATCCTGTTGTCAGTATTAATGCACCAAACAAAGTAAAACAAATGCAAACTCTCCGTAAAAATCTATCCACAAATGAAAAGACAAAAATCCATTCGAACGACGAAAATGATGAATATTACAACTCTAATTACCAAAGAGTTCAAATCGGTCAGCGAAGAACTTCACCAAGACCTAATATTTTCAACATTGAAGAGCTAACTGCGAAAAAACATAAAACAATTAATAAATCACCAAGCATTGAAAACTATAACGTACAAAATCCAGACCAACTTGATGACAATAAATATACCAACTTTTCTTTATCAAGACCGTTTGGAGCATATATTACTAAAACAAACAATACAAATGAAAATCGCAACGATTTCAAAAAACGCCCAATGATTATTAAAACTGATATTAACTCAGTCCCTGCAATAAACAATGAAGAAGATGTACCAGTCCACCACCAGTCAGTGACTGAAGAGATGCCTACTAACTCTGAAGATATATCAAAATCAAAGAAAAAGCATCCGATGGATGGTATGTTGAAACTAATGAAAGTGGTTTCCGATACCATTTACAAAAACACACACAGAAGCTTCAAAAGTAAAGTGAAGTATTTGGAAGGACTGAAAAGCACTATACTGACAACAATAGAAGGCCACGTAGACACTTTATGGCCGGACGATAAGGACCACACACGTCACACCCGCGAGGCCCGAGGGCACCTGGAATTCCCCTCCTCAGAGAGTGCTCTCATGTCGATATCTTTCCTAACATTTGCTGTTTTCCTTATTAAATTGGTTTTGCAAGTGATCCATACATACAAAGACAAGACGATGTTGGTGGCGCCGACAGTGGTGTCAGCAGTGGGACGCGCTGCGAGAGCTATTCATGTGCATGATCTATCGAAAATTTGTCGACTCTGCGGGATAGTCCCACCTGAGCCAGTTATCCCACTGTTCGGGCAAGAATGTCAAAAGAAGCAAATTTCAGAGAAAATAAACCGATATTTGTCTATACAGGTTGATGAAATGGACACACTACCAAAAACAGTGTGCCATAGCTGTGCTCGACTTATTGTAACATGGCACAAATTTGCAAACCGTAGTGTAGAAGTTGAAGCGAAATTAAAACAAAGATGCAATGTACAGCGACAACCTATTTCAACAAATGAACAAAATGCATCAAATTTAAATGAAAACAGCAACAATCAAGCTGTCGATACCTACACATACACTGCGGATTCTTCAAACGGCACGTCACCAGACACATATTTACTTTACTCCACTGTAAAAAACGTGTTGACTGACGATTATTTTAAGGCTTTGGACATTGACGAGGATAACTCTAATTTAGAGTACGTCTGCCAAATATGTCCCGGCAATCCCGCCTCGAGGTCTATCGAACATTTGTGTTCTCATATAAAATCTTCACATTACTCCAAAACTACTGATAAACAGGCCATAGAAGAGTATATAAAGGATAATATAACGTTTGAAGAAGTCCTCGGTGATGACATGATGACTGATGATCATGAACTTGAAAGAGTAAAAGATGTGATAGAATTGCCTAATTTCTTTTGTCCTTTTTGTGACAGTGCTTTTTCATCGCCAACTCGTCTTATATGTCACTTGAACAAACATATTGAGGTTAGCATCGAGGACGGAGTTACGTGTTGTGATAACCACTATCCAGATAAGAAAACCTTTGTCGCCCATTTGCAAAAAGCACACGTAAATAGACAAATTACGGGAAAGGTAATATGCAAAAGCTGTGATTTTACAGCCAACGACATCAATGAACTACAATCGCACATAATCCAAGCTCACCCTGAGAGTAAAGACGATTGCGACAAACCAAAAAAAGATCCGAGTCCAAAAAATCAGAAGTTCATACCAGCAGTCTGTCCCGAATGCGATAAAGTTTTCTCTAATAAATATAACATGCTCGTTCATATGAGAAATCATAATAAATCGACCACCAAGTTTGCGTGCGATAAATGTAGCAAGAGTTACAAAAGCCAAGGGAGCTTGTCTCATCATCAGAAGAGCAAAAAACAGCCTGGACCGGCACATCGACATGCATTTAGATATACGGAAATACGCTTGCCAATTTTGTCCGAAGAAATTCAGAAAACGCACGCACCTCACTTATCATTTAAAGACGCACGAGACGAAATCTCAGTAACCGAAGTTGTTTGTTGCAGATGGTCACCCTACTCGGACCAAGAAGAAAGTTACCGGGACGCTTGTGAGGAAAAAAATATTCGGAAAATTGCTGAATCTGAGAGCGACTCTATCGCTTCAGACGATGAACCTCTCGCGAGCTTGGCAAATAAAACGTCGACTCGAGATTTGTACCAAGACTTTTATAACGCTTTGAAGAAATTTCGGGACCACTTCGTGAATGACCACCGCGGGCAGTGTAACTATTCCGACTTCTCCGACTCGACTGAATCAGACCATGAAGACTTAGAGGAGATGGATCTTAATGATTTCGATGACTTAACGGAGAGTAATATGAGAAAGGACAGAATGGACGAAGAAACTCGGGTCGAGCTAAGTGAAGTGCAGACTAAAATCAACGGCAAAGTGTATTTCACGTGTAAGATATGCGGAAAGAACCTGAGCTCGTCGCACACGTACATCTTCCACAAGCGCATCCACACCGGCGAGCGGCCCTGCGTGTGCCACGTGTGCGGGAAGCAGTTCCGGGTGCCCAACGGCCTGCAGCGGCACTTGACGGAAACACATTTGAAGCAACGGCGGTATATTTGCGTGGTGTGTCACAAGAATTTCGCCAATTCTCAGAACTTGAAACAGCATATGCGCATCCACACCGGCGAGAGACCGTACGTGTGCTCGCATTGCGGCAAGAGGTTTACACAGAGCGGGTCTCTACACGTGCATTTGAAAACCCATACAGAAATCTTTCCTCACAACTGCGCGGATTGCGGCGCGAAGTTCAGGCTACTGTCTAGTTTGAAACGACACAGATTAAAACACACGGGGGAAAGACCACACGTGTGCGTTCATTGCGGGAAAGGCTTCCGACAGAAACATGAGCTCAACAGTCACATTCTGACCCACACGGACACCAAACCCCACGCCTGCTCGGTGTGCGGCGCCGCCTTCCGCCAGCGCCGCGCGCTGCGCCACCATTGCAAGCGCCTGCACGACGCCGACGCGAGGGACCTCACGCTTATGGGCTATAACAACATGCCGCACTACGATTTGTTCAGTAACGTGAAAAAAGAGATAAAATCCGAGACCGCAGATAGTCAGAATTTAGTTGTTAAAAAAGATCAATCTGTCACAAATCAAAAAGAGAACTTAGGAAAGCCACAAACTATTGTAGTAAAAGATGGCAAAAGATATGGAGTGTGTAATATTTGTAAAAAAAATGTGTTGACCGCTTCTTGGAAACGTCATCTACGGTCGCACCAGAGCGTCAAGAGGTTCAGCTGCCACACCTGCGGGCTCGGCTTCAACGACAGCGGCAACCTCTCGCGGCACACGAAAGCCATACATTCCGAGCACCGCCCTCACGCTTGCCATATCTGTCATAAAAAATTCTCTAGAAACAGTCACCTTCAAGATCATATAAAATCACATTCGGATACTAGAGAGTACATTTGCGACGTGTGCGGTAAAGCCTCCAAATCCAGCGCCGCTTTAAGAATGCACAGGAGAATACACGAGAACGACTATAGGTTTCAGTGCATGTACTGCGAGTCTAAATTCAAAAGGCGCGGGCAGCTGACGGCGCACGTGTCGGTGCACACCGGGGAGAAGGCGCACGTCTGCGTCTGCGGCAAGACGTTCCGGCTGAGGAGTCAGCTCACGAGCCACGCGCGCCTCCACGACACAATAGTGCTGTTCGTATCGGCGCTGTTTAAGGCGCAGGTGTCGCGTGCAAAGCCCGACACGTGCCCGCCGCGCCGCGCACGTCTTCGGCTCGCACACATTCTTCCACCTGCGCTGCGACGAGTGCGACGCCTATATAGACAAGCCAGAGTACATATCCCACAAGAGCACGCGTATGAAAAAGCCATGCAGAAGGAGAAACAGGCGAAGAAAATCATCCAGAAAGCTCTGGACGTCAACCTCGCCTGGATAGTCAGAAATGAGTTCTGCAGTTGCGACAATCTCATGTGTAATTTTAGTAGAGAATTAGGATTAAAAGTGTGTTCAACGAATTTCAATCTACTCGAAGAAAACGACGAGGAAACTCCGTCGTTACCTCTAGTGCGGCGCTTCGATAGAGCTCGAAGGTGTCCTTATTGCGACAGCGTGTACAGGTGCACGATCATCTGCTTCCGCCGCCTGACGTACGCAAATGACGAGTCGCATAAAACAAGCGCTTCGTCCAATTCCATGTAG
Protein Sequence: MSTKLHTLRGSCLFLLFISQITCDWVEIEQNNYKPHRKLTINIGYDDHKSQVVPQYEETTKENKIYRNHSVEKLWSKGLVDRVSNIGNIKRIQGPTVKTTAIKAKQEDTEFSKNAPATEKMGDTHKYRERINIPQRHYYTNRPHILQVKNNQEEDFRIKESKHDKITNTGIKLASSFKSSVNNFQYDNYNEEKDPVVSINAPNKVKQMQTLRKNLSTNEKTKIHSNDENDEYYNSNYQRVQIGQRRTSPRPNIFNIEELTAKKHKTINKSPSIENYNVQNPDQLDDNKYTNFSLSRPFGAYITKTNNTNENRNDFKKRPMIIKTDINSVPAINNEEDVPVHHQSVTEEMPTNSEDISKSKKKHPMDGMLKLMKVVSDTIYKNTHRSFKSKVKYLEGLKSTILTTIEGHVDTLWPDDKDHTRHTREARGHLEFPSSESALMSISFLTFAVFLIKLVLQVIHTYKDKTMLVAPTVVSAVGRAARAIHVHDLSKICRLCGIVPPEPVIPLFGQECQKKQISEKINRYLSIQVDEMDTLPKTVCHSCARLIVTWHKFANRSVEVEAKLKQRCNVQRQPISTNEQNASNLNENSNNQAVDTYTYTADSSNGTSPDTYLLYSTVKNVLTDDYFKALDIDEDNSNLEYVCQICPGNPASRSIEHLCSHIKSSHYSKTTDKQAIEEYIKDNITFEEVLGDDMMTDDHELERVKDVIELPNFFCPFCDSAFSSPTRLICHLNKHIEVSIEDGVTCCDNHYPDKKTFVAHLQKAHVNRQITGKVICKSCDFTANDINELQSHIIQAHPESKDDCDKPKKDPSPKNQKFIPAVCPECDKVFSNKYNMLVHMRNHNKSTTKFACDKCSKSYKSQGSLSHHQKSKKQPGPAHRHAFRYTEIRLPILSEEIQKTHAPHLSFKDARDEISVTEVVCCRWSPYSDQEESYRDACEEKNIRKIAESESDSIASDDEPLASLANKTSTRDLYQDFYNALKKFRDHFVNDHRGQCNYSDFSDSTESDHEDLEEMDLNDFDDLTESNMRKDRMDEETRVELSEVQTKINGKVYFTCKICGKNLSSSHTYIFHKRIHTGERPCVCHVCGKQFRVPNGLQRHLTETHLKQRRYICVVCHKNFANSQNLKQHMRIHTGERPYVCSHCGKRFTQSGSLHVHLKTHTEIFPHNCADCGAKFRLLSSLKRHRLKHTGERPHVCVHCGKGFRQKHELNSHILTHTDTKPHACSVCGAAFRQRRALRHHCKRLHDADARDLTLMGYNNMPHYDLFSNVKKEIKSETADSQNLVVKKDQSVTNQKENLGKPQTIVVKDGKRYGVCNICKKNVLTASWKRHLRSHQSVKRFSCHTCGLGFNDSGNLSRHTKAIHSEHRPHACHICHKKFSRNSHLQDHIKSHSDTREYICDVCGKASKSSAALRMHRRIHENDYRFQCMYCESKFKRRGQLTAHVSVHTGEKAHVCVCGKTFRLRSQLTSHARLHDTIVLFVSALFKAQVSRAKPDTCPPRRARLRLAHILPPALRRVRRLYRQARVHIPQEHAYEKAMQKEKQAKKIIQKALDVNLAWIVRNEFCSCDNLMCNFSRELGLKVCSTNFNLLEENDEETPSLPLVRRFDRARRCPYCDSVYRCTIICFRRLTYANDESHKTSASSNSM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -