Basic Information

Insect: Brenthis daphne
Gene Symbol: -
Assembly: GCA_947093115.1
Location: OX352471.1:51205206-51210719[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 37 0.019 1.4 9.9 0.2 1 23 9 31 9 31 0.97

2 37 0.19 14 6.7 0.0 3 23 60 81 58 81 0.93

3 37 0.021 1.6 9.7 0.4 5 23 105 124 101 124 0.90

4 37 0.0083 0.64 11.0 1.9 3 23 131 152 130 152 0.97

5 37 0.00014 0.011 16.6 3.0 1 23 156 179 156 179 0.97

6 37 0.0012 0.092 13.6 2.1 1 23 276 299 276 299 0.93

7 37 2 1.6e+02 3.5 0.8 2 21 327 346 326 349 0.91

8 37 0.054 4.1 8.4 0.4 1 23 371 394 371 394 0.95

9 37 2.1e-05 0.0016 19.2 0.5 1 23 399 422 399 422 0.96

10 37 0.00031 0.024 15.5 1.3 1 23 427 450 427 450 0.95

11 37 0.0053 0.4 11.6 0.3 2 23 456 478 455 478 0.90

12 37 0.0025 0.19 12.6 5.0 1 23 482 505 482 505 0.97

13 37 0.006 0.46 11.4 1.3 2 23 512 533 511 533 0.96

14 37 0.0065 0.5 11.3 3.8 1 23 569 591 569 591 0.98

15 37 0.0019 0.15 13.0 0.9 2 23 662 684 661 684 0.95

16 37 2.2e-05 0.0017 19.1 0.6 1 23 689 712 689 712 0.97

17 37 0.0018 0.14 13.1 0.9 1 23 716 739 716 739 0.96

18 37 0.041 3.1 8.8 2.4 2 20 742 760 742 764 0.94

19 37 0.027 2.1 9.4 1.8 3 21 769 787 767 788 0.93

20 37 0.015 1.1 10.2 0.3 1 21 839 859 839 862 0.90

21 37 2.2 1.7e+02 3.3 0.0 3 23 891 912 889 912 0.94

22 37 0.00016 0.012 16.4 0.1 2 23 935 957 934 957 0.96

23 37 7.7e-05 0.0059 17.4 0.2 3 23 964 985 963 985 0.94

24 37 0.12 9.2 7.3 2.7 2 23 990 1012 989 1012 0.93

25 37 0.0029 0.22 12.4 4.0 1 23 1017 1040 1017 1040 0.97

26 37 8.8e-05 0.0067 17.2 6.8 1 23 1044 1067 1044 1067 0.97

27 37 0.00052 0.039 14.8 0.3 2 23 1074 1095 1073 1095 0.96

28 37 0.57 44 5.2 0.1 1 23 1152 1175 1152 1175 0.96

29 37 0.0062 0.47 11.4 0.0 2 23 1206 1228 1205 1228 0.94

30 37 0.002 0.15 12.9 1.3 2 23 1251 1272 1251 1273 0.95

31 37 0.0049 0.37 11.7 1.5 1 23 1278 1301 1278 1301 0.95

32 37 0.019 1.5 9.8 0.3 1 23 1306 1329 1306 1329 0.94

33 37 0.0072 0.55 11.2 1.0 2 23 1335 1357 1334 1357 0.91

34 37 0.00095 0.073 14.0 0.1 2 23 1365 1387 1364 1387 0.97

35 37 0.017 1.3 10.0 0.4 2 23 1394 1415 1393 1415 0.96

36 37 5.9e-05 0.0045 17.8 5.2 1 23 1421 1443 1421 1443 0.96

37 37 4.5e-06 0.00034 21.3 1.3 1 23 1449 1472 1449 1472 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	37	0.019	1.4	9.9	0.2	1	23	9	31	9	31	0.97
2	37	0.19	14	6.7	0.0	3	23	60	81	58	81	0.93
3	37	0.021	1.6	9.7	0.4	5	23	105	124	101	124	0.90
4	37	0.0083	0.64	11.0	1.9	3	23	131	152	130	152	0.97
5	37	0.00014	0.011	16.6	3.0	1	23	156	179	156	179	0.97
6	37	0.0012	0.092	13.6	2.1	1	23	276	299	276	299	0.93
7	37	2	1.6e+02	3.5	0.8	2	21	327	346	326	349	0.91
8	37	0.054	4.1	8.4	0.4	1	23	371	394	371	394	0.95
9	37	2.1e-05	0.0016	19.2	0.5	1	23	399	422	399	422	0.96
10	37	0.00031	0.024	15.5	1.3	1	23	427	450	427	450	0.95
11	37	0.0053	0.4	11.6	0.3	2	23	456	478	455	478	0.90
12	37	0.0025	0.19	12.6	5.0	1	23	482	505	482	505	0.97
13	37	0.006	0.46	11.4	1.3	2	23	512	533	511	533	0.96
14	37	0.0065	0.5	11.3	3.8	1	23	569	591	569	591	0.98
15	37	0.0019	0.15	13.0	0.9	2	23	662	684	661	684	0.95
16	37	2.2e-05	0.0017	19.1	0.6	1	23	689	712	689	712	0.97
17	37	0.0018	0.14	13.1	0.9	1	23	716	739	716	739	0.96
18	37	0.041	3.1	8.8	2.4	2	20	742	760	742	764	0.94
19	37	0.027	2.1	9.4	1.8	3	21	769	787	767	788	0.93
20	37	0.015	1.1	10.2	0.3	1	21	839	859	839	862	0.90
21	37	2.2	1.7e+02	3.3	0.0	3	23	891	912	889	912	0.94
22	37	0.00016	0.012	16.4	0.1	2	23	935	957	934	957	0.96
23	37	7.7e-05	0.0059	17.4	0.2	3	23	964	985	963	985	0.94
24	37	0.12	9.2	7.3	2.7	2	23	990	1012	989	1012	0.93
25	37	0.0029	0.22	12.4	4.0	1	23	1017	1040	1017	1040	0.97
26	37	8.8e-05	0.0067	17.2	6.8	1	23	1044	1067	1044	1067	0.97
27	37	0.00052	0.039	14.8	0.3	2	23	1074	1095	1073	1095	0.96
28	37	0.57	44	5.2	0.1	1	23	1152	1175	1152	1175	0.96
29	37	0.0062	0.47	11.4	0.0	2	23	1206	1228	1205	1228	0.94
30	37	0.002	0.15	12.9	1.3	2	23	1251	1272	1251	1273	0.95
31	37	0.0049	0.37	11.7	1.5	1	23	1278	1301	1278	1301	0.95
32	37	0.019	1.5	9.8	0.3	1	23	1306	1329	1306	1329	0.94
33	37	0.0072	0.55	11.2	1.0	2	23	1335	1357	1334	1357	0.91
34	37	0.00095	0.073	14.0	0.1	2	23	1365	1387	1364	1387	0.97
35	37	0.017	1.3	10.0	0.4	2	23	1394	1415	1393	1415	0.96
36	37	5.9e-05	0.0045	17.8	5.2	1	23	1421	1443	1421	1443	0.96
37	37	4.5e-06	0.00034	21.3	1.3	1	23	1449	1472	1449	1472	0.98

Sequence Information

Coding Sequence: ATGCCTTTTAAGTGGCGCGGCAAATACGTATGCTTTTATTGCGGGGAAGAACCAAAAACCTATGATGAGTTAAAGGCACATACAAAAGAACATGGAGAATGTTCAGATAAAGATAGAGCTTTACGATTGATAAGAGCAGCTGATGTCGAAGTCAAAATCGACATATCTACTATTATATGTAATCTGTGTAAAATATCGTTTGCAGATTTGGAAGCAATTGTTTCTCACTTAATAGTCACACATAATTTACAATATAATAGAGATGTAAAGTTATCGATAGTGGCATACCGGTTATCGGATTTAAAATGTATTTCTTGTGATGAGAAATTTACATATTTAAGCAAATTAATAAGTCATGTTAATACCGTACATCCCAATCAGAGTTTGCTTTGCTTAAAATGTGGACAAAAGTTTAACAAAAAACGTGACTTAGACGCGCATAATCGTACTAAGCATAGAAGCCAGTACACTTGTATGAAATGTTCTCGAAAATTCTCAACTAGTTCAGATCTCTTAAGCCATAAGAGAAACTCGCATTCATCGAAATGTAATATCTGTTTTAAAAGTTTTCTATCATTCCGAAAATGTGTAGAGCATATTAAAAACGATCATTCTGCCACAACATATAAATGTGGGTTCTGCTTGGATTCAGCCACTACGAAAAAGACTTTTATTAGACATGTTACAGAATGTACGGAAAATATTATGACCGTAGACAATAGACAAAATATAAATAAAAAGCCTTCCGTGACCCAAATTAGAAATAATATAGCGTGCATCTTCAACATGTCTACAGCTATGCCCTTCAAATATTTTATGAGTAGATTTAGATGCTTCTATTGCCCTAAAGACTTCAGTGAATGCGATGACCTCAAACAGCATACAGTAATTGAGCATCCTCTATGTGATACAAAATTAAAATCTATGAAATTACGCCACAGACAAGACGGTCTTATCAAAGTGGACACATCATCGTTATCTTGTAAAATATGCTTTAAGAATTTACAAGATTTAGATGGTTTGATAGAACATTTGAATTGCGAACATAAAATACACTACGATAGATCCGCTTCTGCTAATTTACAACCCTACAAATTAATAAAGGATAATTTCCCATGTCCCTTTTGCGTGGAAATATTTAGATATTTCCGAACGTTACTAAATCACGTGGCTAAGAGTCATTCGGATAATAAATATATATGTGTACATTGTGGGTTGGCGTTTCGGAACTCGCCAAATTTACGTACACATATCGCCCGGCGTCACAAGGCGGCCAGTTTTAAATGTTCCGAATGTGATTTGCGATTTTTTACTAATAACTATTTACAAAACCATTTAGGTCGAGTGCACGGCACTAAAATCGTTGAGTGTCTTGAATGTAAAGAGAAATTTAAGTCTGCATACGAAATGCAGAGGCATAAGATTGATGTTCACAGTTCTGGACACGAATGTTCTTATTGCCACAAGCTATTTACTGGGAAATCGTCCGTTTCCAATCATATTCGACGAACTCATTTAAAAGAGAAAAATGTCGAATGCACTGCTTGTCATGAGAAGTTTTTTGATTCACAAAGCCTGAAAGTGCATATGGTCAAACATTATGATGAAGTCCCGAACGACCTCTGCACTTCTGAGCGCAGACGAAAAAACTTGCAAATACTGTTCAACAACACATCAATAATACCTTTCAAATGGCGGGGAAGATACATTTGTTTTTATTGCGGCCAAAATTACACAGAGTACAAAAGTTTCAGAAAACATACGAAGTCTCATGGACTATGTAGTACAACAGATTACGCCCTGAAACTTATAAAAGGAAATCATATAGAGATAAAAATAGACATTTCAGAAATAACATGTGAAATTTGTTACGAGCCATTAACAAGTTTCACAGAAATAGTAGATCATTTGTCTAATAAACATGATTTGGAATACGACAAAAGTATCGACATTCCCATCCAAGAGTATCAGTTGTCAGAGTGTCGATGTCGAATATGTGGTGAAGAGTTTACGTATTTTGGATACTTAATAACTCACACCAATATCGCTCATCCGCAAAATACTTTTATTTGCGATAATTGCGGCGAAAAGTTTAATAAAAAAAGAGATTTAGCGATTCATATAAGACGTTATCACCAAGATGGTTACCCTTGCGATGAATGCTCAGAAGTGTTCGAATCTCACGCGCTTTTAAGTAAACATAAAAACAATTTTCATTTCAGAAGATGCAAAATATGCGATTCTCGTTTTCCTTCTTACACTCTTCTAAAAAGACATGTGCAATGTGATCATTCAGATGATAACTGCCCGTATTGCTCGAAAAAATGCCAAACCTCACAAGGTCTTAAACAACATATCACGAAATGTAATAAAAAAACTCGCATTAAAATTAAACAACCGTTTGCCGAAGAAACGATGCAACCGAGTAAAAAGAAAAATGTAAATCAAATTAGGAAAAATATATTATGTGTTCTGAATATGTCAACGGCGGTGCCATTTAAATTTTTCACTAAATATTCGTGTTTTTACTGCTCTAAAAGTTACGTTGAGTTTGATGAGCTCAAAGAGCATGTCGTTGCTGCCCATCCCGCTTGCGACATAAAAGAAAAATGCATAAAAAATTGTAAAGGGGAAAGGATTACAGTCAAAATAGATATATCGTCTCTGGCGTGTAGGGTCTGTTATGAGCCCTTAGAAAGTTTAGACAGTCTTATTGATCATCTCATATCAAAACATAAAGCGGAATATGACAAATCTACAACAGGTTGCTTCGAATCGTTCAAAATCGTCAAAGACAATATTCCTTGCCCAATTTGCTCGACGGTTTTTAGATACTTTGGTTCTCTTTTAAGACATATAAATTCTGAACACAGTAATAATAATAAAATATGCGATTTTTGCGGTCGTAGTTTCAAAAACGTTGCTAATTTAAAAGTTCACATAACATACGCTCATACGGGTTCTTGCGAGTGCGATATTTGTGGGTCGAAATACAAAAATCCATGGTGTTTAGGACGGCATAAAGCGAAATCTCATAACGCAAAAGAGTTTCAATGCACAAAATGTCCGGAGCGATTTCAATCTCAATACCATAAACAAAAACATCTAATCAAAGTACACGATATAGGTCATAAATGTTCGCATTGTGGTAAAATGTTCACCAGAAATTCGTTTATGAAAGACCATGTACGTAGGACTCATTTGAAGGAGAAAAATGTACCGTGTACAGTTTGTAATGAGAAATTCTTTGATAATTATTTATTAAGGTTACATATGGTGAAACATAAGGGTGAGAGGAAGTTTAGTTGCGAAGTTTGTGGTACAAAATTGTGTACAGTGGAAGACAAATATAAGAAAACTGAAATGGTGCGTAAACTGTTACTAAAACGTCGCAATGTTGAATACGTTTTGCAATATAGTAATGTTACACCATTCATGTGGTACAAGGGAAGGTACAGATGCTTCTACTGTGCTGAACCTATGAAAGATCCGGTACTTTTACGCGAGCACACAGCTAGAGTACACCAATTTGCTAACTTGGAACTCGTGGTCCATGATCGAACTAAAAATAATAGGAATAAAGATGCTGCAGTGAAAATTGATGTTACAGACATATCCTGTAAATTGTGTCCCAGATCAGTTAACAGTCTAGAACAGCTGATTAACCACTTGATAATAGCTCATGATGCAGAATACGATGTCAGTGTTCCTAACTGCTTCCTTCCTTTTAAGTTAGATAAAGGGCAGCCCACTTGCCCTATTTGTGATATGAAATTCGTCTTCTTCGAGTATCTTTTGCGTCATGCAAATAAACATCACCTATCACACGATTACATATGTGATGTGTGCGGTACAAGTTTTCAAGGGGAGAATCATTTGAAAATGCACAACAGATACTATCATAGGGAAGGGGGTTACACATGCGATATATGTGGTATAAGTTTGTCTACGTTGTCAAAGAAGACGCTCCATGAAAAAAACGTGCACATGGTTAACCTATCTACTTGTCCGCATTGTCCAGAAACTTTTAAAAGTCCATATTTCAAGAAGTTGCATTTAGCAAATGTACATGGTGTTGAAGAGTTGAAAATCAAATGTCCTTATTGTCCAAAAATCTATCCTCAAGAGAGTATAATGTCACGTCATATGAGACGAGTTCATTTGAGGGAGAAGAATGTTGAATGCCACATTTGTGGCGACAAATTCTTTGAACCCTACGATGTTAAATTGCACATGTTGAAGCACAATGGCGATAAAAAGTTTATGTGCTCTTTTTGCGGGAAGAAGTTTTCTAAGAAGAGTAATTTAAATTCACACTCGTGCATTCATACGGGACAGAAAAAGTATGTTTGCTCATTATGTGACAAGGATTTTGCTCACCGATACAATTTAAGTCAACATATACAAACATGGCATCCTCAGAATATGGTGGACCAAGATCAAGATATGGGTGTCACAGACGATATTGATGACAGTGAGCTAGTCGAATTGAATTTTGTCTCGGAATTAGACGGAGAGCAAATTGTGGAAGATGTTGTCTAA
Protein Sequence: MPFKWRGKYVCFYCGEEPKTYDELKAHTKEHGECSDKDRALRLIRAADVEVKIDISTIICNLCKISFADLEAIVSHLIVTHNLQYNRDVKLSIVAYRLSDLKCISCDEKFTYLSKLISHVNTVHPNQSLLCLKCGQKFNKKRDLDAHNRTKHRSQYTCMKCSRKFSTSSDLLSHKRNSHSSKCNICFKSFLSFRKCVEHIKNDHSATTYKCGFCLDSATTKKTFIRHVTECTENIMTVDNRQNINKKPSVTQIRNNIACIFNMSTAMPFKYFMSRFRCFYCPKDFSECDDLKQHTVIEHPLCDTKLKSMKLRHRQDGLIKVDTSSLSCKICFKNLQDLDGLIEHLNCEHKIHYDRSASANLQPYKLIKDNFPCPFCVEIFRYFRTLLNHVAKSHSDNKYICVHCGLAFRNSPNLRTHIARRHKAASFKCSECDLRFFTNNYLQNHLGRVHGTKIVECLECKEKFKSAYEMQRHKIDVHSSGHECSYCHKLFTGKSSVSNHIRRTHLKEKNVECTACHEKFFDSQSLKVHMVKHYDEVPNDLCTSERRRKNLQILFNNTSIIPFKWRGRYICFYCGQNYTEYKSFRKHTKSHGLCSTTDYALKLIKGNHIEIKIDISEITCEICYEPLTSFTEIVDHLSNKHDLEYDKSIDIPIQEYQLSECRCRICGEEFTYFGYLITHTNIAHPQNTFICDNCGEKFNKKRDLAIHIRRYHQDGYPCDECSEVFESHALLSKHKNNFHFRRCKICDSRFPSYTLLKRHVQCDHSDDNCPYCSKKCQTSQGLKQHITKCNKKTRIKIKQPFAEETMQPSKKKNVNQIRKNILCVLNMSTAVPFKFFTKYSCFYCSKSYVEFDELKEHVVAAHPACDIKEKCIKNCKGERITVKIDISSLACRVCYEPLESLDSLIDHLISKHKAEYDKSTTGCFESFKIVKDNIPCPICSTVFRYFGSLLRHINSEHSNNNKICDFCGRSFKNVANLKVHITYAHTGSCECDICGSKYKNPWCLGRHKAKSHNAKEFQCTKCPERFQSQYHKQKHLIKVHDIGHKCSHCGKMFTRNSFMKDHVRRTHLKEKNVPCTVCNEKFFDNYLLRLHMVKHKGERKFSCEVCGTKLCTVEDKYKKTEMVRKLLLKRRNVEYVLQYSNVTPFMWYKGRYRCFYCAEPMKDPVLLREHTARVHQFANLELVVHDRTKNNRNKDAAVKIDVTDISCKLCPRSVNSLEQLINHLIIAHDAEYDVSVPNCFLPFKLDKGQPTCPICDMKFVFFEYLLRHANKHHLSHDYICDVCGTSFQGENHLKMHNRYYHREGGYTCDICGISLSTLSKKTLHEKNVHMVNLSTCPHCPETFKSPYFKKLHLANVHGVEELKIKCPYCPKIYPQESIMSRHMRRVHLREKNVECHICGDKFFEPYDVKLHMLKHNGDKKFMCSFCGKKFSKKSNLNSHSCIHTGQKKYVCSLCDKDFAHRYNLSQHIQTWHPQNMVDQDQDMGVTDDIDDSELVELNFVSELDGEQIVEDVV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00723333;
90% Identity: iTF_00723333;
80% Identity: -