Bdap023055.1
Basic Information
- Insect
- Brenthis daphne
- Gene Symbol
- -
- Assembly
- GCA_947093115.1
- Location
- OX352471.1:50753877-50755055[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.4e-07 7.8e-05 22.7 0.0 1 37 18 54 18 60 0.92 2 2 3.2 1.8e+03 -0.9 0.0 13 23 140 151 137 153 0.70
Sequence Information
- Coding Sequence
- ATGACACGCAAATACGTGCGTAAAGCAGGGGCACGACCTCGAGCGACGTGGACAGAAGATGCCCTTATAGAGGCCTTTGAAGAGCTGAGGCAAAATAAATATGGTATAAATGAAGTATCTCGTCGTTATGGAATTCCAGCCAGAACCTTAAGAAGACGATTTGCTAAACAAGATACAAAAGAAATCACTAATGTCATATTAGTATTTTTTCTGGATTTCGAAAATGAAAAACGGCTTGTCGCACACATCCAAAAACTAGAGACTGCAGGGTTTCCCGTAACACGAGATACGGTACAAAGACTAGCTTTTCAATTCGCAGAAAAACTTGGTATTGAACATAACTTTAACAAAGAAACACGCAAAGCTGGACCTCATTGGCTAAATTCTTTTCTGGAACGCCAACCAAGGCTGAGCGTCCGACAAGCTGAAGGTTTATCTCTTGCCCGAGCTCAGGAATTAAATCGTGAGGAAGTCAACAAAATGTTTAAGCTTTTGCTTCAAATCTTAACGGAGCACGATTTACTAGACAAACGAGATCGTATATTTATTGTAGACGAAACTGGGGTCCAGCTAAACAATAAACCAGGAAAAGTTATTGTTACGAAGGGCACGAAATCAGTACACTCGATTACATCTGGGGAAAAAGGAGAGACTTTTTCGGTAATTGCTGCTTGCTGCAATGCCGCTGGAAATTTTCTCTCCCCAGTAGTAATCATTAAAGGAGTAAATAGAAAGCCAGAATTTCAGGATGGTCTTTCTCTTGGCTCAGATGTCTACATGAGCAAAAAATCGGCTTATGTTAATGCAGAGTTATTCCAGAAGTGGCTATTGGAACATTTTATACCTAGAAAGCCTCAAGGTAAAGTTGTTTTACTTCTAGATGGGCATTCTTCACACACTAACTCTGCTGACATGTTAGAGACCGCAGAAGAAAATGGTATTATACTCTTCTGTTTGCCAAGTCACAGCACGCAAGCTTTACAACCCGTAGACCGTAGTTTTTTTAAGCCATTTAAAACTTTATATGCAGCTGAAACAAAAAAGTGGATGCTTATTAATAAAGAAAAAAAAAAAATCGCTTAG
- Protein Sequence
- MTRKYVRKAGARPRATWTEDALIEAFEELRQNKYGINEVSRRYGIPARTLRRRFAKQDTKEITNVILVFFLDFENEKRLVAHIQKLETAGFPVTRDTVQRLAFQFAEKLGIEHNFNKETRKAGPHWLNSFLERQPRLSVRQAEGLSLARAQELNREEVNKMFKLLLQILTEHDLLDKRDRIFIVDETGVQLNNKPGKVIVTKGTKSVHSITSGEKGETFSVIAACCNAAGNFLSPVVIIKGVNRKPEFQDGLSLGSDVYMSKKSAYVNAELFQKWLLEHFIPRKPQGKVVLLLDGHSSHTNSADMLETAEENGIILFCLPSHSTQALQPVDRSFFKPFKTLYAAETKKWMLINKEKKKIA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01091822;
- 90% Identity
- -
- 80% Identity
- -