Bdap023139.1
Basic Information
- Insect
- Brenthis daphne
- Gene Symbol
- -
- Assembly
- GCA_947093115.1
- Location
- OX352471.1:51339359-51359093[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 6 8.8e-10 4.9e-07 29.7 0.0 4 37 185 219 182 221 0.92 2 6 1e-08 5.7e-06 26.3 0.0 1 36 646 681 646 688 0.92 3 6 0.00027 0.15 12.2 0.0 1 33 707 739 707 743 0.94 4 6 8.4e-09 4.7e-06 26.6 0.0 5 41 801 838 797 842 0.83 5 6 1.5e-08 8.5e-06 25.8 0.0 5 40 884 920 880 924 0.84 6 6 1.1e-09 6e-07 29.5 0.0 1 40 940 979 940 983 0.94
Sequence Information
- Coding Sequence
- ATGAATTACGAAAATGATATTACGTTTTCTGAATATTTGTGTAGATGCAAGTGTTGTTTAAATGATAATGACTTGAAAAGCTTATGGGAAGTTTATGAGTGTGATGATGGCACAGAGGAAATTTATGGACAAATGGTGGTCGATTGTTTCGCGTTACCGTGGTATCCGACAGACGAACCTGAACACATTTGTGAATTTTGTGTGCTAAAACTTCGTGAATCTTTGAGTTTCAAGAAAAACATCTTGGCTGTAGAAGGTGTTTTATTGAATGATGTCAAATTTAAAGAAGAAGCGGATCCCCAAATAGATACTGAAGATGAAAACCTGGTGGTGAAGTATGTTCCAATTGAAGATGAGTATCAGCACGTGGAGTATCTGGAAGTTGAAGAAGCACAGGAAGATAAACTACAGATGAGAAAACTGACGGAATTTGACAATACAAGTTCAGGCCCTTCAACTCCGGGGGCCTCAAACGCGAGCCCTCAAAGGAAATGGCCAAAGAAGAAAAAGAAACACGAACTAACAAAACTATACAAACAGTACACCCAAAATGATTTAAAGGAAGCTATAAAAGCGGTTACAAACGGTGTTATGACATGTACCAGTGCGGCAACAAAGTATGGCATCCCCAAGAAAACTTTGACTGTCAAAGTTAATTCATATGTAGACCGTGAACGTGTCGGACAAACTGAAGATTCCAATGATAAACATTATAAATTAATCGAAGAAATAAAACTTCTCCTCACTCACACCACAGCGGTGCCTTTTAAAACTAAAACGACTCGATATTACTGTTTCTACTGTTCTACAGACGGACGAAATTTTGAAGATACTGATGAACTGAGAGAGCATACGAGGGCTAAACACTCGCATGAGTGGACAAAAATAGAAATGTACATGAGACCTCAATGGTTGAACGAAGTTATTAAATTGGACGTAGAGGATTTACATTGCAAAATTTGCCTAACAATGTTGCCAGATTGGAACAATCTGTTTGTCCATTTGGGTGTAAATCATGACCTCGAGTTTGATATGGCTTATACCAGAATAATACCATATGCTTTGAGCTCTGATCTCAAATGTTTTCTTTGCAAGCAAAATTTTCACAATTTTGGTAATCTCGACAGCCATATGAATAATCATTACAGCAATTATATATGTTATGAATGTGGAGATACTTTTTTGTCAGCGAGCCGTTTAGATAAACATTTGAATGTTCATAAAATAGGTAATTATCCGTGTGATTACTGTGAAAAAGTGTTTAAATTAGAGAAATATAAAGCGAAGCATGTTAGTTTAGTGCATATACAAGAAAGTACAGTGAAATGTTTGTATTGCTCTGAAAAATTTGTAGGCATTTTCCAAAGGCATATCCATGTGACGGAACACCATAAAGAGAAAGTTAAATATATGACATGCGAATACTGTGGGAATAGTTATACATGGAAGCCGTATTTTTTAGCGCATATGAGGAGAAAACATGGTGCTGAGAAAAAGTATAAGTGTAAACATTGTGAAAAATGCTTTTTAATGAAATATGAAttgaaaaatcatatggtgagacatacgggggagaagaatttcatttgtggtctatgtgggttaggttttacgaggatgTGGGAACAACCATCAATAAACTCTGATTCTGATTCAGAACATATTTGTAAAATATGTATATCTAAGTTGCATGACGCTGTAAACTTTAAAAAGGAAATTTTATTGTCCGCACAATTGTTACTGGAAGAAATTAAAAGTGAATCGTATGCTGTGAAGATGGAGGATGATTCTGATACTGACATCGAAACAGAGTATCTGAACATAGAGTTTTTAGAGGATGATGATATTGGAAAAGAAAAATCAGATATTAAAATGGAGTCTCCAACTAAACCAATCCAAGAAGAATTATTTATGAACCAAAAATCAAAAAAATATACAGAAGAGGATCTCAAGAAATGCCTCGAGGCTGTTAAAAGTAAAACTCTGTCCCAATCTAAAGCATCCTTATTGTATAACATACCGAGAAGGACTATTCGAAGTGCCCTTGATAGTATAGAAATGAGTCCCACTAAAGAAATCGATAATGAATTATACCTAAACCCAGCATCCAAATACTTTAAAGAAGATGATTTAAAAAAATGCGTCGAAGAGGTTCAAAATAAAACACTGTCGCAAAATAAACCATCCAAATTGTTTAAAATATCAAGGAGGGTTATCCGTATCCCTCTTGAGAAAACGTCACCTTTAGATAAAAGTATGAAATTTACGGAAAAAGAAAGTATTCAAAGGAATGAGAAAATTAAAGACGAAAGAGAAGATGATAATAAAATGGACTCACCGGAAAGAGATGAATCATTCAATGTTCCAAGGAAAAAAACAAAGAGATATACGGAGGCGGACGTGCAAAAGTGCGTGGAGGCAGTACGAAGCAAGACCCTGTCACAGTGCAAGGCGGCCATCTTGTACAATGTGCCGCGCAAGGCGATACAAAGTGCGTTAAAGAATGAAAGTATAAGTATTAAGGAAAAAGAAGGTAAACAAAAGAATGAAGAAATCACAGACAGTGATGATAATACAATAGATTCACCGGAAAGAGATGAATCATTCAGTGTTCCATGCAGAAAAACAAATAAGTATACGGAAGCAGACGTACAGAAGTGCGTGGAGGCGGTACAGAGCAAGCGCCTGTCACAGTGCAAGGCGTCTGTCTTGTACAATGTGCCGCGGAAGGTGATACATAATGCATTAGTGAGACTTAAATTGGCCTCATCAAGCAACCCGATGGAGTTGATAACTGCCCAAAAGTCCAAAAAATACACAGAAGAGGATTTCAAGAAGTGTTTGGAGGCGGTCAAGAATAAGACCATGTCTCGTGGCCAGGCTTGCACCATTTATAACGTGCCGAGGAGTTCCCTCCATGCCGCTATAGAAAGAAGCCAAAGAAGACAGCTTGACGATAACTCTACATCAGCCTCTGATGAGGAGAGCTTCCAAGCAATTGTTCATGGAAAGAAAGGCACTTTACAAGAGCACGGCGATAATATTACCAACGTCCTCGTCTATACCAACGCCACACCAATACGTCATCATAACGACTTCGGGTTTTCATGCTCATTCTGCTCTCAAACTGTAAAAGCACCTGCTAACAACCAGCAAAACCCTACTTTAAGAACTATTCCAATTGCAAATGAAACTATTTCTTATGCTGAAGTTGCTGCTACAAGCTGTACAACTGCTCAACGCAAAGAGCACACCAAATCTAGTGATAataaactagatgaaattttgaagctcatgacatcatttgacgagcgtcttaaaaaaatagaaaatagcgctaaaaaggctatgccaagacgtcaaaatgattaa
- Protein Sequence
- MNYENDITFSEYLCRCKCCLNDNDLKSLWEVYECDDGTEEIYGQMVVDCFALPWYPTDEPEHICEFCVLKLRESLSFKKNILAVEGVLLNDVKFKEEADPQIDTEDENLVVKYVPIEDEYQHVEYLEVEEAQEDKLQMRKLTEFDNTSSGPSTPGASNASPQRKWPKKKKKHELTKLYKQYTQNDLKEAIKAVTNGVMTCTSAATKYGIPKKTLTVKVNSYVDRERVGQTEDSNDKHYKLIEEIKLLLTHTTAVPFKTKTTRYYCFYCSTDGRNFEDTDELREHTRAKHSHEWTKIEMYMRPQWLNEVIKLDVEDLHCKICLTMLPDWNNLFVHLGVNHDLEFDMAYTRIIPYALSSDLKCFLCKQNFHNFGNLDSHMNNHYSNYICYECGDTFLSASRLDKHLNVHKIGNYPCDYCEKVFKLEKYKAKHVSLVHIQESTVKCLYCSEKFVGIFQRHIHVTEHHKEKVKYMTCEYCGNSYTWKPYFLAHMRRKHGAEKKYKCKHCEKCFLMKYELKNHMVRHTGEKNFICGLCGLGFTRMWEQPSINSDSDSEHICKICISKLHDAVNFKKEILLSAQLLLEEIKSESYAVKMEDDSDTDIETEYLNIEFLEDDDIGKEKSDIKMESPTKPIQEELFMNQKSKKYTEEDLKKCLEAVKSKTLSQSKASLLYNIPRRTIRSALDSIEMSPTKEIDNELYLNPASKYFKEDDLKKCVEEVQNKTLSQNKPSKLFKISRRVIRIPLEKTSPLDKSMKFTEKESIQRNEKIKDEREDDNKMDSPERDESFNVPRKKTKRYTEADVQKCVEAVRSKTLSQCKAAILYNVPRKAIQSALKNESISIKEKEGKQKNEEITDSDDNTIDSPERDESFSVPCRKTNKYTEADVQKCVEAVQSKRLSQCKASVLYNVPRKVIHNALVRLKLASSSNPMELITAQKSKKYTEEDFKKCLEAVKNKTMSRGQACTIYNVPRSSLHAAIERSQRRQLDDNSTSASDEESFQAIVHGKKGTLQEHGDNITNVLVYTNATPIRHHNDFGFSCSFCSQTVKAPANNQQNPTLRTIPIANETISYAEVAATSCTTAQRKEHTKSSDNKLDEILKLMTSFDERLKKIENSAKKAMPRRQND
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00247677;
- 90% Identity
- iTF_00247677;
- 80% Identity
- iTF_00247677;