Basic Information

Gene Symbol
osa
Assembly
GCA_947093115.1
Location
OX352478.1:12907105-12922279[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 5.6e-26 1e-22 80.7 0.0 2 89 259 343 258 343 0.94

Sequence Information

Coding Sequence
ATGTTCTTTGCTACTCGTATCGACGAGAAACTCGACGCACCTCGTTCAAAGGGAATTTTACGACCTAATAAAAGTACGCAGAACGTACCGATGCCACCGCGACCGTCATCGTCTCTATCGGACGGAAGCGGGCCGACGGTGCGTGCGGGCGCGGGCACCGGGCCTCCGCCCTCCGCGGCGCCTCCGCCCGGCGCGATGCTGCAGCAGCCCTACCACCACGGCTCATACAAGCCGGCGCCCTACCCGCCACAGCCGTACCCCTACCCGCCACGCAACCACCACCCGTACCCGTATGGCGGGTACCGACCCACGCCGCCGCCACATCCATCCCAACATTATCCACCGCTCAAGCAAGCGGCCCGGCACATGGGCCCGCCGGGCGACTCGATGCCGCCGCCCACCGCGCCGGGCGAGAGCCACGACAACGGCCCCGCGGCGCCGGCCACCGCGCTCGTCACCACCGGCCCGGACGGCACGCCGCTCGACGAGGGCAGCCAGCAGAGCACGCTCAGTAACGCTTCCGCTGCGTCAGGCGAGGAGCCCTGCGGTACGCCGAAAAGCCGCAAAGAGTACGGCGCGGGCAGTGCGGCGCCGTCGCCGTCGCCGGGCGGCGCGTCGCACTCGTCCGCGCACGACGACTACGACACGACGCCCTCGCCCTGGCCGCGCCCGCCCTCCAGCCCCGTGTTTAACAGTCACATAGCGCCGGAGTCCTACAGATCAAAGAAGTCGGACTCGCTGGGCAAGCTGTACGAGATGGACGACGCGCCGGAGCGGCGCGGGTGGGTGGAGCGGCTGCTGGCCTTCATGGAGGAGCGGCGCACGCCCATCGCCGCGTGCCCCACCATCTCCAAGCAGCCGCTCGACCTGTACCGCCTCTACCTGCTGGTGCGCGACCGCGGCGGCTTCGTCGAGGTGACAAAAAACAAAACGTGGAAGGACATAGCCGGGCTGCTCGGCATCGGCGCGTCGTCGTCCGCCGCGTACACGCTGCGCAAGCACTACACGAAGAACCTGCTTGCGTACGAGTGCCACTTCGACCGCGGCGGCATCGACCCGCAGCCTATCATCAACCAGGTGGAAGCGTCCACCAAGAAGAAGAGCGGCAAGTCGAATAATACGGCTAGTGCAGGGTCATCGAATTCGCAGGAGCAGTTCGGCGGCGGCGGCGCGGGGCAGCCCGCGCCCATGGACGGCTACCCCGCGCACTACGCGCCCTACCCGCCGCAGCCCGCGCAGCCGCAAGGCGGCGGGCCGGGCGGCGACATCGCCGCCTCCAACCCGTTCGACGAGCCGCCGGGGCCCAGGCGACCCCCAGGTTACCAACAAGGTTACGGGTATGAATATGGATCTCCTTATCCGTCGAATAGACCTGTTTACCCACCTTATGGTCCAGAGGGCGACAGGGGTTACGGCACCGGCGAGTACCGGTACAGCTACGGCGGCTACCGAGCGGGCGCGCCGGCGGGCGGCGCCGCGGCCGCGCCCCCCGCGCCCGCGCCCGCGCAGCCGCCGCCTGCCGCGCCCGCGCACCCCGCGCACCCCGCGCAGCCCTACCCGGAGTACTACCGCCCGCCGCACCCGCACCCCCACCACCAGCACCCGCAGCATCCGCAACACCCGCAGCACCCGCACCCGCAGCACTCGCCGCAGCATGAGATCGGCGCGGCGGGCAGCGCGGCCGGCCTGCTGGGCTCGCAGCTGGCGCGCCAGCTCGTGGCGCCGCTGCCGGCGCCCGCCCGCCCCTACGTACGGACGTTTGTACCACGCACTCAACACCGCTTCCCCATTGGCGTTCGGTTCGGCGGGCGGTGTGGCCAACCTACCCGACCCCCCTTCACCCTTTACCCTCACCCTCATCCTGTAGATTAA
Protein Sequence
MFFATRIDEKLDAPRSKGILRPNKSTQNVPMPPRPSSSLSDGSGPTVRAGAGTGPPPSAAPPPGAMLQQPYHHGSYKPAPYPPQPYPYPPRNHHPYPYGGYRPTPPPHPSQHYPPLKQAARHMGPPGDSMPPPTAPGESHDNGPAAPATALVTTGPDGTPLDEGSQQSTLSNASAASGEEPCGTPKSRKEYGAGSAAPSPSPGGASHSSAHDDYDTTPSPWPRPPSSPVFNSHIAPESYRSKKSDSLGKLYEMDDAPERRGWVERLLAFMEERRTPIAACPTISKQPLDLYRLYLLVRDRGGFVEVTKNKTWKDIAGLLGIGASSSAAYTLRKHYTKNLLAYECHFDRGGIDPQPIINQVEASTKKKSGKSNNTASAGSSNSQEQFGGGGAGQPAPMDGYPAHYAPYPPQPAQPQGGGPGGDIAASNPFDEPPGPRRPPGYQQGYGYEYGSPYPSNRPVYPPYGPEGDRGYGTGEYRYSYGGYRAGAPAGGAAAAPPAPAPAQPPPAAPAHPAHPAQPYPEYYRPPHPHPHHQHPQHPQHPQHPHPQHSPQHEIGAAGSAAGLLGSQLARQLVAPLPAPARPYVRTFVPRTQHRFPIGVRFGGRCGQPTRPPFTLYPHPHPVD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00212207;
90% Identity
iTF_00159608;
80% Identity
-