Bodo002095.1
Basic Information
- Insect
- Bradysia odoriphaga
- Gene Symbol
- pnr
- Assembly
- GCA_016920775.1
- Location
- JAFDOW010000935.1:1651268-1704781[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3e-16 6.8e-13 47.8 4.5 1 35 563 596 563 597 0.98
Sequence Information
- Coding Sequence
- ATGAGTAATGTACCGGACAAATTTTATCAAGTGTGTCGGTTGTGCTTGGCGGTGGTCTGTGATAGTGATATTCCCGAATTGTCCATGTATGATATCAACAAAACGCGATCGCTAAATCAACAGATCAACAATACGGTTATCATTAGCAATACACAGAAAGCGGATGAAACGAATCATAAGAACAATTCCCTGCATCAATTGAATGCTGCTGACAATAAGGAATCCATCGATTACAATGCATCCGGATTACACAACGATGGAAACGGTGACGGTGTCGAAGACGACGACGATGAGTCACGCATTGAATTGCACGAACGAATTTACACATTTCTAGCGATTTCGgTGTCACCAACTGATGGTCTACCAGCCGTTGTGTGTAAAAAAtgtagagaccaattggacacATGCCATCGTTTTCGGGAGGATGCACAACGAACACAAAGAAAACTGcagaattttttacaatttgcaAACAAACTCACGGGAAGTCCGCAGGATGTGTTAGCTAAGACATCGGCCAGTCTAAACGAATTGCTGTCACCGTCGTGTCGAAAAGCATCTGAGCATACAGCCGCTGCCGCATTGACCGAACTGCGAAACACTAGCAGCAATCACCAtcaccaccatcatcatcaaaAACAGCAACAGCAAAAAAACCAATCATCATTAGTTACCTCAATACTCAGTAAAAATCATATTAACCATTTGGAAGCTAATTCAGTGTCTGTGATTCCAATCGAAGCGAAAACATCAACGATTGCAAATAATATCCAAACTCGATCcaattcaaatcaacaaaaaccgCCCATCATTCAAATGAAAAGTCTGAGCCAGCTGCAGCAACAATTGGAAACGGCTGCTGTATTGATGGACATCAGCAAGAAAGTAATAATCTCACCACCAAGTTCCAATCCTCAATCGCCCAGCGTACTGGACCAATCTCAACCGCAAAGTATTACTTCAACTGTGATAAATCTAAAACGTTCTACAAGTCTCGAAGAAATGGATTTGTCGGTGAAAAGACAGAAAATTAGTGTCGACGAACAGCCGTCACCGCATCGGGATGGTCGGAAAAACTATCAATCTGCCGATTTAACGGTTATTAAGCGACGCGTTAAAGAGGAAATTCCGGACGAACTTAGCCAGCAAAGTGATAGCAACGATAGTTCCGATCCCGGTAGATTACAGATGGACATAAATTCACAAGATTCAGACGATTCGAAATTCAATCACAAGCAAATCGTTGATTCGGGACGAGAAACACCGGACAGTTTAAAATCAGAAGACCATGGAACGGATCCAGCGACCACACAACTGTGGCAAGCGTTGGCCCGAACGAcagTGAATGGCGGTGGAAATGAAGCTACTCAACTGCTGCGACAAATGATCAATTGTAGATCACTAGGTCTACCGCTTCCATCATCCCTTATAATTACTGGAGGTCATTCAAATGAACCGATGTCACTGATAAAGAATGAGTTGAACTCACAGAAGGCAACTGGCAGACGGAAGCAATCGTGTCCGAGTAAAGCACCTTTCGACAACGCCGATAATGAACCAACAATACCTTCCGATATAGTGACAACGGAATACAACAACGGAAATCATAACTCCTGGTCAAATAATGTCGATGACGGAGGAAAGCATGGAAAGAATTCAAACACTCAACAGCAGAAGGACATGTCTTGCACCAATTGTGGCACATTGACGACAACAATTTGGCGACGTAATCTGCGCGGTGAAATGGTGTGTAATGCGTGCGGCCTTTATTTCAAATTGCATGGAGTTAATCGTCCGCATTCGATGAGACGAGACACTATACATACACGACGGCGACGGCCCAAAGGCGATAAATCTGGCAGACGAAGATCCAAAGCCCATGACAGTTCAATGGAACCGGATGGAATGGATGCTAAAGATCATTCGGATTTGCAAGCACTACAAAACCACAATTTATTAATTGCCTTAGGTGGTGTAGCACGTGGTGGCACACCACATTTTCCAATGTCGCATTACTCACATTTCTTGCGTGCCTCACAAAACTATTCCGATGGATCGGCTGAAGAGGTGCAGTTACCTAGCGGTGAAGAATTGGTTACTGGCGATGACAGCGGACCCGAAAATGATGTCGATGCATCGAATATACCCTTAAATTTAGTGGCTACGCAATTTGCAGCTGATTAA
- Protein Sequence
- MSNVPDKFYQVCRLCLAVVCDSDIPELSMYDINKTRSLNQQINNTVIISNTQKADETNHKNNSLHQLNAADNKESIDYNASGLHNDGNGDGVEDDDDESRIELHERIYTFLAISVSPTDGLPAVVCKKCRDQLDTCHRFREDAQRTQRKLQNFLQFANKLTGSPQDVLAKTSASLNELLSPSCRKASEHTAAAALTELRNTSSNHHHHHHHQKQQQQKNQSSLVTSILSKNHINHLEANSVSVIPIEAKTSTIANNIQTRSNSNQQKPPIIQMKSLSQLQQQLETAAVLMDISKKVIISPPSSNPQSPSVLDQSQPQSITSTVINLKRSTSLEEMDLSVKRQKISVDEQPSPHRDGRKNYQSADLTVIKRRVKEEIPDELSQQSDSNDSSDPGRLQMDINSQDSDDSKFNHKQIVDSGRETPDSLKSEDHGTDPATTQLWQALARTTVNGGGNEATQLLRQMINCRSLGLPLPSSLIITGGHSNEPMSLIKNELNSQKATGRRKQSCPSKAPFDNADNEPTIPSDIVTTEYNNGNHNSWSNNVDDGGKHGKNSNTQQQKDMSCTNCGTLTTTIWRRNLRGEMVCNACGLYFKLHGVNRPHSMRRDTIHTRRRRPKGDKSGRRRSKAHDSSMEPDGMDAKDHSDLQALQNHNLLIALGGVARGGTPHFPMSHYSHFLRASQNYSDGSAEEVQLPSGEELVTGDDSGPENDVDASNIPLNLVATQFAAD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00246013;
- 90% Identity
- iTF_00246013;
- 80% Identity
- -