Basic Information

Insect: Bradysia odoriphaga
Gene Symbol: -
Assembly: GCA_016920775.1
Location: JAFDOW010001173.1:859059-867319[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 30 1.6e-05 0.00083 19.5 0.1 1 23 110 132 110 132 0.96

2 30 2e-05 0.001 19.2 0.1 1 23 138 162 138 162 0.97

3 30 0.014 0.72 10.3 2.8 1 23 168 191 168 191 0.96

4 30 1.6e-05 0.00079 19.6 0.3 1 23 197 219 197 219 0.95

5 30 0.00015 0.0076 16.5 0.9 1 23 225 247 225 247 0.99

6 30 1.3e-05 0.00066 19.8 2.4 1 23 254 276 254 276 0.98

7 30 6.7e-05 0.0034 17.6 0.3 3 23 284 304 282 304 0.95

8 30 2.2e-05 0.0011 19.2 2.2 1 23 310 333 310 333 0.97

9 30 0.00062 0.032 14.6 0.2 1 23 531 553 531 553 0.97

10 30 1.1e-05 0.00058 20.0 0.6 1 23 565 587 565 587 0.98

11 30 1.2e-07 6.3e-06 26.2 1.2 1 23 593 615 593 615 0.98

12 30 3.7e-05 0.0019 18.4 2.0 1 23 621 643 621 643 0.99

13 30 2.3e-05 0.0011 19.1 2.4 1 23 649 671 649 671 0.98

14 30 0.0017 0.086 13.2 0.5 3 23 679 699 677 699 0.97

15 30 0.00073 0.037 14.3 0.4 1 22 705 726 705 728 0.89

16 30 4.7e-06 0.00024 21.2 0.4 1 23 802 824 802 824 0.96

17 30 2.4e-05 0.0012 19.0 0.1 1 23 830 854 830 854 0.97

18 30 5.1e-05 0.0026 18.0 3.5 1 23 860 883 860 883 0.97

19 30 5.1e-05 0.0026 18.0 0.2 1 23 889 911 889 911 0.97

20 30 0.00017 0.0085 16.4 1.2 1 23 917 939 917 939 0.98

21 30 3.8e-06 0.00019 21.5 2.1 1 23 946 968 946 968 0.98

22 30 4.5e-05 0.0023 18.1 0.3 3 23 976 996 974 996 0.97

23 30 1.4e-05 0.00072 19.7 1.8 1 23 1002 1025 1002 1025 0.97

24 30 0.00012 0.0062 16.8 0.6 1 23 1203 1225 1203 1225 0.98

25 30 2.3e-05 0.0012 19.1 0.2 1 23 1237 1259 1237 1259 0.97

26 30 2.2e-06 0.00011 22.3 4.0 1 23 1265 1287 1265 1287 0.99

27 30 0.00012 0.0059 16.9 0.5 1 23 1293 1315 1293 1315 0.97

28 30 5.6e-05 0.0028 17.9 2.0 1 23 1321 1343 1321 1343 0.98

29 30 1.9e-05 0.00098 19.3 0.3 3 23 1351 1371 1349 1371 0.98

30 30 0.0027 0.13 12.6 3.9 1 23 1377 1400 1377 1400 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	30	1.6e-05	0.00083	19.5	0.1	1	23	110	132	110	132	0.96
2	30	2e-05	0.001	19.2	0.1	1	23	138	162	138	162	0.97
3	30	0.014	0.72	10.3	2.8	1	23	168	191	168	191	0.96
4	30	1.6e-05	0.00079	19.6	0.3	1	23	197	219	197	219	0.95
5	30	0.00015	0.0076	16.5	0.9	1	23	225	247	225	247	0.99
6	30	1.3e-05	0.00066	19.8	2.4	1	23	254	276	254	276	0.98
7	30	6.7e-05	0.0034	17.6	0.3	3	23	284	304	282	304	0.95
8	30	2.2e-05	0.0011	19.2	2.2	1	23	310	333	310	333	0.97
9	30	0.00062	0.032	14.6	0.2	1	23	531	553	531	553	0.97
10	30	1.1e-05	0.00058	20.0	0.6	1	23	565	587	565	587	0.98
11	30	1.2e-07	6.3e-06	26.2	1.2	1	23	593	615	593	615	0.98
12	30	3.7e-05	0.0019	18.4	2.0	1	23	621	643	621	643	0.99
13	30	2.3e-05	0.0011	19.1	2.4	1	23	649	671	649	671	0.98
14	30	0.0017	0.086	13.2	0.5	3	23	679	699	677	699	0.97
15	30	0.00073	0.037	14.3	0.4	1	22	705	726	705	728	0.89
16	30	4.7e-06	0.00024	21.2	0.4	1	23	802	824	802	824	0.96
17	30	2.4e-05	0.0012	19.0	0.1	1	23	830	854	830	854	0.97
18	30	5.1e-05	0.0026	18.0	3.5	1	23	860	883	860	883	0.97
19	30	5.1e-05	0.0026	18.0	0.2	1	23	889	911	889	911	0.97
20	30	0.00017	0.0085	16.4	1.2	1	23	917	939	917	939	0.98
21	30	3.8e-06	0.00019	21.5	2.1	1	23	946	968	946	968	0.98
22	30	4.5e-05	0.0023	18.1	0.3	3	23	976	996	974	996	0.97
23	30	1.4e-05	0.00072	19.7	1.8	1	23	1002	1025	1002	1025	0.97
24	30	0.00012	0.0062	16.8	0.6	1	23	1203	1225	1203	1225	0.98
25	30	2.3e-05	0.0012	19.1	0.2	1	23	1237	1259	1237	1259	0.97
26	30	2.2e-06	0.00011	22.3	4.0	1	23	1265	1287	1265	1287	0.99
27	30	0.00012	0.0059	16.9	0.5	1	23	1293	1315	1293	1315	0.97
28	30	5.6e-05	0.0028	17.9	2.0	1	23	1321	1343	1321	1343	0.98
29	30	1.9e-05	0.00098	19.3	0.3	3	23	1351	1371	1349	1371	0.98
30	30	0.0027	0.13	12.6	3.9	1	23	1377	1400	1377	1400	0.91

Sequence Information

Coding Sequence: ATGGAAGGAGTGTGGCTTAAAACTGAACCGATCGATGACAGCTTTGATGATGATTTCTCAATTAAATTGGAACAGGGAATTGCCGAACCACTAACAATAATTGATGAGTCGAAAAGAGTGTACATTAAGTCCAACGATGATTTGGACGAAATTGAAGTCGAAATCGATCCGATACAAAAGACCGACGGCGACGTTAAGAAAGGCAACAAGAAATCACGTCACAAAATTCCCCAACGGAAGCAGAAATCTGATGCTGACAATGTTGAAAATGGATCGGCCGACAAAAAACCTAAGCGGAAGGCATCGACACGACTGGTTAAAAAGTCGTACATTTGTGATGAATGTGGGAAAGAATTTACCGGAGCATCTGGTCTCAACCGTCACAAATTGTTGCATTCCGGTTTACGGCCTTTCATTTGCCCCGAGGCGAACTGTGGAGCAGCCTTCAGTCAGAGTTCAACATTGAAGTCACACCAAATGTCGCACACTGGCGAACGAAAGTTCTTTTGTGAGGAGTGTGGCCAGGGATTTTTATCCAAATTCCATATGCAAATTCATCAACGGTCAAAACACAGTGGCGAGCGCCCATTCGTATGTAAGGAATGTGGTCAAGGATTCGCCCGAAAGCAAAGTCTAACCAGACATGAGCTGGAACATACTGGTCAGAAGCCCTACGAATGTGACGATTGCGGAATGAGATTCTATGAAAGGATACTGCTAAGGTCGCACAAGAAAACACACACAGCCGATGGTAAACCATACACTTGCGCGGAATGTGGGAAAGGATTCTATCACAAAACAAGTCTCAACGCGCACAAACGAAATCATTCGACGGTTCGGCCATTTGGTTGCGAAGTTTGTGGTAAGCGATTCACCCAGAAGGGAACgttaaatatacacaaagtgaTACACAGCGATGTCAGACCGTTTGAATGTGAGGAATGTGGGTTACGGTTCACTCAGAAATTCACGCTGAAAACGCACAGAATGAAGCAACATGGTCTATCAACAACTACACAGAAACAACAGAAGCCAACACATACCGGACTGTCTTCCGCAGTAACAGAACCAAGCCATAATGACAAAATTTCGCGGAACATCTTCATTCCGAAACCATCCGAAGAATTGGAAATCAATCTTTCAATGGATCTGACACCCAAATCGATTTTGCCAATAAGCGGAAAACTGAACGAATTAAAGGAGGCTGTGTTCACAACAGAATCTGCTGCCATGGCTCTACAACCAGAAGAAACAAGTGAAATCGCAAGAAGTTCTCCAACGTCACAGAGCGAGTCAAGCGATTCAGAGAACGATTTTATGGTCGGGTCTAATGGCGACGAGTCGATCGGATTTGAAGATAAATTTGTGGTAGATGCTAGCGCTGATTCACTACAACCTCAACCCATTGAACCCATTGACGGAATATCAACGAATTTGGATCAAATTAAAGAAGAACCACTGAGCAGCGAGCCCTACTTTGACGTCTGGAAAACTGAACGAACGACGCCGGATGATGAATATGTAAGTGAAAAGCCAGTGAAGAAACCGGCCGCTAAGAAAAGTTCGCGTGAACAGTCAACTAAACTGCCTTTTGCCTGCGGCAAATGTGAGAGAACGTTCGCATTGGTCGGTGCTCTAAAGAACCATCAACGATCACACAAATTCGATAACAAAGAACGAGAAAAGAAAACGTTCATCTGTGACGAATGTGGGAAAATATTCGCCGGAAAGCAGCATCTACAAATTCACAAACGCATCCATTCTGGATCGACGCCTTACTCTTGCACTGAGTGCGATAAAAGCTTCACCCAACTGGGCAACTTAAAGTCACACCAGTTAACCCACACCGGTGAACGTCCATTCACTTGTGAGACCTGTGGAATggcattttcaaagaaaaacaccCTCGACAAACACAAGCGCACTCATACGGATGACCGAAATTTCGAATGCGATGTCTGTGGAAGGAAATTTAAACATCCAAGTAGCATAAAGCGACATAAGTTGAGCCATACCGGTGAGAAAAATTACGGCTGTGACATCTGTGGCAAAACGTTCATCGAGAAAAGTTACATCAAATTCCATTTACGGACCCACACGGGATACAAACCATTTGCATGCGATGAATGTCCTTCCACATTCGTTGATAAATCTCAGCTGACGCAACATAAGGGATATTCTCATCGGCGAGTCGGTGAACCTTCGCCCTACCGAAGACACGAATCGAAAAGCGTGTACGTTAAATCCAACGATGATTTCGAGGAAATCGATTCGATACAAGGAACTGACAAAGGTGCCAAGAAATCAAGTCACAAAATTCCCCAACAGAAGCAGCAAAAGAAATCTAAATCTGATGCTGAGAAAAAATTGAAGCAGAGCAAGAAGGTACGCGTTAAAAAGTCGTTCATCTGTGACGAATGTGGCAAAGAATTTTCGTCATCATACGGTCTCAATCGTCACAAATTGTTGCATTCCGGTTTAAGGCCTTTCATTTGTCCCGAGGCGAACTGTGGAGCAGCCTTTCGACAAAGTTCTACATTGAAGTCACACCAAATGTCGCATACCGGCGAACGCCAATATTTTTGTGAGGAGTGTGGCCAGGGAttttcatccaaattccatatgCAAAATCATCAACGTTCTCGCCACAGTGGCGAACGTCCATTTGTATGTGCAGAATGTGGTCAAGGATTCATCCGAAGGAAGGGTCTCACTAAACATCAATTGGAACATACCGGCGTCAAGCCCTTCGAATGTGACGATTGTGGAATGAGATTCTATGAAGAGAAACTGTTAAAATCGCACAAGAAGACACACACCGCCGATGGCAAGCCATTCACGTGCGCGGAATGCGGGAAAGGATTCTATCACAAGACAAGTCTCAACGCTCACCAAAGAAATCATTCGACAGTACGGCCATTCGGTTGCGAAGTTTGTGGTAAGCGATTCATACAGAAGGGAACGCTAAATGTACACAAAGCAACACACAGCGACGTTAGACCGTTCGAATGTGAGGAATGTGGACTGCAGTTCACTCAGAAGTACACACTGAAAACGCACAGGATGAAGCAACATGGTCTATCAACAACGTTGCAGAAACAACAGAAGCCAATATACACTGGGCCGTCTGCCCCAGTAACACAACCAAAGAGCCATAACGACAAATTTTCGCAGAACGACCTCGATCCGAAACCATCGGAAAGCAATGCTACCGTTTCAATTGGTGTGACACCGAAATCCATTTTCCCATCAACCGGAAACTTGAACGAATCAAAGGAGAGAGCCTTCACAACATCAGAATCTGGATTTCAGAATCAACAGCCTCAGCGACCAGAGACAACATGCGAAATCGGAAAGGCGAAAAGCGAGCCAAGCTCTTCAGAGAGCGAGTTCATGATCCTATTGTTGACGCACTGCAATCACAATCCAGTTGATGGATTATCAACGAATTTGgatcaaattaaaaaagaacCACTGCTCAGCGAGCCCTACGTCGACATCTGGAAATCTGAACGAACAACGCCGGACGATGAATATGTAAGTGAAAAGCCAGTGAAGAAACCGGCCGCTAAGAAAAGTTTGGGTGACCAATCAATTGAGCTGCCTTTTTCCTGCGGCAAATGTGAGAGAACGTTCGCACTGATCAGTGCTCTAAAGAACCATCAACGATCACACAGATTCGATAACATGGAACGAGAAAAGAAAACGTTCATCTGCGACGAATGTGGAAAAGTATTCGCCGGAAAACAATATCTCAAAATTCACAAGCGCGCTCATTCGGGATCGACGCCTTACACTTGCACGGAGTGCAACAAGAGCTTCACCTATCGAAGTAGCTTCAAAACCCATCAAATTACTCATACCGGTGAGCGCCCATTCGCTTGCGAGACCTGTGGAATGACCTTTTCAGTGAAGAAGTCGCTGGACAGACATCGGCTAGTACATGTTGAGGTTAAAAATTTCGAGTGTGATGTCTGTGGAATGAAGTTCAAACATCCTAGTAGCATAAAGCGACATAAGTTGAGCCATACCGGTGAGAAAAATTACGGCTGTGACATCTGTGGCAAAACGTTCATCGAGAAAAGTTACATCAAAATCCATTTGCGAACGCACACGGGATACAAACCATTTGCATGCGACCAATGCCCATCCACATTCGTTGATAAATCTCAGCTGAAACGACATAAGGCACACTGTCATCGCGGAGTCGGTGAACCTTCGCCCTACCGAAGACTGAAATTGATGAAGATGATGAAAATGATGAACGCTGTTCATTGA
Protein Sequence: MEGVWLKTEPIDDSFDDDFSIKLEQGIAEPLTIIDESKRVYIKSNDDLDEIEVEIDPIQKTDGDVKKGNKKSRHKIPQRKQKSDADNVENGSADKKPKRKASTRLVKKSYICDECGKEFTGASGLNRHKLLHSGLRPFICPEANCGAAFSQSSTLKSHQMSHTGERKFFCEECGQGFLSKFHMQIHQRSKHSGERPFVCKECGQGFARKQSLTRHELEHTGQKPYECDDCGMRFYERILLRSHKKTHTADGKPYTCAECGKGFYHKTSLNAHKRNHSTVRPFGCEVCGKRFTQKGTLNIHKVIHSDVRPFECEECGLRFTQKFTLKTHRMKQHGLSTTTQKQQKPTHTGLSSAVTEPSHNDKISRNIFIPKPSEELEINLSMDLTPKSILPISGKLNELKEAVFTTESAAMALQPEETSEIARSSPTSQSESSDSENDFMVGSNGDESIGFEDKFVVDASADSLQPQPIEPIDGISTNLDQIKEEPLSSEPYFDVWKTERTTPDDEYVSEKPVKKPAAKKSSREQSTKLPFACGKCERTFALVGALKNHQRSHKFDNKEREKKTFICDECGKIFAGKQHLQIHKRIHSGSTPYSCTECDKSFTQLGNLKSHQLTHTGERPFTCETCGMAFSKKNTLDKHKRTHTDDRNFECDVCGRKFKHPSSIKRHKLSHTGEKNYGCDICGKTFIEKSYIKFHLRTHTGYKPFACDECPSTFVDKSQLTQHKGYSHRRVGEPSPYRRHESKSVYVKSNDDFEEIDSIQGTDKGAKKSSHKIPQQKQQKKSKSDAEKKLKQSKKVRVKKSFICDECGKEFSSSYGLNRHKLLHSGLRPFICPEANCGAAFRQSSTLKSHQMSHTGERQYFCEECGQGFSSKFHMQNHQRSRHSGERPFVCAECGQGFIRRKGLTKHQLEHTGVKPFECDDCGMRFYEEKLLKSHKKTHTADGKPFTCAECGKGFYHKTSLNAHQRNHSTVRPFGCEVCGKRFIQKGTLNVHKATHSDVRPFECEECGLQFTQKYTLKTHRMKQHGLSTTLQKQQKPIYTGPSAPVTQPKSHNDKFSQNDLDPKPSESNATVSIGVTPKSIFPSTGNLNESKERAFTTSESGFQNQQPQRPETTCEIGKAKSEPSSSESEFMILLLTHCNHNPVDGLSTNLDQIKKEPLLSEPYVDIWKSERTTPDDEYVSEKPVKKPAAKKSLGDQSIELPFSCGKCERTFALISALKNHQRSHRFDNMEREKKTFICDECGKVFAGKQYLKIHKRAHSGSTPYTCTECNKSFTYRSSFKTHQITHTGERPFACETCGMTFSVKKSLDRHRLVHVEVKNFECDVCGMKFKHPSSIKRHKLSHTGEKNYGCDICGKTFIEKSYIKIHLRTHTGYKPFACDQCPSTFVDKSQLKRHKAHCHRGVGEPSPYRRLKLMKMMKMMNAVH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -