Bodo012806.1
Basic Information
- Insect
- Bradysia odoriphaga
- Gene Symbol
- kn
- Assembly
- GCA_016920775.1
- Location
- JAFDOW010000349.1:1025758-1065094[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.7e-233 9.2e-229 760.4 0.0 11 385 21 410 13 413 0.97 2 2 4e-12 6.3e-08 31.2 12.3 422 528 413 517 410 531 0.79
Sequence Information
- Coding Sequence
- ATGTTTGGTCTTCCACCGGGCGGTGGTGGAGATTTAAATCAACCCAGAGGACCAATTACATCGTTGAAAGAAGAGCCATTAGGTGCTAGAGCATGGATGCAACCAATAGACCAATCTAACCTCGGAATCGGCAGAGCAAATTTCGAGAAGCAACCGCCCAGCAATCTTAGGAAAtcaaatttctttcatttcgttATCGCACTGTACGACCGATCTGGTCAGCCCATCGAAATCGAAAGAACGGCATTTATTGGCTTTATCGAAAAGGATCAAgaAAGTGATAGCACAAAGACAAATAATGGAATTCAATATCGGCTACAATTACTGTATTCAAACGGCGCACGCCAAGAACAGGACATTTTTGTTCGGCTGATTGATTCAGTTACCAAACAGGCTATTGTATACGAAGGCCAAGATAAGAATCCTGAAATGTGTCGTGTATTGTTAACCCACGAAGTTATGTGCAGccGCTGTTGTGACAAAAAGAGTTGTGGTAATCGAAACGAGACTCCATCAGATCCAGTTATTATTGATAGgtttttcctcaaatttttcctgaaatgtaatcaaaattgtttaaagAACGCCGGTAATCCACGAGACATGCGACGATTCCAAGTTGTGATCAGTACCCAAGTGGCCGTAGACGGACCATTGATGGCAATATCCGATAATATGTTTGTGCATAATAATTCGAAGCACGGTCGGCGAGCTAAGCGATTGGACACTACGGAAGGTACAGGCTCGTCCCCATTATCCATTTCGGGTCATCCTCTTGGTCCAGACAGTACGTACGACGGCCTTTATCCACCATTGCCTGTAGCGACACCATGTATAAAGGCTATATCGCCGAGCGAAGGATGGACAAGCGGTGGAGCACAAGTTATCATTGTTGGCGATAATTTCTTCGATGGATTACAAGTGGTGTTTGGTACGATGCTAGTGTGGAGTGAACTGATTACATCACATGCAATACGTGTTCAAACACCACCCAGACACATACCGGGCGTCGTAGAAGTTACACTATCATACAAAAGTAAACAATTCTGCAAAGGGTCACCTGGCCGATTCGTTTATGTTTCTTTAAGCGAACCGACAATCGACTACGGGTTTCAACGACTTCAAAAACTAATTCCTCGTCACCCCGGCGATCCGGAAAAACTATCCAAAGAGATAATATTGAAAAGGGCAGCAGATTTAGCTGAAGCATTGTACTCGATGCCTCGTTCTCCAGGCGGCTCGACGGGCTTTAACTCGTATACGGGACAACTGAATGTTAGTGTACAGGAAGGTACAACATGGGTCGAAGACGACTATCAACGGGCACAAAGTAGTAGCGTCAGTCCTAGAGGTTATTGTAGTAGTGCGTCAACGCCACATTCATCTGGCGGTGGATCTTATGGTGGTGGAAATGGTGGATACGGGCCGAATATGGGACTATCATCCTCGCCGGCCAGTGTGTTCAATTCAACATCTACCAGTGCCTTTGCACCTTTAGTTGCAACATCAACTGCTTGGCATCAAGCACTTGTCCCTGTGCATGCTACATCACATCAAACTTCCTGGCATAATCCTTCAGCTGCAACGGCTGTTTAG
- Protein Sequence
- MFGLPPGGGGDLNQPRGPITSLKEEPLGARAWMQPIDQSNLGIGRANFEKQPPSNLRKSNFFHFVIALYDRSGQPIEIERTAFIGFIEKDQESDSTKTNNGIQYRLQLLYSNGARQEQDIFVRLIDSVTKQAIVYEGQDKNPEMCRVLLTHEVMCSRCCDKKSCGNRNETPSDPVIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVISTQVAVDGPLMAISDNMFVHNNSKHGRRAKRLDTTEGTGSSPLSISGHPLGPDSTYDGLYPPLPVATPCIKAISPSEGWTSGGAQVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGSPGRFVYVSLSEPTIDYGFQRLQKLIPRHPGDPEKLSKEIILKRAADLAEALYSMPRSPGGSTGFNSYTGQLNVSVQEGTTWVEDDYQRAQSSSVSPRGYCSSASTPHSSGGGSYGGGNGGYGPNMGLSSSPASVFNSTSTSAFAPLVATSTAWHQALVPVHATSHQTSWHNPSAATAV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00517500;
- 90% Identity
- iTF_00245121;
- 80% Identity
- iTF_00245121;