Basic Information

Gene Symbol
ARID2_1
Assembly
GCA_016920775.1
Location
JAFDOW010001438.1:223151-230152[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.4e-25 5.5e-22 77.8 0.1 4 89 46 129 43 129 0.95
2 2 7 1.6e+04 -8.9 8.9 23 65 1430 1474 1412 1490 0.42

Sequence Information

Coding Sequence
ATGGAAATATCACAAGGTAATACGTCGACGGTGTCGTTGAACGAGGATTCATTTAGCAGTTTTAAACAAAGTTCAACcaagaaaaacgacaagaaTCTTGCCGGCGTCAGTCATAATCGTGGTGACGATCATGGAAGTTTTTACAAAGAACTTTACCAGTTTCATGAAAATAAAGGAACACCTATACCCcgagtgcctaaaataaatggACATGAAATTGATTTGCATAAGTTTTACAATCTTGTTATTGCCCGAGGTGGATGGGCCAAGATAAACTACCGGAACGAATGGGAGGATTTGGTTCCCGAGTTTAATCTTCCCAAGAAATGTGTAAATGCATCAGTGGCTCTGAAGCAAATTTACTTGCGTTACCTGGACAGATACGAAAAAGTGCATTTTCTGGGAGAAGACAGCGAACGTGTTGACGATCCCGACGACGATAATCGCCACAAGAAATGGAACAACAAAGTTTTGAACGAGGTGCCATTGAAGTACAACTACAGTCAGCACACTGTTCCCGATTCGATGCGAATTATCCATAAATTGTCAACGGAATTGTATAAGGCCAGTGAATATGATCGGCTGATAATGTCGCTTATGTCTCCATTGCCGAATGAACAAGATTTTGCCATTAATGTGTGCACATTGATGGCTAACGAGAGCAAACAtactttgaaaattgaaaattcaccgAAACTCTTGGAAGTTTTGCTTGGTCATGCGGGAATATATTCTCATTTCACCCTACGAgtcattttcattgaattctaTTCGAAGATTCGTCGACATTCGTTCAATGCATTTTGGTCCGATTGTTTGAGAGAAAAGCCGGAAATTTTGGAGCTCTCATACGAGGACTACTATCAATCGCCTgacgaaaaaatggaaaatggaattcCCGAAGACCAATTTCCCAAACCGGTAAATAGTCAGCGAGAATCGTTTGAAGATGGTTTGATTGGTGGTGACGATGATGAGGAAGACAACGACGCTGCGACAtcattagattttttaaatctaCGTCGCGGCCTTGGCACCCATGACTACATAGGTCAACGCGTTCACCAAATCGCTTCAATACTGCGAAATCTGTCGTTCATCGAAGAGAATCTACCCACTCTGGTGCGCAATCGATCCTTCATTCGGTTTTTGGTGATGACAGCTAACATCAGGTGGGGCAATCTGCATCACATCGGTTTGGATATTTTGGGTAATGTGGCTACGGAAATTGACTTGAGTGATCCATCTTCGGATGATTTAACGAGGTGCCTATTGTCAACCATTTGCGATGGACTGGAAGGGCAAGATCGTGGTGTGGTTATAAGTTGTTTGGAAATATTGTACAAACTGTGCCAGAAAGACAACAATGAAGATCATCTGCATCGTTGTttggataaaaaaatttaccgacAAATTTGCCTGTTCTTATCGTTGAGTGACATTATGCTACTGTTGTACACGCTCGAATGCATTTATGCGTTGAGCTCTTTGGGTGAAAAATCGTGCTTGGCAATAGTGCATGTCAGTGGAGTTATTGACACATTAGTGTCGTTGGTAACGGTTGAGGCACAGAGCTATGGTCCGGATGGTTGCATTTTAATGAGAGTAGTTGAAACTGTACCGAGTAACATGCCTGCTCCGTCTCCAAACATCACACTTAATACAAGTGGTAACTTAACGAATGTTCAGTCGGTACCAGCAGCGACATTGACACAACAAGACATAAAGGACGGAGGTACAACAAGTACATTGACTACAATAACATCGAATGAAACGCAAAAGCCACTTCCGGTTTCGGCTCCTGTTCAGCAGCAAGCTGTTGTTCTTCAACCGCCTCTAATTCGTCAATCGACACCAACGACTCAAACGGTCTCGACAATTAACTCAACGGTAAACAATTGCCAATCTCCAATTAAAACCGAATCCATAAAGGTTGAGACGCCAACCACTCCAGCTGCTACACAGATGAGCCTAAAACAATCTCAGCAGCAAGTGGTTCAGGAAAATGAACAGTTTGCACTGGCCTGGCTGCGTGCGACTTTCGAACCCGTAATGGCGTTGACGAGCCGAATCGAGCAGTCTGATTTGTACAAGATGTATAACACGGCGAGTATGAAAATCGGAAGACAAAGTGTTGTGTCACTGGCTCATTTTCCACGTTGCGTTCGGACGGTGTTCGGTGGAACGGTTGGtccgaataaaatcaaaatcagcaaCGTTGACACTATGTGCTACGAGGGCATTCGAATTCGAGCGAAGCCGTTGGCTGTTGTACATAAGGGAAcgattttgCAAGGACAGGTCACCAATGAAGTTACGATTAAGAAACAGGAACCTTCGTCAACGATAAAGCAGACGATCAACCAAACTCAGGTACAAAACCAGCAACAAAACAGCAATCAGCATGGATCGATTCTAGTGGCACAGTTGAGCaataaaaatcaaCAGTCTCAACAGCAAACGCAGTACAATCCATCCACTCAAATTCTACAGCAAGTTCTGACGAGTCAAGGCGAAAGTGTAATGGTAGTGAcgaacaaaccaaattccaaTTTAATTATGCAACAGCAACAGGTGAATACTACGAATGTCATCAATAGTCCGACGATGGTATCCACAACGTCCTCATCGTTAATTAAAAGTCTTTTGGCTAATAAGGTAACGCCGCACGATAATGCTGCAAGTAATATAACGTCGTGTTTGATTGCTCCGAATGTTAATGTGCATCAGCAGGTCGCCCAACGGCAGCATTTACAGAAGCAAAAAGAAATTGCACAGCAAATATCTGTGTCTTCGAACGTTACGTCCATAATCAACTCGCATAACCAAAATTCCAGCTTAACAATTAAGCCAACCAATGTCAAGTCCATCGCAACAACTACCATACTGCCAACGACAATGATCAAAAAGGATGTTGATTCGGAAACTACAAATTGGGATCCGGTTCCGCCGCTAGCTCCGTTAAGTGGAATGCATGGCACGATTCGGACTATGATTCCGGCCGTCATTCCAAAGGATGAAGACTCCGATTCAACCGGAAATGTGTCAATTGCGTCGAGTGTGATCAGTACAAATCCGAATACCCCGATTGTTGAAGATGCTGAGAATTCATTTACTAGTTTCGAGGGGCTATTGATGCCGAATTCAAAGGTCAATGTAACCGATGAAGATTCGAAGGATTCGTTTAACAAACAAACATCGCCTTCCCTGGTTGTCAGTTCGAATAAAATGCTGGCTGACTTATTGGAACGAAAATCGTTGGAGCCGCCGTATAATGTTAGCACAACTGAGGGTAATACGATGAAGCGGAAAGTTGATTCAATGAGCGACAGCAGTGAATCGAGTGTACCTGTAAAGCGACAGACCGGTGAAATTGGCGATCCAATTGTGATCGATGGTGACGACGATGTTGTCGTACCAAATTCAGCATCATCTAATGCGGCTAACTTGTACGCAAAATTAGCTGCTTCTTTACTCGAAGATGAAGATAtggaagaagaggaagaaattAAGCCGCCGATCATGCATCAACCGATCGTGCAAGAACCTCAAAAACAGGTGATTACCGTTCCTGTTCCATTGCAACGTCAAATTATTGTGTCGCCCAACAATCCGCCGCAAATTGTCTTAGCACCAAGTCAGCCACAGCAAATCGGCCAGGCTACTGCTACAATCAAAACGGAGACGGGCTATCAAACAGTACCTGTTATTTTGCAACATTCTAGCGGGACGAATCAACTGACTACAAATTATCAAATCCAAAAGCAAATGGTTCCAAGTGGACAGCAAATTATTCAACCGATAATGCAACAGCCACAACAAACTCAGTACATGTTAGCTACGAATAATCAAGGTCAAACTTACCTTGTTGCTCAACAGGCTCCGGCAATGAACCAACATCAGGCAGTTTTAGTCACTCAATCGCCATCAGGAGCGTCAACAAAAACTATTATATTTCTACAGCAGCAACCTAACCAAAATATGCAGCAAAGTGGACAGTTAATTACAACTCCGGGAACGCCACAGAAAGTCATAATGGCAACGCAACAAGGTCAACAGATGATAGTAACACAAGTGCCACGTCCAGTTCAACATCAAATTATTATGAATCACCACCCAATGTCTACCACAGCCACCATTGTCCAAAGTAATTCATCTATATCCACTAATGCAATCGTTAGTCAGACGGCGTCGATACTATCCTCAGCAAATCAATCACAACCTCAAATTATCACTCAACAACAGTtgcaacaacatcaacaactaGCATTACCACCACGGTCACAAACACCAGTAGTGCAACAACAAATCTTAACGCAACAAGTAAATCATCAACAAGTACAACAACAgccacagcaacaacaacaactgcagcaacaacaacaacagcagcagcagcaacaacaacaactgcagcagcaacaacaacagcagctgcaacaacaacaacaacaacagcaaactAATATAACGGAACGAAaaccaatttttgttggaatcgaGTCTGGTGAAAGTACAATACAAGCTACAAAGCCCCAATCAATGCCTCCAAAAGCATTGACTCCTTCCCCACCTCCTGATGTCAAATCGGCTTTGACGGTTCCAAAAGTTGAAGAAGAATTACCAGACCCGAATTGGTTATGGATCTGCGATTGGAGAGGCTGTTCAAAGAAAAAATTCCGATCTGCTAACGATGTCTACCTTCATACATGTACCGTACATTGTCCTGATAATATTGATCCCAACGCCGAGATCTATTGTCAGTGGGGCCCCGGGCCAAATCTATGCGACAATCTTCCCAGGAAACGATTTTCGTTGATGACTCATTTATTTGATCGACACTGTACGACCGAGtcGTTTAAATCCGCTTTACAGAGACGAGTTGCTGCTGGTCCGTTACCGAATCAACCGTCAGCCCCAGTTACGATCATAAAAAATCCAATCGCAGCGAATAACTCAACAAACAATGGTGAAAACAACGGAACAGCTTCGCCTGCTCTGTCAACCTCTTCGTCCGGTTCTCTACCTGCAGCTAGTGCTGCAATGCAAGCAATTAAACGGCATGCATTGGATTTTGTAAATCCTCGAGAAATGATGGATGAAAACGAAGGTCCAGTCACAAAAAGCATTCGGCTAACTGCCGCTCTGATTCTACGAAATCTCGTGAACTATACGAGTTCTGCGAAACGAAGTTTAAGATTTTATGAACCTCATCTGGCGGGAGTGGCGTTAAGCAATGTGGAGTCGAGCCGAACAATTGCCCAAGTTCTGTACGAAATGAATGAGGCATCGTCGTATCCGTATTCCTAA
Protein Sequence
MEISQGNTSTVSLNEDSFSSFKQSSTKKNDKNLAGVSHNRGDDHGSFYKELYQFHENKGTPIPRVPKINGHEIDLHKFYNLVIARGGWAKINYRNEWEDLVPEFNLPKKCVNASVALKQIYLRYLDRYEKVHFLGEDSERVDDPDDDNRHKKWNNKVLNEVPLKYNYSQHTVPDSMRIIHKLSTELYKASEYDRLIMSLMSPLPNEQDFAINVCTLMANESKHTLKIENSPKLLEVLLGHAGIYSHFTLRVIFIEFYSKIRRHSFNAFWSDCLREKPEILELSYEDYYQSPDEKMENGIPEDQFPKPVNSQRESFEDGLIGGDDDEEDNDAATSLDFLNLRRGLGTHDYIGQRVHQIASILRNLSFIEENLPTLVRNRSFIRFLVMTANIRWGNLHHIGLDILGNVATEIDLSDPSSDDLTRCLLSTICDGLEGQDRGVVISCLEILYKLCQKDNNEDHLHRCLDKKIYRQICLFLSLSDIMLLLYTLECIYALSSLGEKSCLAIVHVSGVIDTLVSLVTVEAQSYGPDGCILMRVVETVPSNMPAPSPNITLNTSGNLTNVQSVPAATLTQQDIKDGGTTSTLTTITSNETQKPLPVSAPVQQQAVVLQPPLIRQSTPTTQTVSTINSTVNNCQSPIKTESIKVETPTTPAATQMSLKQSQQQVVQENEQFALAWLRATFEPVMALTSRIEQSDLYKMYNTASMKIGRQSVVSLAHFPRCVRTVFGGTVGPNKIKISNVDTMCYEGIRIRAKPLAVVHKGTILQGQVTNEVTIKKQEPSSTIKQTINQTQVQNQQQNSNQHGSILVAQLSNKNQQSQQQTQYNPSTQILQQVLTSQGESVMVVTNKPNSNLIMQQQQVNTTNVINSPTMVSTTSSSLIKSLLANKVTPHDNAASNITSCLIAPNVNVHQQVAQRQHLQKQKEIAQQISVSSNVTSIINSHNQNSSLTIKPTNVKSIATTTILPTTMIKKDVDSETTNWDPVPPLAPLSGMHGTIRTMIPAVIPKDEDSDSTGNVSIASSVISTNPNTPIVEDAENSFTSFEGLLMPNSKVNVTDEDSKDSFNKQTSPSLVVSSNKMLADLLERKSLEPPYNVSTTEGNTMKRKVDSMSDSSESSVPVKRQTGEIGDPIVIDGDDDVVVPNSASSNAANLYAKLAASLLEDEDMEEEEEIKPPIMHQPIVQEPQKQVITVPVPLQRQIIVSPNNPPQIVLAPSQPQQIGQATATIKTETGYQTVPVILQHSSGTNQLTTNYQIQKQMVPSGQQIIQPIMQQPQQTQYMLATNNQGQTYLVAQQAPAMNQHQAVLVTQSPSGASTKTIIFLQQQPNQNMQQSGQLITTPGTPQKVIMATQQGQQMIVTQVPRPVQHQIIMNHHPMSTTATIVQSNSSISTNAIVSQTASILSSANQSQPQIITQQQLQQHQQLALPPRSQTPVVQQQILTQQVNHQQVQQQPQQQQQLQQQQQQQQQQQQQLQQQQQQQLQQQQQQQQTNITERKPIFVGIESGESTIQATKPQSMPPKALTPSPPPDVKSALTVPKVEEELPDPNWLWICDWRGCSKKKFRSANDVYLHTCTVHCPDNIDPNAEIYCQWGPGPNLCDNLPRKRFSLMTHLFDRHCTTESFKSALQRRVAAGPLPNQPSAPVTIIKNPIAANNSTNNGENNGTASPALSTSSSGSLPAASAAMQAIKRHALDFVNPREMMDENEGPVTKSIRLTAALILRNLVNYTSSAKRSLRFYEPHLAGVALSNVESSRTIAQVLYEMNEASSYPYS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01265566;
90% Identity
iTF_00245179;
80% Identity
-