Bcop015124.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Bradysia coprophila
Gene Symbol
ZNF32
Assembly
GCA_014529535.1
Location
NW:129354-829608[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 30 0.00024 0.011 16.1 0.3 1 23 323 345 323 345 0.99
2 30 6.6e-05 0.0028 17.9 5.0 1 23 351 373 351 373 0.98
3 30 0.00012 0.0053 17.0 0.9 1 23 379 401 379 401 0.99
4 30 7.8e-06 0.00034 20.8 3.2 1 23 407 429 407 429 0.98
5 30 6.4e-05 0.0028 17.9 0.8 1 23 435 457 435 457 0.99
6 30 2.2e-06 9.3e-05 22.5 1.1 1 23 463 485 463 485 0.98
7 30 0.00078 0.033 14.5 1.1 1 23 491 513 491 513 0.99
8 30 0.00012 0.0053 17.0 0.9 1 23 519 541 519 541 0.99
9 30 7.8e-06 0.00034 20.8 3.2 1 23 547 569 547 569 0.98
10 30 3.2e-06 0.00014 22.0 0.4 1 23 575 597 575 597 0.98
11 30 1.7e-06 7.2e-05 22.9 0.4 1 23 603 625 603 625 0.99
12 30 0.00012 0.0053 17.0 0.9 1 23 631 653 631 653 0.99
13 30 7.8e-06 0.00034 20.8 3.2 1 23 659 681 659 681 0.98
14 30 0.00029 0.013 15.8 1.2 1 23 687 709 687 709 0.99
15 30 7.8e-06 0.00034 20.8 3.2 1 23 715 737 715 737 0.98
16 30 0.00029 0.013 15.8 1.2 1 23 743 765 743 765 0.99
17 30 1.7e-06 7.2e-05 22.9 0.4 1 23 771 793 771 793 0.99
18 30 4.8e-06 0.00021 21.4 2.8 1 23 799 821 799 821 0.98
19 30 1.3e-06 5.6e-05 23.2 0.7 1 23 827 849 827 849 0.99
20 30 3.9e-07 1.7e-05 24.9 1.2 1 23 855 877 855 877 0.99
21 30 5.6e-06 0.00024 21.2 1.8 1 23 883 905 883 905 0.99
22 30 1.9e-05 0.00083 19.5 0.4 1 20 911 930 911 933 0.95
23 30 2e-05 0.00087 19.5 1.7 1 23 939 961 939 961 0.99
24 30 1.8e-07 7.6e-06 26.0 0.5 1 23 967 989 967 989 0.99
25 30 6.2e-06 0.00027 21.1 0.1 1 23 995 1017 995 1017 0.98
26 30 0.00021 0.0088 16.3 0.2 1 20 1023 1042 1023 1045 0.95
27 30 0.00011 0.0047 17.2 4.3 1 23 1051 1073 1051 1073 0.99
28 30 0.0001 0.0044 17.3 1.1 1 20 1079 1098 1079 1101 0.95
29 30 1.9e-06 8.1e-05 22.7 0.4 1 23 1107 1129 1107 1129 0.97
30 30 3.7e-06 0.00016 21.8 3.8 1 23 1135 1157 1135 1157 0.97

Sequence Information

Coding Sequence
ATGGATCTGATTAATACTTCAGAGCGGAACTGGGACGATACACCTGTTGAAATTCCCCCAGAAGTGGTCCAAACAATTATTGGAATAGAACGACTGCAACATGAACAGTTCCATAATACCACCACTGTCATCCCGACTATCACGTTCGATAGTCTCCTTTTAAATCACAGAGCATCCAATAGTGATTACCCGAACGAAGCGTTAGCCGAATTAGGACCGGAATTTCCAAGAGCCGAATTAGGCGCTGAATTCGATGGTGATCAAGCTCCAAGTGGTTGTGACATCGAACTACCAAAAACTAACCTCAACAGAGTGATGTATAGCAACGTTCGCGAATATGGCACAGATCTCTGTGCAGAAATTTGTCCGACCAGCAACAACTGTGGTTCAGGCTTAGAGGAAAACTCAACAATAACGGCTATAAGAATTCAATTACAACAGCAGCGAGAGAAGTTCCTAGCATTGCAAGAGAATATGTTAGGCTTAAATGGTCAAATAAAGCAGCGATACGAGACGATTTTAGAATTTCCAAGGCAGTTGAATACGGAACACGAGTTTCATCGGCCGAATGTCCCGACGATAGACCAACAGCTACAGCTACCACTACAGACGAAGGTGAGCTCTGTTTATCAAGTCCCAACGTCTGAACATTTTGATGGAACGCACTCGGAAATCGCCGAAACAATCAGGACGAATCAACTGTCGTCACTAAGGTACTCTGGTCGAATGGAACATATCCAAGAAATTGACATTTTGCACTCGTCTACAGGAGACGTCACACGATCGGAAGACGATGCAGAACTGCATTGTAAATCAGAACATCCAACGCCATCATATCAAGAAGATAGTTTCAACCTATCAGAAGAGTCATTTAGGATGAAGCAGGTTCGTTCCGACCAGATTAGTAAAGGTGAAACCGAGACATCTACTAGAAAGCCACGAGACTCTCCTAAAAGATCGAAAATTTATACCTGTGGAGAGTGTAAGAAGGAATTCAATTGGAAGGGCAGTCTTACCGTACATTTAAGGATCCACAGTGGCGAGAAGCCCCACAAGTGTAAGCATTGTAATTCTGCTTTCAGTCAATCAAGCGGTTTGAAAAAACATCAACTGGTTCACTCTGgTGAGAGACCCTACAAGTGTAAGGATTGTAATTCTGCTTTCAGTCTATTAAACACTTTGAAAATACATCAACGGGTTCATACCGgtgAGAGACCCTACAAGTGTAAGCATTGTAATTCTGCTTTCAGTCAATCAAGCGGTTTGAAAAAACATCAACTGGTTCACTCTGgTGAGAGACCCTACAAGTGTAAGGATTGTAATTCTGCTTTCAGTCTATTAAACACATTGAAAGCACATCAACGGGTTCATACCGgtgAGAGACCCTACAAGTGTAAGGATTGTAATTCTGCTTTCAGTCAATCAAGCGGTTTGAAAAAACATCAACTGGTTCACTCTGgTGAGAGACCGTACAAGTGTAAAGATTGTAATTCTGCTTTCGGTCTATTACGCACTTTGAAAACACATCAACGGGTTCATACCGgtgAGAGACCCTACAAGTGTAAGGATTGTAATTCTGCTTTCAGTCTATTAAACACTTTGAAAATACATCAACGGGTTCATACCGgtgAGAGACCCTACAAGTGTAAGCATTGTAATTCTGCTTTCAGTCAATCAAGCGGTTTGAAAAAACATCAACTGGTTCACTCTGgTGAGAGACCCTACAAGTGTAAAGATTGTAATTTTGCTTTCGGCGATCTAAGCAATTTGATAAAACATCAACTGGTTCACTCTGgTGAGAGACCCTACAAGTGTAAGGATTGTAATTCTGCTTTCAGTCAATCAGGCGGTTTAATAAGACATCAACGGGTTCATTCCGgtgAGAGACCCTACAAGTGTAAGGATTGTAATTCTGCTTTCAGTCTATTAAACACTTTGAAAATACATCAACGGGTTCATACCGgtgAGAGACCCTACAAGTGTAAGCATTGTAATTCTGCTTTCAGTCAATCAAGCGGTTTGAAAAAACATCAACTGGTTCACTCTGgTGAGAGACCCTACAAGTGTAAGGATTGTAATTCTGCTTTCAGTCTATTAAACACTTTGAAAATACATCAACGGCTTCATACCGgtgAGAGACCCTACAAGTGTAAGCATTGTAATTCTGCTTTCAGTCAATCAAGCGGTTTGAAAAAACATCAACTGGTTCACTCTGgTGAGAGACCCTACAAGTGTAAGGATTGTAATTCTGCTTTCAGTCTATTAAACACTTTGAAAATACATCAACGGCTTCATACCGgtgAGAGACCCTACAAGTGTAAGGATTGTAATTCTGCTTTCAGTCAATCAGGCGGTTTGATAAGACATCAACGGGTTCATTCCAgCGAGAAGCCCCACAAGTGTAAGGATTGTGATTCTTCTTTCAGTCAATTAAGCAATTTAAGAACACATCAACTGGTTCACTCTGGCGAGAAGCCCTACAAATGTAAGGATTGTAATTCTGCTTTCATTCAACCAAGCAGTTTGAGAACACATCAACGTATTCACTCTGgcgACAAGCCCTACAAGTGTAATGATTGTAATTCTGCTTTCAGTCGATCAGGAAGTTTGAGAAGACATCAACGAATTCATTCCGGTGAGAGACCCTACAAGTGTAAGGAGTGCGTTGCTGCGTTCAAACATTCTAGCACTCTGAAGGCACATCAACGAATTCATTTCGGTGAGAAGCCATTCAAATGTAAGGAATGCGATGCTGCATTCAGTCAATCAGGCAATTTGAAAACACATCAATGGATTCATTCTAatGAGAAGCCCTACAAGTGCAAGGAATGCAACGCTGCATTCAATCATTTAGGCAGTTTCAAAGCACATCAACGTATTCATTCTAatGAGAAACCCTACAAGTGCGAGGAATGCGATGCTGCATTCAGTCAATCAAGCAGTTTAAAAACACATCAACGAATTCATTCTAATGAGAAACCCTACGAGTGCAAGGATTGCGATGCTGCTTTCAGTCAATTAGGCAGTTTGAAAGCACATGAACGGATTCATTCTCatGAGAAGCCCTACAAGTGCAAGGAATGCGCTGCCGCTTTCACTCAATTAGGCAATTTGAAAAGACATCAATGGATTCATTCCGatGAAAAGCCCTACAGGTGTAAGGAATGCGCTGCCGCTTTCACTCATTTATGCAATTTGAAAAGACATCAACGGATTCATTCTAatGAAAAGCCCTACAAGTGTAAGGAATGCGCTGCCGCTTTCACTCATTTAAGCAATTTGAAAAGACATCAATGGATTCATTCCGATGAAAAGCCGTTCGCGTGcgatatttgcaaaaaatcaTTCCGACAAAAGGGTACTTTGGCGAATCATATGGATATTCACAGCGgTAAAAAGTCGCACAAGTGCAACGTATGCCAAAAGGAATTTCGCCGTCGATCTAGTTTGAAGAAGCACCTAGAAGTCCACTCTAAAGAGAAGCTAGCGCAGCCTTAA
Protein Sequence
MDLINTSERNWDDTPVEIPPEVVQTIIGIERLQHEQFHNTTTVIPTITFDSLLLNHRASNSDYPNEALAELGPEFPRAELGAEFDGDQAPSGCDIELPKTNLNRVMYSNVREYGTDLCAEICPTSNNCGSGLEENSTITAIRIQLQQQREKFLALQENMLGLNGQIKQRYETILEFPRQLNTEHEFHRPNVPTIDQQLQLPLQTKVSSVYQVPTSEHFDGTHSEIAETIRTNQLSSLRYSGRMEHIQEIDILHSSTGDVTRSEDDAELHCKSEHPTPSYQEDSFNLSEESFRMKQVRSDQISKGETETSTRKPRDSPKRSKIYTCGECKKEFNWKGSLTVHLRIHSGEKPHKCKHCNSAFSQSSGLKKHQLVHSGERPYKCKDCNSAFSLLNTLKIHQRVHTGERPYKCKHCNSAFSQSSGLKKHQLVHSGERPYKCKDCNSAFSLLNTLKAHQRVHTGERPYKCKDCNSAFSQSSGLKKHQLVHSGERPYKCKDCNSAFGLLRTLKTHQRVHTGERPYKCKDCNSAFSLLNTLKIHQRVHTGERPYKCKHCNSAFSQSSGLKKHQLVHSGERPYKCKDCNFAFGDLSNLIKHQLVHSGERPYKCKDCNSAFSQSGGLIRHQRVHSGERPYKCKDCNSAFSLLNTLKIHQRVHTGERPYKCKHCNSAFSQSSGLKKHQLVHSGERPYKCKDCNSAFSLLNTLKIHQRLHTGERPYKCKHCNSAFSQSSGLKKHQLVHSGERPYKCKDCNSAFSLLNTLKIHQRLHTGERPYKCKDCNSAFSQSGGLIRHQRVHSSEKPHKCKDCDSSFSQLSNLRTHQLVHSGEKPYKCKDCNSAFIQPSSLRTHQRIHSGDKPYKCNDCNSAFSRSGSLRRHQRIHSGERPYKCKECVAAFKHSSTLKAHQRIHFGEKPFKCKECDAAFSQSGNLKTHQWIHSNEKPYKCKECNAAFNHLGSFKAHQRIHSNEKPYKCEECDAAFSQSSSLKTHQRIHSNEKPYECKDCDAAFSQLGSLKAHERIHSHEKPYKCKECAAAFTQLGNLKRHQWIHSDEKPYRCKECAAAFTHLCNLKRHQRIHSNEKPYKCKECAAAFTHLSNLKRHQWIHSDEKPFACDICKKSFRQKGTLANHMDIHSGKKSHKCNVCQKEFRRRSSLKKHLEVHSKEKLAQP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
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90% Identity
-
80% Identity
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