Bcop009097.1
Basic Information
- Insect
- Bradysia coprophila
- Gene Symbol
- retn
- Assembly
- GCA_014529535.1
- Location
- NW:1657-9474[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.5e-17 8e-14 51.7 0.1 29 89 4 62 1 62 0.93
Sequence Information
- Coding Sequence
- ATGGCCAAGTCAGTTTTAGACTTGTATGAACTGTACAATTTGGTAATAGCTCGTGGTGGATTAGTCGATGTCATTAACAAGAAATTGTGGCAAGAAATTATCAAAGGACTACATCTACCATCCAGTATAACGAGTGCAGCATTCACGCTACGAACACAATATATGAAGTACCTGTACCCATATGAgtgtgaaaagaaaaatttaagtaCTCCTGCTGAACTCCAAGCGGCTATTGACGGCAATCGACGTGAAGGTCGCAGATCCAGCTACGGTCAATTTGATCAACAAATGCAGGGACAACTACAAATgCAACGGTCACCCACTGGTCTGCAGCAAATGTCACCCTTATCATTAGTCACTCACGGCAACGCACCAAATTCACACCATCGTATGATGGGCGGACCACCGCTTGGACAGATGGCAAATGTAGTACCACACGACATCGAACAGCGTATGATTGaatacataaaaatgtttcaaccGAAAGAGCCAAGACGTTCCCAAAGTCCTGAATTGTTGCAACGGGATGCATTAAATGCATTGGAAATGTCAAGAGTGGCCCTTTGGTCGATGTACAATAATAACACAAGCCCACCAGTTTCAATAAATACAATAAGTCCGCCGAACCATGAACCACAAAGAGAGGCACTAAACCTAGCTGAATCTCCACCACACATTCCTAACGTTAAACGAGAACGTGAACGATCGAGCGATTACCATGAAAGAGACAGAGATATTCCGTGCGAGCCACCGCAGAAACGTGCCGTGCCCATCGATAAGTCATTGCAAAGACACAATTCGTCGTCGATGCACCACGACGACCGGTCTAGAACGCCAATGAATGATCATGACGTTTCCGACGATCCCGCTCATTCATCCTCACCGATCCGCAATGGCATTTCTAACATATCGTCAGGTTCGACGACGACTGTACTGTCGGGAATGCAATTCAAAATAACTAGTCGCGGCAATGCAGCTAACGGCGAGCAACAATTGGTTGTGACAATGGAATTGAATGGAGTTCAATATGAGGGCGTGCTATTTGCAAATCCAACCACAAATTCGACGAATGCTTCAACGCCGACGAAAACCAATCCAAATAGCAGTCACAATCCGATCGATGAAAGAGAAACGAACCGAGTTGCTCGGCCACTCGTATCATCGTAA
- Protein Sequence
- MAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQFDQQMQGQLQMQRSPTGLQQMSPLSLVTHGNAPNSHHRMMGGPPLGQMANVVPHDIEQRMIEYIKMFQPKEPRRSQSPELLQRDALNALEMSRVALWSMYNNNTSPPVSINTISPPNHEPQREALNLAESPPHIPNVKRERERSSDYHERDRDIPCEPPQKRAVPIDKSLQRHNSSSMHHDDRSRTPMNDHDVSDDPAHSSSPIRNGISNISSGSTTTVLSGMQFKITSRGNAANGEQQLVVTMELNGVQYEGVLFANPTTNSTNASTPTKTNPNSSHNPIDERETNRVARPLVSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00245177;
- 90% Identity
- iTF_00245177;
- 80% Identity
- iTF_00245177;