Bcop009181.1
Basic Information
- Insect
- Bradysia coprophila
- Gene Symbol
- retn
- Assembly
- GCA_014529535.1
- Location
- NW:2391-29925[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1 1.9e+03 -0.8 0.1 9 40 76 107 73 116 0.67 2 2 1.3e-18 2.4e-15 56.5 0.0 2 63 213 274 212 278 0.94
Sequence Information
- Coding Sequence
- atgCTTGTGAAAAAAGAAACAGAGTCGGATGCAAATTCACATGGAGATGATCATTCAGATCGTGAAGATGACATGAGAGACTGCGATTCAAGCGATGAAGGTGTTAATGTAAATTCACATATGAATGGTAATAACGGTATGGATTATCAAAGAAGTCCCACACACAATACAGATTCATCACATTTAAGTCATCATACACAATTTCCAGTCAATCCATTAGGCATGTTAGGAAATTTTATGGGAGTACAGAATTTACAAAGTCttcaaaatttaccgaacATGCAACACGGCGATGTgctagaaaaattaaaaatgcaagTACGTGAAATGAAAGTTGGTTTGATGGATCAAGACTTTCCACTTCATTCATTCAACTCATTACACACACCACCAAATACATCATTCACATTGCCGCCAAGTACAAATCACAGTCAACCGCAAAATCTCAGTCAACAGTCACAAAACGGATTTTCGTTTACTCCACCGAATGCTCCGCATGCCAAAGATGGCAATCCAGGATCGAATTCATCAACATCAAGTGAAACATCAAATTCTTCTCAACAAAATAATGGCTGGAGCTTTGAAGAACAATTTAAACAAGTTAGACAGTTATATGAAATTAACGATGATCCAAAGAGGAAGGAATTCTTAGATGATCTGTTTTCATTTATGCAGAAGAGGGGATCGCCAATCAATCGTCTTCCGATAATGGCCAAGTCAGTTTTAGACTTGTATGAACTGTACAATTTGGTAATAGCTCGTGGTGGATTAGTCGATGTCATTAACAAGAAATTGTGGCAAGAAATTATCAAAGACTACATCTACCATCCAGTATAA
- Protein Sequence
- MLVKKETESDANSHGDDHSDREDDMRDCDSSDEGVNVNSHMNGNNGMDYQRSPTHNTDSSHLSHHTQFPVNPLGMLGNFMGVQNLQSLQNLPNMQHGDVLEKLKMQVREMKVGLMDQDFPLHSFNSLHTPPNTSFTLPPSTNHSQPQNLSQQSQNGFSFTPPNAPHAKDGNPGSNSSTSSETSNSSQQNNGWSFEEQFKQVRQLYEINDDPKRKEFLDDLFSFMQKRGSPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKDYIYHPV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -