Bgla007790.1
Basic Information
- Insect
- Brachypterus glaber
- Gene Symbol
- nfxl1
- Assembly
- GCA_958510825.1
- Location
- OY294045.1:4977578-4996628[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 0.91 1.6e+04 -3.0 1.3 14 19 163 168 163 168 0.84 2 18 0.13 2.3e+03 -0.3 0.4 4 10 199 205 198 205 0.95 3 18 3e-08 0.00052 20.9 17.0 1 19 213 230 213 230 0.99 4 18 3.2e-06 0.056 14.4 16.9 1 19 266 284 256 284 0.86 5 18 0.7 1.2e+04 -2.7 1.9 6 10 309 313 308 313 0.90 6 18 5.5e-09 9.6e-05 23.2 10.9 1 19 319 337 319 337 0.97 7 18 3.5e-05 0.61 11.1 8.6 1 18 372 389 372 390 0.95 8 18 0.99 1.7e+04 -3.1 1.3 1 4 399 402 399 402 0.97 9 18 5.5e-05 0.96 10.5 17.1 1 18 424 441 424 442 0.94 10 18 2.7e-10 4.7e-06 27.4 14.1 1 18 451 468 451 469 0.97 11 18 0.69 1.2e+04 -2.6 1.1 5 10 497 502 497 502 0.94 12 18 0.00016 2.8 9.0 5.9 10 19 518 527 515 527 0.89 13 18 0.05 8.6e+02 1.0 5.6 4 12 539 547 537 547 0.86 14 18 2 3.5e+04 -6.9 4.5 14 18 575 579 575 579 0.86 15 18 0.00076 13 6.8 4.3 1 11 616 626 610 627 0.82 16 18 0.59 1e+04 -2.4 1.5 14 18 639 643 639 644 0.84 17 18 2.4e-06 0.041 14.8 17.9 4 19 657 672 655 672 0.93 18 18 2.1e-06 0.037 15.0 11.3 1 16 715 729 715 735 0.93
Sequence Information
- Coding Sequence
- ATGAGTTTTAAGGCTTCAAATCCTTGGACCAAAAACCAACCGCCACAGAAAAAGTCtccaaagaaaaaaagtttaccgACTCCAGCCGAACAAAAAACTGGCGAAAAGAAGTTCAAGGAAGCTCAATTAAAATTGCAAGCTGCTGTTAAGAAGCACACCAAAGATTATGAGTCCTCTTCTGATGAAGATGACTTGGAGACAAATTCATTAATTGATTCTATcctaaaaagttatacagaaactGGTGGAAGTAATGAGCAACTGGGAAGGACACAATCTTTTCTGGAACAAGCATTTTTATCTGGAGCTGCAACATGTCTGATTTGTATTTCCAGAATCAAACGTGACAATGAgatttggAGTTGTATGAATTGTTATGGATTCTTTCACCTGATGTGCATCCAAAGATGGTCAAAGGACACAATCACTCACCAAAAACAAGCCCAAGAAGGTCAGATTATCGTAAATCATTCCAAACTAGCCTGGAACTGCCCCAAATGTAGACACGACTATTTGCCAGAAAACATTCCAACAAAATATGAATGCTTTTGCAGGAAAACGGTCAATCCCAAGTTTGAACCGTATTTGGTACCGCATTCTTGCggtgaaatttgtaaaaaggaCCTTATTCCGGCTTGTGGACATAAATGTTTGCTACTTTGTCATccaggcCCATGTCCACCATGCCCCGTCACCATAAGCGTCACATGTTACTGTGGTTCGGAAGCCCCGATATCGCAAAGATGCAGTAACCGGGAATGGTCTTGCGGAAAGACTTGCGGAAAACTCCTTTCCTGCGAAAAACACACTTGCGCCGATCCGTGTCATTTGGGTGAATGCAAACCATGCCCGAAAAAGAGCATCCAGAAATGTATGTGCAAGAATCAGCAGAAACTTAGGGATTGCGCCACTCCTATTTGGCAGTGTGAAAAGGTTTGTAACAAACCACTAGAGTGCGGTAACCACAAGTGTCCGGATGTTTGCCATGCTGGTGTCTGCGATGTGTGCCAACTAAGCAAGCAGAGAACTTGCCCATGCGGTAAAAACAAGTACCAGCTGCCCTGTACCGTGGACACACCCAGTTGCCTGGATACCTGTGAAAAGGTTTTGGAATGTGGAGTTCATACTTGCAACTTGAGGTGCCACAAGGAAAAGTGCAGTTTGtgTTTAGAGATTGTAGAAAAGTCGTGCAGATGTGGGCAACATATTAAAGAAATACAGTGTTGCAAACCTTATATTTGTGAAACCAAGTGCAAAAATATACGAGATTGTAACAAACATCCCTGTAACAGAAAATGTTGCGATGGAAACTGTCCACCTTGTGAAAAACCATGTGGTCGTACATTGAACTGTGGTAACCATAAATGTCCGTCAGTCTGTCACAGAGGTCCATGTTATCCATGCAATTTGACTAATTCGGTCAGTTGTAAATGTGGGCATACCAAAATAACAGTGCCCTGTGGTCAAAAGCATAAGACTAAACCGCCAAAGTGTTCCAAACTCTGTTTgaacCCCCCGGATTGCCACCACGAAGCTAGAGACAATCACAGATGTCATTTCGGTGACTGTCCACCATGCAAGCAAACCTGTAGTCAGGACAGACCGAGTTGTGCCCACCCGTGTTCGGCAAAATGTCATTCCTCCATCATGGTCAAAATAGAAGCCCAGAAGGCGTCTATGCCATGGGAGCAACAAAAACCTCAACTGGAAAGAAAATCATTACCGTGTCCGGATTGTGTTGTTCCGGTTTCTGTCACTTGTCTGGgTAAACATGAAACTGCGAATTGGCCATGTCATATGGCTTTACCTTCAAGCTGTCAAAGGTCATGTGGCCGTCTATTGGACTGTCAAAACCATACCTGCATACTGTTGTGTCATTTGGTTATAGGAGGCACTGAAGAAAGGgcCGGCTCAAACTGCGAGCCATGTGAGGGTATCTGTACCAAGGAAAGACCAGAAGGTTGCGACCATTCCTGCCCAAAACCCTGCCATCCGGGCGACTGCCCGCCGTGCAAACAAATGGTCAGGATCCGGTGCCATTGCGGTTTAAACCAGACGTACGTGGCCTGCCATCTCTGGTTGCAGTTGGAAAACAGAGAAGAGATTCAGAGTTGCGGCAACCAGTGTCCCAGAAATTATCCTTGTGGACACAGATGCAAGACAAACTGTCATTCAGGACCATGTCCAAATGCCGATTTAtgcaagaaaaaagtaaaagtgaCATGCAAATGTAAAAGGTTGAAAAAAGAATTCCAATGTGAAACCgtcaggaaaaatcaagctaTAGTAGAATGCGATGACATCTGCAAACAGAAGAAAGAAGAGGATAGAAAAATACGCGAGGAAGCAGAAGCACAGAAGAAAAGAGAAGAAGAATTAAAGAACGCCAAAGAACTGGAAAAATACCAAAAGATGTTTGAAGGAAAGAAGAGAACTAAGGAGAGAAAGGCAATAGAAGTTGAAGAAGTCAGTGTTTTACAGAAGTTCAAGTTTGCGTTTTTGTTGGGttttttgatattattatttGGTGTCATTTATATGGCACTCAAATAG
- Protein Sequence
- MSFKASNPWTKNQPPQKKSPKKKSLPTPAEQKTGEKKFKEAQLKLQAAVKKHTKDYESSSDEDDLETNSLIDSILKSYTETGGSNEQLGRTQSFLEQAFLSGAATCLICISRIKRDNEIWSCMNCYGFFHLMCIQRWSKDTITHQKQAQEGQIIVNHSKLAWNCPKCRHDYLPENIPTKYECFCRKTVNPKFEPYLVPHSCGEICKKDLIPACGHKCLLLCHPGPCPPCPVTISVTCYCGSEAPISQRCSNREWSCGKTCGKLLSCEKHTCADPCHLGECKPCPKKSIQKCMCKNQQKLRDCATPIWQCEKVCNKPLECGNHKCPDVCHAGVCDVCQLSKQRTCPCGKNKYQLPCTVDTPSCLDTCEKVLECGVHTCNLRCHKEKCSLCLEIVEKSCRCGQHIKEIQCCKPYICETKCKNIRDCNKHPCNRKCCDGNCPPCEKPCGRTLNCGNHKCPSVCHRGPCYPCNLTNSVSCKCGHTKITVPCGQKHKTKPPKCSKLCLNPPDCHHEARDNHRCHFGDCPPCKQTCSQDRPSCAHPCSAKCHSSIMVKIEAQKASMPWEQQKPQLERKSLPCPDCVVPVSVTCLGKHETANWPCHMALPSSCQRSCGRLLDCQNHTCILLCHLVIGGTEERAGSNCEPCEGICTKERPEGCDHSCPKPCHPGDCPPCKQMVRIRCHCGLNQTYVACHLWLQLENREEIQSCGNQCPRNYPCGHRCKTNCHSGPCPNADLCKKKVKVTCKCKRLKKEFQCETVRKNQAIVECDDICKQKKEEDRKIREEAEAQKKREEELKNAKELEKYQKMFEGKKRTKERKAIEVEEVSVLQKFKFAFLLGFLILLFGVIYMALK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -