Bgla014255.1
Basic Information
- Insect
- Brachypterus glaber
- Gene Symbol
- stc
- Assembly
- GCA_958510825.1
- Location
- OY294046.1:61944743-61958114[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 2 3.4e+04 -4.1 3.0 6 10 354 358 350 358 0.61 2 14 0.085 1.5e+03 0.3 0.4 4 10 384 390 383 390 0.96 3 14 6.3e-06 0.11 13.5 12.1 4 18 399 413 397 414 0.94 4 14 2e-08 0.00034 21.5 15.4 1 19 450 468 450 468 0.98 5 14 5e-09 8.8e-05 23.4 11.1 1 19 508 526 508 526 0.99 6 14 3.9e-06 0.068 14.1 13.5 4 19 573 588 566 588 0.87 7 14 1.3 2.3e+04 -3.5 2.0 5 10 617 622 617 622 0.93 8 14 0.0047 82 4.3 9.0 1 11 628 638 628 639 0.96 9 14 1.4 2.5e+04 -3.7 0.8 4 10 643 649 642 649 0.69 10 14 3.6e-09 6.2e-05 23.8 14.3 1 18 655 672 655 673 0.97 11 14 1 1.8e+04 -3.2 0.8 5 10 701 706 701 706 0.85 12 14 0.00085 15 6.7 15.4 1 19 712 729 712 729 0.92 13 14 1.8e-05 0.32 12.0 13.5 3 19 767 784 755 787 0.90 14 14 5.1e-05 0.9 10.6 18.1 1 18 794 812 794 813 0.93
Sequence Information
- Coding Sequence
- ATGCCAGTGGCCAGTGACACGCAAATATCGGCGTATGGTAACGACTTTTTTGATGAGAGGCAATTTTTGCCTTTCGCAATGGCTGGCTACAATAATTTATCAAATTTCTACGAAAATCCACCTCAGGGTCCAAGTGTGATGAACCAAGAAATTTCGAGAAACATTGATATCagtacttcaaatttggaacctACTGCTCAAGAATTCCATCCACAAAATAGAAACAATGGTGCCACTAAAAAAGTATACTCTAATAGACCTAATAAATATCAGAATCGAtctaaatattacaataaaagtaattattccGAAGATCGGAACAAGATTTTAGATGAAACTAAGCAATTTTTACAGAGTTTTAATCAGGTAAATAATGATGATAATGTTTCAGTATCCAGTTATCATTCGAATAGCTCAAGGCCCAATAGCTCTAAAAGATATTCGGAAAATAGGAACAAAAATAGGCAAGATGAAAATACTCAATCAAAAGGAAATACGGAAAGGTATAATTCACACAAAAATGGatatagtagtaatagtaggtACTATGATAATAACAGTGGTTATAATGGTTATAAAAATCATAGAAGTGATAATCATAGGGGTGAAAATCATAGGAGCGATAATCATAGGAGCGATAATCATAGGAATGAAAATTATAGGAGTGATTTTTATCAAAGGAGAAATTATGGTGAAAATGAAGAGTTGAGAAATAGTCCCACAGAGTTTAATAGTAGGGAGTCATATAATCAAAGGAATAGTAGTTATAATGATAAAAGAGCTAAGAATAATTATTATGATAGAAATAATTGGCGGGCCAATAATGAATATTATGTTAAAGAAaaggacaaaaataaaaaatTGGATGCAGCATCACAGAGGGATCGTCTAGAAGAAATGTTAAACCGCAGAATGTTGGAATGCCTTGTGTGTTGcgaaaaaataaagaacaatGATAAAGTATGGTCATGTAAACAGTGTTACCACATTTTACATCTAAGCTGCATAATTTCCTGGGCAAAATCTTCTAAAATAGAGAGCGGTTGGAGGTGTCCTGCATGCCAAAACGTTTGTGATTCGATTCCAAAAACGTACACTTGCTATTGTGATAAAACGATCGACCCCAAATTGGATCCAGGTATCATTCCACATAGCTGTGGCGAAGTTTGTCTACGGAAAGGCCGCACCTGCGATCACAAGTGCACCATTTTATGTCATCCAGGGCCTTGTCCAGACTGCATAGTTATGGTGAATAAGCCCTGTGGATGTGGAAAAACGAAGCAAAGCGTAAAATGCTGCACAGAAATGGAGTTAGTATGCGATTCAGTGTGCGAAAAATACCTGGAATGTGGAATTCACAAATGCAAAGCACAATGCCACCCTGGGGAGTGTGAACCTTGCCAGAAGCGGATCGTCCAGGAATGTTATTGCGGAAAATTGGGCAGAAAAGTTCCCTGCACCTCAGAGCACAAAGGCTCAACGAAATTCTTTTGTGATGATGTTTGTGATAATTTGTTGTCATGTGGAAATcacaaatgcacaaaaatgtgTCATGCAGGTAGCTGTGACATGTGTCCAGTAGATGTTAGTCTAATTAAAACTTGTCCATGTGGTAAAACTCTTCTGGAAAAACCGAGAACGTCTTGTCTGGATCCAGTTCCCAGCTGTGGAAAgaCCTGTGGAAAGAAATTGGTTTGTGGACAACCAAGTGCTCCTCACGTTTGCGAATCAAAATGCCATCTTGGCGCATGTCCTCCATGTCCCATGACGACCCTGGTTAGATGTAGATGCGGCCATATGGATAAGGAACTAGCCTGCGAAAATGTCACCACCAAAGCAGATGACGCGAGATGCGAGAAAAAATGTACAAAGAAACGCCTTTGTGGCAAGCACCGCTGTAACCAACGCTGTTGCATCGAGATCGAACACTTCTGTCCACTACCATGCAACAAGCTGCTGAGTTGCGGCCAACATCGCTGCGAGCGTACCTGCCACAACGGCCGTTGTCCCCAATGTTTGGAAACCAGCTTCGAGGAGCTCTATTGCGAATGCGGGTCTAGCGTCATCTACCCGCCGGTGCCGTGTGGTACCAAGCCACCTAATTGTAACAAGCCTTGCTCGCGCCAGCGCCCTTGCGGTCATGAAACGAACCACAGTTGTCACACCGGCCCGTGCCCTCCGTGCACTATATTCGTGAAGCGCTGGTGCTACGGAAAGCACGAGCAACGGGCAGCCATACCCTGTCACCAAACGAACTTCAGCTGCGGACTGCCCTGCAGCAAAGATATGCCCTGTAAAGAGCACAAATGTATCAAGCCCTGTCATGATGGAGAATGCACCCTACCTTGTAAACAGCCCTGCACTAAACCTAGGTCTTTATGTGGGCATCCATGTGGAAAGCCATGCCACAAAGGGCCCTGTCCTGAAACCAGCTGTAGGTTCAGTGTCAATGTTACTTGTCAATGTGGTTTGTTGAAACAAGCCAAGTTATGCATAGATGTAGCTGATGAATATAGAAATTTAGAAATGTCTAGAATGAAGGATAAGCTGGGAGATTTAGCCAAGGAGCATTCTAGTGTTGATATCTCAGAGTTAGTGGCCAAACCTAAAAAACCTGCTGTACTGAAAATacTGGAATGTAATGATGAATGTAAAATATACGAGCGAAACCGAAGATTGGCAATAGGTCTACAGATTCGAAACCCCGATTTAAGTCAAAAGTTGACCCCACGTTATTCCGATTTTATGCGTCAGTGGGCGAAAAAAGACAAAAACTTTTGCCAAAAAGTACACGATAAGTTGACAGAACTGGTGCAATTAGCCaaacaaagtaaacaaaaaagcCGCAGCCACTCTTTCGACTCCATGAACAGAGACAAACGCCATTTTATTCACGAATATTGCGAACATTTCGGCATAGAAAGCGCCGCCTATGATCCAGAGCCGAACCGAAATGTAGTGGCAACAGCGCTACGTGAAAAATCATGGTTGCCAAGCATTAGTTTAATGGAGTTTGTCCAAAGGGAAAATGGACAGAGAAAAGTTCCAGGACCAGTAAGCCTAAATGAGAGCCCCAGTACCTCTTCAGCCTCAGCCCCTGTGACCTTAATGCTGCCTGGGAGGTCTATCAAAACTGCCACGCAACCTGTAGGTGAATTTATCGACTATTTTAATAACCCCTAG
- Protein Sequence
- MPVASDTQISAYGNDFFDERQFLPFAMAGYNNLSNFYENPPQGPSVMNQEISRNIDISTSNLEPTAQEFHPQNRNNGATKKVYSNRPNKYQNRSKYYNKSNYSEDRNKILDETKQFLQSFNQVNNDDNVSVSSYHSNSSRPNSSKRYSENRNKNRQDENTQSKGNTERYNSHKNGYSSNSRYYDNNSGYNGYKNHRSDNHRGENHRSDNHRSDNHRNENYRSDFYQRRNYGENEELRNSPTEFNSRESYNQRNSSYNDKRAKNNYYDRNNWRANNEYYVKEKDKNKKLDAASQRDRLEEMLNRRMLECLVCCEKIKNNDKVWSCKQCYHILHLSCIISWAKSSKIESGWRCPACQNVCDSIPKTYTCYCDKTIDPKLDPGIIPHSCGEVCLRKGRTCDHKCTILCHPGPCPDCIVMVNKPCGCGKTKQSVKCCTEMELVCDSVCEKYLECGIHKCKAQCHPGECEPCQKRIVQECYCGKLGRKVPCTSEHKGSTKFFCDDVCDNLLSCGNHKCTKMCHAGSCDMCPVDVSLIKTCPCGKTLLEKPRTSCLDPVPSCGKTCGKKLVCGQPSAPHVCESKCHLGACPPCPMTTLVRCRCGHMDKELACENVTTKADDARCEKKCTKKRLCGKHRCNQRCCIEIEHFCPLPCNKLLSCGQHRCERTCHNGRCPQCLETSFEELYCECGSSVIYPPVPCGTKPPNCNKPCSRQRPCGHETNHSCHTGPCPPCTIFVKRWCYGKHEQRAAIPCHQTNFSCGLPCSKDMPCKEHKCIKPCHDGECTLPCKQPCTKPRSLCGHPCGKPCHKGPCPETSCRFSVNVTCQCGLLKQAKLCIDVADEYRNLEMSRMKDKLGDLAKEHSSVDISELVAKPKKPAVLKILECNDECKIYERNRRLAIGLQIRNPDLSQKLTPRYSDFMRQWAKKDKNFCQKVHDKLTELVQLAKQSKQKSRSHSFDSMNRDKRHFIHEYCEHFGIESAAYDPEPNRNVVATALREKSWLPSISLMEFVQRENGQRKVPGPVSLNESPSTSSASAPVTLMLPGRSIKTATQPVGEFIDYFNNP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -