Basic Information

Insect: Brachypterus glaber
Gene Symbol: -
Assembly: GCA_958510825.1
Location: OY294052.1:27081471-27090743[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.007 0.39 12.2 2.6 2 23 151 172 150 172 0.96

2 16 0.0001 0.0057 18.0 6.3 1 23 177 199 177 199 0.98

3 16 0.00071 0.04 15.3 5.2 1 23 205 227 205 227 0.97

4 16 0.047 2.7 9.5 1.7 3 20 235 252 233 252 0.97

5 16 7.3e-05 0.0042 18.4 1.1 1 23 261 283 261 283 0.96

6 16 0.002 0.11 13.9 0.3 1 23 511 534 511 534 0.97

7 16 2.1e-05 0.0012 20.1 5.7 1 23 540 562 540 562 0.98

8 16 1.8e-06 0.0001 23.5 4.8 1 23 568 590 568 590 0.98

9 16 1.3e-05 0.00076 20.7 0.9 1 23 596 619 596 619 0.95

10 16 0.00012 0.0068 17.7 0.5 1 23 633 655 633 655 0.98

11 16 0.0057 0.32 12.4 7.9 1 23 661 683 661 683 0.98

12 16 4.5e-06 0.00025 22.2 0.5 1 23 690 712 690 712 0.96

13 16 2.8e-05 0.0016 19.7 1.3 1 23 718 740 718 740 0.98

14 16 8.4e-07 4.8e-05 24.5 0.9 3 23 748 768 746 768 0.96

15 16 4.1e-05 0.0024 19.2 0.1 1 23 774 796 774 796 0.99

16 16 0.12 6.6 8.3 0.7 1 23 801 824 801 824 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.007	0.39	12.2	2.6	2	23	151	172	150	172	0.96
2	16	0.0001	0.0057	18.0	6.3	1	23	177	199	177	199	0.98
3	16	0.00071	0.04	15.3	5.2	1	23	205	227	205	227	0.97
4	16	0.047	2.7	9.5	1.7	3	20	235	252	233	252	0.97
5	16	7.3e-05	0.0042	18.4	1.1	1	23	261	283	261	283	0.96
6	16	0.002	0.11	13.9	0.3	1	23	511	534	511	534	0.97
7	16	2.1e-05	0.0012	20.1	5.7	1	23	540	562	540	562	0.98
8	16	1.8e-06	0.0001	23.5	4.8	1	23	568	590	568	590	0.98
9	16	1.3e-05	0.00076	20.7	0.9	1	23	596	619	596	619	0.95
10	16	0.00012	0.0068	17.7	0.5	1	23	633	655	633	655	0.98
11	16	0.0057	0.32	12.4	7.9	1	23	661	683	661	683	0.98
12	16	4.5e-06	0.00025	22.2	0.5	1	23	690	712	690	712	0.96
13	16	2.8e-05	0.0016	19.7	1.3	1	23	718	740	718	740	0.98
14	16	8.4e-07	4.8e-05	24.5	0.9	3	23	748	768	746	768	0.96
15	16	4.1e-05	0.0024	19.2	0.1	1	23	774	796	774	796	0.99
16	16	0.12	6.6	8.3	0.7	1	23	801	824	801	824	0.97

Sequence Information

Coding Sequence: ATGGAGGAAGATACTGTGGATTTAAATATGGTTTGTAGAACGTGCAAAAATGTCTCTGAGGACATGCGAAGTGTTTTTGAAGCCATCGATATGACCGAAGAGATTCCCCGTATCGACGAGATGCTAATGGCCTGTACCTCAATAcaggttTCCACTAACGACGGCCTACCGCAACTGATGTGTCGAACATGTTTGGATCAGCTGAAAATAGCTTTTGTTTTCAAGGAAAAAGCAACAAAAACAGAAGCCAGTTTAAAAGAATacgtaaaaagtttaaaagttaacgATATAAGTGATATTAAACAAGAACTGCAAAGTTCTGACTTCATGGaaaCATTGAACACCTTGTTCCAAGAAACCACCCGCGAAAATGCAAACGAAAATCCCCAAAACACCCAACAACTATCTACCGATTTCATCCAAATCCTTGAAAACAACCAAATGCTCCTGACATGCCGCGAGTGTAACAAAGTTTTCACCACTCTGGAGGGTCTACGATGTCACAAACGCGTCCACCTAGGGGGCATGTTCAAGTGTAAACACTGCGATAAAGAATATACAAGATTGAACCACCTTCAAAGACACGAATTGTCACATGGCAGAAGAAAAGTCCATGTTTGCAGGATATGCAATAAAACGCTAACCCGCATGGAACACTTAAAACGTCACTTAACCACACATCTCAGGGAAAAACCGTTTGGTTGCAAGACTTGCAACCGTGGGTTTAATCGCGTAGAACACTTACATAACCATATACCCAGGTGTAAGGGCGATCTAGTTCATATTTGCAATGTATGCAACAAAGCTTTTAATCGTGAAGACTCTTTAGAAGTGCATAAAAAACTTCACGATAATCTCCAACCTGTATTACCTACTATTGAAAACTTAGACAACATCGAAGACCATTATTATGAAATAGACTACGATGCTTCAGCAATGACGTTTTCTGATGTTTCTGATGTCGAAGATTGTTTTGAGCCTCAGGTTGAGGTGACAGAGAACTATGATgaggataaaataaaaaatgtagctGAAATATCGGGACAAGAGATTCAGGAAGACCTGGATGATGACGATATAGATGACCATATGGATCATCATATGGATGACAATGGGGATGATAACCATTCTGTGGATGATAACCATTCTTTGGGAGAAATCCCGCCTGTACCGTCTCAGAACAATGTTGATGAGGATGACGAGCCCCTGATTGCTACTATTACGAAACAGGAACATCTCTTGGAGGATTTGCAGGAGGAAGATTTGATTAAACATTTGCCGCCTGTTGAAAACAATTTTGTTGAAGAAGAAGGTGATTATTCTGATGAAGGTGACATCAGTGATGAAGAGTACAAACCGCACAAAAAAATGTCACCCTACAAACGCAGTAGAGGCCGTCCACGCAAAAACTCGTCGACTACGTCGCCGCCGAAAATCAAACCTCTGAAGATTCCCGGTAGAGGTCGCGGCCGTCCCCCAGGTTCCCGGATCAAGAAGGAACCGCTTTCTGACGAGGAGATTGTAGGGGAGTTCCCGTGTCCCATTTGCCAGCTGATCTTTAGGACAGTGCAAAAGTTGGATAAACACGCGAGGAGGACGCATATTGGTATTAAGATCCATAAGTGCGGTATTTGCAGTAAGGAGTTTAGCagaaataacCACTTAAAGAGACATTTACAATCCCACTCCATGTCGAAGCCATATCAATGTCAAATCTGCACAAAGAGTTTCAACAGAAAAGACCACCTGAATCAGCACCAGAAGCTGCACGAGCGGCAGCAGGACTACGAGTGTGACATTTGCCAGAAACCCTTCAACAGGGCGGATCATTTGGCCAAACACAAAGCGTCCAAACACGGGATCGGAGAGAAGCTCtgtGTTATGGGCGAGAAAAAATACACATGCCCCATCTGCAACAAGGCGTTCACAACCGAAAAATACCGCGACGTCCACATGAAGGGCCACAACGGCGAAAAACAGTTCCAGTGCAAAACTTGTGATAAACATTTCCTCTCAAAGTCCCACCTGACAGAACACCAGAAATTCCACAACGAACATTCGAAGAAGTTCCTGTGCTCGGAATGTGGCCAGAGGTTTATTCGCAACGATTATTTGGTCATTCATATGAGGAGACATCGTGGGGAGAAACCGTTCAAATGCAAATTTTGCGGAAAAGgtTTTCCTCGTACTACGGATCTAACAGTTCACGAAAGATATCATACTGGAGAGAAGACGCATTTGTGTACAATTTGTGGACGAGGATTTGGCAGgGCCTACAATCTGACAGTTCACATGAGAACCCACACGGGCGAGAAACCCTACCAGTGCACTTACTGCGATGCGGCTTTCGCGCAGGGCAACGACCTGAAGGCACACGTGCGCAGACACACCGGCGAGCGGTTCCAGTGCGAACTGTGCACGGAAAGCTTCCTCATGGGCTACCTGCTCACGCAGCACAAAAGAACAGTACACGGTCTGAACGTGGTAAGTAATATCCGCCGTCTACAACCCCTCCACAAAATGGAGGAAAACCCCGACGACCCGCCCCCCATCACAATTCCCCTCCCCAAACCCGTCGTGCCCGACAGTTTACTCAATTCCCTTCAGCACCAGCTCGCTGTGGCCCAACTGCACCACCTCGCCCGGCCGGAATTGCACCAGGTGCATTTTGCCGTCAAAAACGAGGCGAGGTCCGAGGGACAGGTGCACCAGGTGCATTTTGCTGTTAAAAATGAATCGAGCATGGAGGGGCAAGTGCACCAGGTGCATTTTAACGTCAAAAATGAATTGCCCATCATATCTACGATTGAACACCAGTTGCAGGGACATCCTATGTAG
Protein Sequence: MEEDTVDLNMVCRTCKNVSEDMRSVFEAIDMTEEIPRIDEMLMACTSIQVSTNDGLPQLMCRTCLDQLKIAFVFKEKATKTEASLKEYVKSLKVNDISDIKQELQSSDFMETLNTLFQETTRENANENPQNTQQLSTDFIQILENNQMLLTCRECNKVFTTLEGLRCHKRVHLGGMFKCKHCDKEYTRLNHLQRHELSHGRRKVHVCRICNKTLTRMEHLKRHLTTHLREKPFGCKTCNRGFNRVEHLHNHIPRCKGDLVHICNVCNKAFNREDSLEVHKKLHDNLQPVLPTIENLDNIEDHYYEIDYDASAMTFSDVSDVEDCFEPQVEVTENYDEDKIKNVAEISGQEIQEDLDDDDIDDHMDHHMDDNGDDNHSVDDNHSLGEIPPVPSQNNVDEDDEPLIATITKQEHLLEDLQEEDLIKHLPPVENNFVEEEGDYSDEGDISDEEYKPHKKMSPYKRSRGRPRKNSSTTSPPKIKPLKIPGRGRGRPPGSRIKKEPLSDEEIVGEFPCPICQLIFRTVQKLDKHARRTHIGIKIHKCGICSKEFSRNNHLKRHLQSHSMSKPYQCQICTKSFNRKDHLNQHQKLHERQQDYECDICQKPFNRADHLAKHKASKHGIGEKLCVMGEKKYTCPICNKAFTTEKYRDVHMKGHNGEKQFQCKTCDKHFLSKSHLTEHQKFHNEHSKKFLCSECGQRFIRNDYLVIHMRRHRGEKPFKCKFCGKGFPRTTDLTVHERYHTGEKTHLCTICGRGFGRAYNLTVHMRTHTGEKPYQCTYCDAAFAQGNDLKAHVRRHTGERFQCELCTESFLMGYLLTQHKRTVHGLNVVSNIRRLQPLHKMEENPDDPPPITIPLPKPVVPDSLLNSLQHQLAVAQLHHLARPELHQVHFAVKNEARSEGQVHQVHFAVKNESSMEGQVHQVHFNVKNELPIISTIEHQLQGHPM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -