Bgla020496.1
Basic Information
- Insect
- Brachypterus glaber
- Gene Symbol
- ZBTB41
- Assembly
- GCA_958510825.1
- Location
- OY294049.1:18213368-18226979[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.00072 0.041 15.3 1.7 1 23 223 246 223 246 0.95 2 13 3.5e-05 0.002 19.4 0.6 1 23 277 300 277 300 0.96 3 13 4.8e-07 2.7e-05 25.3 0.3 1 23 306 328 306 328 0.98 4 13 1.3e-05 0.00071 20.8 1.5 1 21 333 353 333 354 0.96 5 13 1.8e-06 0.0001 23.5 2.1 1 23 365 387 365 387 0.98 6 13 2.8e-05 0.0016 19.7 0.4 1 23 397 419 397 419 0.99 7 13 5.2e-05 0.003 18.8 0.5 1 23 425 447 425 447 0.98 8 13 2e-05 0.0012 20.1 1.8 1 23 453 475 453 475 0.99 9 13 2.9e-05 0.0017 19.6 2.6 1 23 481 503 481 503 0.95 10 13 4.5e-05 0.0026 19.1 3.2 1 23 509 532 509 532 0.96 11 13 0.0002 0.011 17.0 0.4 2 23 539 560 538 560 0.95 12 13 1.1e-05 0.00061 21.0 0.6 1 23 566 588 566 588 0.98 13 13 3.2e-05 0.0018 19.5 4.9 2 23 595 617 594 617 0.95
Sequence Information
- Coding Sequence
- ATGGAGGAAggcaaaataaaggaagaactGGAAATAAAAACAGAGGCGTTTATTGAAGAAGAAGTTGTCGAAGaacaagtttttgaaaatgtcgAAGAAGAGATTTATGAAGAAACCGAGGAGCAAATTGAGGGTGAAGTCATTCACTACCAGGTTGAGGAAAGAAGTAATGGTGTTGAATTAGAAGAAGTTGATGAAGATGGCAGAAAAATTCATACTCTTGTACTACAAAATGTCGAAATTGCTGATGACCAAGAAGTGCAGGAATCGACTGTAATAGAAAATTATGTTGTACACAACTCGGATGGAAATTTGCAGATTGATACTGTTGAGGATAACATTATTCATACATACATTATTGAAAATGTGGAATATGAAGAGGAGGAGCAAGAAGTCCAAGAGGATGAGGATCAAGAAATGGAAGAAGGGGAAGAAATGGAAGAAGGGGATGAAATGGAAGAAGGGGATGAAATGTATGAAGAACAAGAAATGGATGAACAAGAAATGGCTGGTAATCAGGTTGTCCAAATAATTAATGACTTTTCAGAGGACACTCTTGACACAACAAATTCTCAACAAGAGACTCAAAATAAATCACATGAAACCTATGCTGATGAATATGTGGATGACCCCCAAATGGTTAAAGTGGTTACAAAGCGTGAAGTACATGAATGTGACAGTTGCTTTAAGTCTTTCCAAACTTCAACTGGTTTGAAAAGGCACATTGCTGTAACGCACGGGGAACAAAATAAAGATGAAGATCCTTTAACATTTCAGTTGTGCCCCTGCTGTGGTGAACCCTCTGATTCGGGCCACAATgTTGGTGAATTCAGATGTGATGTTTGTGACAAAAAGTTCATCCAGAAAAAAAGTCTGGGCCGTCATGTAAGCATTGAACATCCTGAGAATGACAAATATATATGTTCCGAATGTAAAAAGGATTTTAAGAGCAAAGAGGAGCTTATCGCACACATGCGCGTTCATCCTATCACAACTTTCAAATGCATGGGATGCGAGAGAGAGTTCACCAGGAAGTATCATCTGGAGAGGCACATGCTACAAGCTGGCTGTATGGGAGTTacccaaaaagtttttaaatgtaatGTTTGTGCAAAATGTTTCACGAGAAAAGACAATCTGGCCGAACATCTTCGTGGACACATAGGCAATCAAAAACCGAAAACGATTTTCAAGTGCGATTTCTGCCCGAAAATGTTCAAGGGCCTGCCCCTGTTGAACATCCATCTGCGTACGCATACCGGCGAGCGACCGTACCCGTGCGACTTTTGCGAAAAGAGATTCCCGTCAAGTGGGGCCATGATGAAACATAGACGCATGCATACCGGGGAGAAGCCCTACAAATGTCAAGTTtgtggaAACTGTTTCGCCGCCAAAGAGACCCTGAATCGTCACGTCCGGACCCACACCGGAGAAAAGCCGCATTCCTGTAATTTTTGCGGGAAGTCGTTCATCCAGGCGGCTCAGTTGCGCGCGCACATTTTTCACCACACTGGCGAGAACGCGTACGTGTGCCCGCACTGCAACAAAGCCTTCAACCGGAAGTTGCGCCTTACCACCCATATGAAGTTTCTACATGAGGGCGCCAAACCCTTGGAATGTAAGGTTTGCCAGAAACCGTTTTTCAGAAAGGAAGATTTAGCCAGACACAGTATCAGCCATACAGCGGAAAAACCGTTTCAATGTGAAGTATGCAAAAAAGCATTTGCTGTAAAATCATCGTTAAAAATCCACTCAAATACGCACAAAAAAGAGCCTCCATGTAGTTGCGAGCAATGCGGTCGCGCGTTTATACGCAGGGATTGCCTCATGAGGCACATGAGATCAAAACACAAAGAGGTGTTAGAAGATATAATGGCCAATGCGGAAAAGAAAAAGTTGCAAGAACATTTGTTGAAAATTGCGTCAGACGGGATGACCGATAATGTCATAAAAGACTCAGTAATATGGAATGAGTTAACTTTGACTGAAAGTATAAAAGAACTGTTAACTTTATTAGTTGATGAGGAATGTTTAACAGAATTTGGACACCCGCAATCTCCAGTCGATAAAGTTTTAGATTTGGTAATTGAACGATGTGGACATAGACCAGCATCTGAGGAAGATTTTGATGATTATATTGGTAGAATGAGGGAAAATGCAAAGTTATTGTTTACTGTAGTTATTGATGATGATGCTGTAAAAGAGTTGTTAAATAACCAAACTATTGACGAAGTTATTGTGCATGTTCTTAATTTAGCTAGAAAACAAAAATCTGTAGAGTctgttgaaaaataa
- Protein Sequence
- MEEGKIKEELEIKTEAFIEEEVVEEQVFENVEEEIYEETEEQIEGEVIHYQVEERSNGVELEEVDEDGRKIHTLVLQNVEIADDQEVQESTVIENYVVHNSDGNLQIDTVEDNIIHTYIIENVEYEEEEQEVQEDEDQEMEEGEEMEEGDEMEEGDEMYEEQEMDEQEMAGNQVVQIINDFSEDTLDTTNSQQETQNKSHETYADEYVDDPQMVKVVTKREVHECDSCFKSFQTSTGLKRHIAVTHGEQNKDEDPLTFQLCPCCGEPSDSGHNVGEFRCDVCDKKFIQKKSLGRHVSIEHPENDKYICSECKKDFKSKEELIAHMRVHPITTFKCMGCEREFTRKYHLERHMLQAGCMGVTQKVFKCNVCAKCFTRKDNLAEHLRGHIGNQKPKTIFKCDFCPKMFKGLPLLNIHLRTHTGERPYPCDFCEKRFPSSGAMMKHRRMHTGEKPYKCQVCGNCFAAKETLNRHVRTHTGEKPHSCNFCGKSFIQAAQLRAHIFHHTGENAYVCPHCNKAFNRKLRLTTHMKFLHEGAKPLECKVCQKPFFRKEDLARHSISHTAEKPFQCEVCKKAFAVKSSLKIHSNTHKKEPPCSCEQCGRAFIRRDCLMRHMRSKHKEVLEDIMANAEKKKLQEHLLKIASDGMTDNVIKDSVIWNELTLTESIKELLTLLVDEECLTEFGHPQSPVDKVLDLVIERCGHRPASEEDFDDYIGRMRENAKLLFTVVIDDDAVKELLNNQTIDEVIVHVLNLARKQKSVESVEK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -