Bgla017451.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Brachypterus glaber
Gene Symbol
-
Assembly
GCA_958510825.1
Location
OY294048.1:7521621-7527807[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 25 0.00082 0.046 15.1 5.6 1 23 252 274 252 274 0.98
2 25 0.012 0.7 11.4 5.8 1 23 280 302 280 302 0.96
3 25 0.00031 0.018 16.4 1.0 1 23 308 330 308 330 0.99
4 25 0.079 4.5 8.8 0.8 1 20 336 355 336 357 0.89
5 25 0.22 12 7.5 1.5 2 14 493 505 492 511 0.86
6 25 0.00079 0.045 15.1 6.0 1 23 518 540 518 540 0.99
7 25 0.13 7.6 8.1 2.4 1 23 546 568 546 568 0.94
8 25 0.0005 0.028 15.8 1.4 1 23 574 596 574 596 0.99
9 25 0.13 7.6 8.1 1.1 1 10 602 611 602 621 0.84
10 25 0.0031 0.17 13.3 5.3 2 23 752 773 751 773 0.97
11 25 0.0001 0.0059 17.9 1.8 1 23 779 801 779 801 0.99
12 25 0.0051 0.29 12.6 0.6 1 23 807 829 807 829 0.99
13 25 0.00035 0.02 16.3 0.6 2 23 915 937 914 937 0.96
14 25 0.017 0.96 11.0 3.9 1 23 947 969 947 969 0.98
15 25 0.00018 0.01 17.2 2.8 1 23 975 997 975 997 0.99
16 25 0.0047 0.27 12.7 5.8 1 23 1007 1029 1007 1029 0.98
17 25 0.0005 0.028 15.8 5.5 1 23 1035 1057 1035 1057 0.99
18 25 0.056 3.2 9.3 0.3 1 20 1063 1082 1063 1084 0.95
19 25 2.2e-05 0.0012 20.1 3.2 1 23 1206 1228 1206 1228 0.99
20 25 0.00063 0.036 15.5 1.1 1 23 1234 1256 1234 1256 0.98
21 25 0.0014 0.08 14.4 3.0 1 23 1262 1284 1262 1284 0.98
22 25 1.4e-05 0.00077 20.7 1.3 1 23 1290 1312 1290 1312 0.97
23 25 5e-05 0.0028 18.9 0.4 1 23 1318 1340 1318 1340 0.99
24 25 0.035 2 9.9 4.3 1 23 1346 1368 1346 1368 0.97
25 25 0.21 12 7.5 0.2 2 22 1374 1394 1373 1394 0.94

Sequence Information

Coding Sequence
ATGGCATTTTACATTGGAAACAATAGCTTAAACATTCaagattttgatttaatttgTAGAATTTGTCTAGCTAAACAAGAGAAGTGTTATCTGCAACATTTTAAGGAAATTAACGAAATCAATATATtagatttattaataaaacatttggaTATTCAAataaatgctAATGATTTGCTACCAAAGCACATTTGCAAAGAGTGCGCCAATTTTATCttcaaaatttacaattttgctcatctttgtaaaaaaaatcaatacgaTTTACATCAGGTATTAATAAATTCAACAGAAACACAAAAGGATAGTAATCCTAATGTTCAAgtcaaaattgaaaataaaaattacaatgtaAATGAAAGTCAAATCAAGGAAATTGAATCTCTGAATCGTAAAACAACAGATAACTTaaaccctGCTGAGATTTGTCCAGAAATCCAAAAACCAATAAATTGTGAAGtggattatataaaaattaagcttGATGAAAATTATGATCAGGATGTTTTAAATTCTGATCtagatattataaatataatagattatgaaaatattaaacatgAAATCAGTGATAATTTTATGACTGTTGATACTGAATTAAACATTGAACAATATTCGGATCTTCAAGCAGGCAATCAAGTTGACAATAATACGActgtgaataaaaataatatagagcGAGGTGAGTGCTCTTATGTCTCAAATATATTTACGCCTGAAAGAGAGTGCATTAAGGTTACTGAAGAAAAAAGATTCCAATGCCCATactgtccaaaaagttttactcAAATCCACAATTGCAGATctcatataaataaacatttagggTTAAGACCTTTTAAATGCAGTTATTGCGATAAGAGCTTTATCCATAAAAGCGTTCTTGATTGTCATATCAAATCTCATACtggcgaaaaaaaatataaatgcttattatGCGATTACAGTGCAATTGTCAAGTCTACTTTAAAGAGACACATGAATAAACATCTTAATGAGATACCGTATCAATGCCCTTATTGTTATAAAAGGTTTCAGTTAGCCTCATGTTTAGATGGCCATATTGGAACGTGCGATGAACCTGAAGAAACGAATAAGGCTACCTATGAAATAGATAGTGATTTGGAGGAAGAATTATTCAAGTTTGATGTTAGCACAATAACACCAAATGAATTGGAACATAACGTTATCACAAATGATGAAAAACACGAGAATATTCTTATTCAAGTAGGAAGTGAACCAAATGTTTCTAAATTGAATAATATTACAATAGAAAAGGAACGGTTAAAAAGTGCTAATTATATATCCGGTTTTTTGAATTGTGATCAAGATGATATTGATAATGCTCAACTTTGTAGTGAATTAGATAATCAGAAAAATCCTGACCTTCAAGTAGATAATGAGTTGGTTCAAATTGAACCTGAAGTTGGTGATGCagttgtgaataaaaaaaataagaaggcTCATGAGAAGCTTGTCTGCTCCTATTGCCCAAAAACATTTTCATCTAGAAACGAATGCGAAGGCCACAAGGTTACTAAAGCGAAAAAATACAAATGCCCATACTGTCCAAAAACTTTCACCCAAGTCCACAATTGTAGATCTCATATAAATAAGCATTTAGGACTAAGACCTTATAAATGCAGTTATTGTAATATGAGTTTCGGACAGAGGGGTGTACTTGATTGCCATATCAAATCACATACTGGAGAAAAGAGATATAAATGCTATTTATGCGATTATAGGGCCATTGTCAGATCTACTTTGAAAAGGCACATGAATACACATCTTAATGAGACACCCTATCAATGCCCATATTGTGATAAAAGGTTTTTATGCACCGGTTTGGATGACCATATTGGAATTTGTGATGGATCAAAAGAAATAAATCTAAATACCTACGAAATAGATAGTGATTTAGAGGAAGAATTATTAAAATACGATGATGATGTGAAAACAATAAATGAATTAGGAGGAAACAAAGTTGATGCAAGTAcagataatataaaatataaagttgatCAGCTAATTTTAACAGAAAATGTACCATCCGTTTCTAAATTCAAGAAAAATGTGGGAAAAACAATTCAGCCATGGCCAGCAGATCATTTTacaaatgaaaatttcaagaataaaaccaataaaacaaaaggctCTGTTAAAAGATACACATGTTCGCATTGTCTAAAACCTTTTCGGAACAAACTAAAATGTTGTTTGCATGAATATGAAAATCATGGTGTTCATAGGCTTAAATGTCCGCAGTGTTCAAAAAGATTTACCCAAATGCACAATTGGAAACACCATGTGCTTAGGCATTTAGGATCGTATCCATTTAAATGTTCACTTTGCAATAAAGCCTTCGTGTGTAACAGTGAACTAACGGCCCATATGAAAATCCACACTAaagaaaagaaatataaatgtaCTATTTGTAGTTATGACTCTTTTGACCAAAATGCGTTAGCAAGTCACATGAATAAACATCTTAGTGAAGCACCAAAAGAAACTAACATTGAGGACAATATTATCAATAAACCAATGGAAATAGGTCCGTTGGAAATTGAAGATGTGAACATTAAATATGAAAACGATTTGGAAAGTAACTTGAATGATTCCGATGTTAATTTTAAGGAATATTCCAATGTAGAGTATTCGTCAGATGTATACCCTAATGATTTGGAAGATTTCCCGGATTTAATTAACATTAGTGACATGGATCAAGATCAAACTAAATCAAGCAAATGCCCACAATGCGACAAAGAATTCGGAGATAATCATTTATTAGATTATCATATGCGAGAAGTGCACTCATATGAACCaggaaatgaaaataattttccttGCTCTAATTGttctaaaacttttaaatctACGTCAGATCATTTAAAACATGCACGAACGCACAATGACGCAAAAGAATATGAATGTAAATACTGTTTCAAAATTTTCACTCAAGTTTATGACTACAAAACTCATATCAACAGGCATATTAACAGTCAATTAAAGTTGAACTCGTTTGTATGCTCGTATTGTAATACAAGTTTTGAACATAGACATGAAATGAAACTTCATGAAAAGACTCATACAGGAGAAAAAGAGTTTAAGTGTCAAAAATGCAGTTATAGTTGCATTACTAAGTATTTATTAAGAAGGCACATAAGCACACATCTTAAAGATACACCCTATCAATGCCCTTATTGCTATAAAAAAATGAAGTCATCCACTCAATTGGACGATCATATTGGAATGTGCGATGGATCACAAAAATTGAATCAGGATACCTGTGAATCTAATAGTGATATAGATGATTTGTTAGCCAATTACCTGCAAATAATGGAAACTGATAATATTGAAGATGCCGAAAATGAAATGGAAACTAATATTCAAGATGATAATTTAGAATATAATGAAGTTGATAGCATAGACACAGATATAAAAAGTGAAGAAAACgcgaataaaataaacattacagAAATAAGCATTAAAACAGAACTGTGTAATATGGCAGATGTAGACAATGACATTCAAAGACAAGAAGAAGAATTTAAAATCGATTCAAAAGAGGCTGCCTTTGAAAATATAAATCTTCCAGTGTTAAATATACAAAAACGGTATGTTTGTTCTTACTGTAATAATTCGTTTGCACACAGAACTACATTAAATAACCATATACGTACACATACGGGCGAAAAACCTTATGAATGTCTTGAATGTGGCAAGAGATTTCTCACACAAGGCAATTTTACAGTGCATAAACAGCGTCATTCGGGTATAAAACAGTATGCTTGTAAACATTGCGATAAAACATTTTGGACAAACTCTGAATCTAAGATACATATGCGAACCCATACTGGAGAAAAACTGTACGCTTGTACGTACTGCCCTAAAACATACACTcaattaaataacttaaaaagccATCTTAACAACCATCTTGGGGTTAAACCTTACGTATGTTCGGTTTGTAATAAAGGTTTTACTATAATGGACTCGCTTAGCCGTCATATAAAAACGCATACTAACGATAAAAGACATTCGTGCTCCTTATGCGAATACAAATGCATCGCAAAAAGCACGTTAAGAAGGCACATGGGAACAcatcaaaaaaagaaattgcaaTGCTCATCTTGCGGATTAAAGTATAAAGATACGGCTAGCTTAGACATACATACCAAAACTTGTAACACATTCCAAAATACTTGA
Protein Sequence
MAFYIGNNSLNIQDFDLICRICLAKQEKCYLQHFKEINEINILDLLIKHLDIQINANDLLPKHICKECANFIFKIYNFAHLCKKNQYDLHQVLINSTETQKDSNPNVQVKIENKNYNVNESQIKEIESLNRKTTDNLNPAEICPEIQKPINCEVDYIKIKLDENYDQDVLNSDLDIINIIDYENIKHEISDNFMTVDTELNIEQYSDLQAGNQVDNNTTVNKNNIERGECSYVSNIFTPERECIKVTEEKRFQCPYCPKSFTQIHNCRSHINKHLGLRPFKCSYCDKSFIHKSVLDCHIKSHTGEKKYKCLLCDYSAIVKSTLKRHMNKHLNEIPYQCPYCYKRFQLASCLDGHIGTCDEPEETNKATYEIDSDLEEELFKFDVSTITPNELEHNVITNDEKHENILIQVGSEPNVSKLNNITIEKERLKSANYISGFLNCDQDDIDNAQLCSELDNQKNPDLQVDNELVQIEPEVGDAVVNKKNKKAHEKLVCSYCPKTFSSRNECEGHKVTKAKKYKCPYCPKTFTQVHNCRSHINKHLGLRPYKCSYCNMSFGQRGVLDCHIKSHTGEKRYKCYLCDYRAIVRSTLKRHMNTHLNETPYQCPYCDKRFLCTGLDDHIGICDGSKEINLNTYEIDSDLEEELLKYDDDVKTINELGGNKVDASTDNIKYKVDQLILTENVPSVSKFKKNVGKTIQPWPADHFTNENFKNKTNKTKGSVKRYTCSHCLKPFRNKLKCCLHEYENHGVHRLKCPQCSKRFTQMHNWKHHVLRHLGSYPFKCSLCNKAFVCNSELTAHMKIHTKEKKYKCTICSYDSFDQNALASHMNKHLSEAPKETNIEDNIINKPMEIGPLEIEDVNIKYENDLESNLNDSDVNFKEYSNVEYSSDVYPNDLEDFPDLINISDMDQDQTKSSKCPQCDKEFGDNHLLDYHMREVHSYEPGNENNFPCSNCSKTFKSTSDHLKHARTHNDAKEYECKYCFKIFTQVYDYKTHINRHINSQLKLNSFVCSYCNTSFEHRHEMKLHEKTHTGEKEFKCQKCSYSCITKYLLRRHISTHLKDTPYQCPYCYKKMKSSTQLDDHIGMCDGSQKLNQDTCESNSDIDDLLANYLQIMETDNIEDAENEMETNIQDDNLEYNEVDSIDTDIKSEENANKINITEISIKTELCNMADVDNDIQRQEEEFKIDSKEAAFENINLPVLNIQKRYVCSYCNNSFAHRTTLNNHIRTHTGEKPYECLECGKRFLTQGNFTVHKQRHSGIKQYACKHCDKTFWTNSESKIHMRTHTGEKLYACTYCPKTYTQLNNLKSHLNNHLGVKPYVCSVCNKGFTIMDSLSRHIKTHTNDKRHSCSLCEYKCIAKSTLRRHMGTHQKKKLQCSSCGLKYKDTASLDIHTKTCNTFQNT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-