Basic Information

Insect: Brachypterus glaber
Gene Symbol: -
Assembly: GCA_958510825.1
Location: OY294053.1:994771-1020749[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.0012 0.069 14.6 1.7 1 23 166 188 166 188 0.98

2 17 7.9e-05 0.0045 18.3 0.8 1 23 459 481 459 481 0.98

3 17 1.3e-05 0.00073 20.8 1.3 1 23 487 509 487 509 0.99

4 17 0.00011 0.0065 17.8 1.8 1 23 515 537 515 537 0.98

5 17 0.00041 0.023 16.0 4.8 1 23 543 565 543 565 0.96

6 17 6.1e-05 0.0035 18.6 1.3 1 23 571 593 571 593 0.98

7 17 1e-07 5.7e-06 27.4 3.0 1 23 599 621 599 621 0.99

8 17 0.00027 0.015 16.6 1.9 1 23 724 746 724 746 0.98

9 17 1.3e-05 0.00073 20.8 1.3 1 23 752 774 752 774 0.99

10 17 8.1e-05 0.0046 18.3 1.1 1 23 780 802 780 802 0.98

11 17 0.0007 0.04 15.3 6.0 1 23 808 830 808 830 0.98

12 17 0.00055 0.031 15.6 5.0 1 23 836 858 836 858 0.99

13 17 9.6e-06 0.00054 21.2 5.2 1 23 864 886 864 886 0.98

14 17 7.1e-07 4e-05 24.7 3.2 1 23 892 914 892 914 0.98

15 17 6.2e-05 0.0035 18.6 1.8 1 23 920 942 920 942 0.98

16 17 0.00066 0.037 15.4 8.1 1 23 948 970 948 970 0.98

17 17 3.7e-05 0.0021 19.3 0.6 1 20 976 995 976 997 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.0012	0.069	14.6	1.7	1	23	166	188	166	188	0.98
2	17	7.9e-05	0.0045	18.3	0.8	1	23	459	481	459	481	0.98
3	17	1.3e-05	0.00073	20.8	1.3	1	23	487	509	487	509	0.99
4	17	0.00011	0.0065	17.8	1.8	1	23	515	537	515	537	0.98
5	17	0.00041	0.023	16.0	4.8	1	23	543	565	543	565	0.96
6	17	6.1e-05	0.0035	18.6	1.3	1	23	571	593	571	593	0.98
7	17	1e-07	5.7e-06	27.4	3.0	1	23	599	621	599	621	0.99
8	17	0.00027	0.015	16.6	1.9	1	23	724	746	724	746	0.98
9	17	1.3e-05	0.00073	20.8	1.3	1	23	752	774	752	774	0.99
10	17	8.1e-05	0.0046	18.3	1.1	1	23	780	802	780	802	0.98
11	17	0.0007	0.04	15.3	6.0	1	23	808	830	808	830	0.98
12	17	0.00055	0.031	15.6	5.0	1	23	836	858	836	858	0.99
13	17	9.6e-06	0.00054	21.2	5.2	1	23	864	886	864	886	0.98
14	17	7.1e-07	4e-05	24.7	3.2	1	23	892	914	892	914	0.98
15	17	6.2e-05	0.0035	18.6	1.8	1	23	920	942	920	942	0.98
16	17	0.00066	0.037	15.4	8.1	1	23	948	970	948	970	0.98
17	17	3.7e-05	0.0021	19.3	0.6	1	20	976	995	976	997	0.94

Sequence Information

Coding Sequence: ATGGAggatataaaaattaagatagAAGAGAATGAATTTGAAGATGGAGTTACTGAAACAGATATTGAATATAAAAACCACCTAGAATTTACTAAGGAAGAAGAGGAAATCAAAATTGACATCGTGAAGCATGAAATTTTTGCTGATGaatgtattaaaaaagaaattattgagGAAGAACCAGTAGAAGATAATTCAAGACAGATTCaagaagaaagtgCTCAAAAAAATCATATAGTTTGTATTCGTTCTATTCAAACTGCTACTATTATGGaagatataaaaattaagatagAAAAGATTGAATTTGATGATGAAGGTGGAGAAATTCATATTGAAGATAAAAATCAAGAAGTATTTATTAAGGAAGAAGAGGAAATCAAAATTGAATTGGAGGAGCATGCCATTTTTACTGATGAATATATTGAAACGGAAATTAAGAAGGAAGAACCTGGAGAAGACGATTTAAGGCAGATGCAAGAAAGCGAAAATCCTTATACATGTACCCAATGTAATATGGATTTTACACATGGTGCTACTTTAAGAAATCATCTTCAAATACACACAGGAGAAAATTCccataaatgtatttattgtgAAAAGataGAAAAGATTGAATTTGACGTGGAAGTGGGAGAAATTCATATTGAAGATAAAAATCAAGAAGTATTTATTAAGGAAGAAGGGGAAATCAAAATTGAATTAGAGgagcatgaaatttttactgatgaatatattaaaaaagaaatgaaGGAGGAAGAACCTGGAGAAGATGCTTCAAGGCAGATGCAAGAAAGGGAAAAACCCTATAAATgtacTTGTAAAAATCATACAGTTGGTATTATTTCTATTCAAACTGCTACTAACATGGaagatattaaaattaagataGAAAAGATTGAATTTGATGATGAAGGTGGACAAATTTATATTGAAGATAAAAATCAAGAAGAATTTATTAAGGAAGAAGAGGAAATCAAAATTGAATCAGAGGAGCATGCAATTTTTACTGATGAATATATTGAAACAGAAATTAAGGAGGAAGAACCTGGAGAAGATGCTTCAAGGCAGATGCAAGAAAGCGAAAAACCCCATAAATgtacTTGTAAAAATCATACAGTTGGTATTATTTCTATTCAAACTGCTACTAACATGGaagatataaaaattaagatagAAAAGATTGAATTTGATGATGAAGGTGGAGAAATTTATTTTGAAGATAAAAATGAAGAATTTATTAAGGAAGAAgaggaaataaaaattgaaattgaagagcatgaaatttttactcatgaatatattaaaaaagaaattaaggaGGAAGAACCTGGAGCAGATGCTTCAAGGCAGATGCAAGAAAAGGAAAAACCCTATAAATGTATAGAatgtaaaaaagctttttcacgTGCCAATACTTTAAAAGATCATCTTCGAATACACACAGGGGAGAAGCCCTATAAATGTACCCAATGTGAAATAACTTTTACATTTGCTGCTACTTTAAGAAATCATCTTCGAACACACACAGGAGAGAAGCCGCATAAATGTTCCCAATGTGAAAAAGCTTTTTCAATGGCTAATACTTTAAAAAACCATGTTCGAATACACACAGGAGAAAAGCCCCATAAATGTATTCATTGCGAGAAAGTCTTTTCGCgattatcatatttaaaaactcataTTCTCACGCACACTGGGGAGAAGCCCCATAAATGTTCCCAATGCGAAAAAGCTTTTATATATGCAGTTAGTTTAAAAAGTCATCTTCGAATACACACAGGAGAGAAGCCCTATAAATGTACTCATTGCGAGAAAGTCTTCTCACAATCATCAAATTTAAAAGACCATATTCTCACGCACACTGGGGAGAAGCCCCATAAATGTACACAATgtacTTGTAAAAATCATACAGTTGGTATTATTTCTATTCAAACTGCTACTAACATGGaagatataaaaattaagatagAAAAGATTGAATTTGATGATGAAGGTGGAGAAATTTATTTTGAAGATAAAAATGAAGAATTTATTAAGGAAGAAgaggaaataaaaattgaaattgaagagcatgaaatttttactcatgaatatattaaaaaagaaattaaggaGGAAGAACCTGGAGAAGATGCTTCAAGGCAGATGCAAGAAAAGGAAAAACCCTATAAATGTATAGAatgtaaaaaagctttttcacaTGCCAATACTTTAAAAGATCATCTTCGAATACACACAGGGGAGAAGCCCTATAAATGTACCCAATGTGAAATAACTTTTACATTTGCTGCTACTTTAAGAAATCATCTTCGAACACACACAGGAGAGAAGCCGCATAAATGTTCCCAATGTGAAAAAGCTTTTTCAATGGCTAATGCTTTAAAAAACCATGTTCGAATACACACAGGAGAAAAGCCCCATAAATGTACACAATGTACAAAATGTTTTTCACAAGCTATAACTTTAAAAGAACATATTTTCACACACACTGGGGAGAGGCCCTACAAATGTACACAATGTAAAAAATCCTTTTCTTATATTTCAGCATTAAAATGTCATATTCGAACGCACACAGGGGAGAAGCCTCATAAATGCACACATTGTGAAAAAGCCTTTTCACAATCATCAAGTTTAAGATATCATATTCTCACGCACACTGCGAAGAAGCCCCATAAATGTACATATTGTGAAAAATCTTTTTCGCAAAATTCAGCATTAAAAAGTCATATTCTCACGCACACTGGGGAGAAGCCCCATAAATGTTCCCAATGCGAAAAAGCTTTTATATATGCAACTAGTTTAAGAAGTCATCTTCGAATACACACAGGAGAGAAGCCCCATAAATGTACTCATTGCGAGAAAGTCTTTTCACAATCATcacatttaaaatttcatattctCACGCACTCTGGGGAAAAGCCCCATAAATGTACACAATGTAAAAAATCCTTTCCACGAGCTTCATCTTTAAAAATTCATGTGCTCATAAAAATCATACAGTTGGTATTATTTCTATCTCAAACTGCTACTAACATGGaagatataaaaattaagatagAAAAGATTGAATTTGATGATGAAGGTGAAGAAATTCATATTGAAGATAAAAATCAAGAAGAATTTATTAAGGAAGAAGAGGAAATCAAACTTGAATTAGAGGAGCATGCAATTTTTACTGATGAATATATTGAAACAGAAATTAAGGAGGAAGAACCTGGAGAAGATGATTCAAGAAAGACGCAagaaaatataaaaattaagatagAAGAGAATGAATTTGGAGATGAAGTTAAAGAAACTCATATTGAAGATAGAAAACAAGAAGAATTTATTAAGGAAGAAGAGGAAgtcaaaattgaaattttcgAGCATAACATTGTTGCTgatgaatatattaaaaaagaaattaaggaGGAAGAACCTGGAGAAGACGACTCAAGGCAGATGCAAGAACataCAACCGTAGTCCAAAATATTAGTCCGAAAGTTAACACGCACAGCTTAAAAGTTAATATGCACAGTCCCAAAGTTGAGAAGTACAGTACAAAATTTTACACGCAAAATTTCTACTAA
Protein Sequence: MEDIKIKIEENEFEDGVTETDIEYKNHLEFTKEEEEIKIDIVKHEIFADECIKKEIIEEEPVEDNSRQIQEESAQKNHIVCIRSIQTATIMEDIKIKIEKIEFDDEGGEIHIEDKNQEVFIKEEEEIKIELEEHAIFTDEYIETEIKKEEPGEDDLRQMQESENPYTCTQCNMDFTHGATLRNHLQIHTGENSHKCIYCEKIEKIEFDVEVGEIHIEDKNQEVFIKEEGEIKIELEEHEIFTDEYIKKEMKEEEPGEDASRQMQEREKPYKCTCKNHTVGIISIQTATNMEDIKIKIEKIEFDDEGGQIYIEDKNQEEFIKEEEEIKIESEEHAIFTDEYIETEIKEEEPGEDASRQMQESEKPHKCTCKNHTVGIISIQTATNMEDIKIKIEKIEFDDEGGEIYFEDKNEEFIKEEEEIKIEIEEHEIFTHEYIKKEIKEEEPGADASRQMQEKEKPYKCIECKKAFSRANTLKDHLRIHTGEKPYKCTQCEITFTFAATLRNHLRTHTGEKPHKCSQCEKAFSMANTLKNHVRIHTGEKPHKCIHCEKVFSRLSYLKTHILTHTGEKPHKCSQCEKAFIYAVSLKSHLRIHTGEKPYKCTHCEKVFSQSSNLKDHILTHTGEKPHKCTQCTCKNHTVGIISIQTATNMEDIKIKIEKIEFDDEGGEIYFEDKNEEFIKEEEEIKIEIEEHEIFTHEYIKKEIKEEEPGEDASRQMQEKEKPYKCIECKKAFSHANTLKDHLRIHTGEKPYKCTQCEITFTFAATLRNHLRTHTGEKPHKCSQCEKAFSMANALKNHVRIHTGEKPHKCTQCTKCFSQAITLKEHIFTHTGERPYKCTQCKKSFSYISALKCHIRTHTGEKPHKCTHCEKAFSQSSSLRYHILTHTAKKPHKCTYCEKSFSQNSALKSHILTHTGEKPHKCSQCEKAFIYATSLRSHLRIHTGEKPHKCTHCEKVFSQSSHLKFHILTHSGEKPHKCTQCKKSFPRASSLKIHVLIKIIQLVLFLSQTATNMEDIKIKIEKIEFDDEGEEIHIEDKNQEEFIKEEEEIKLELEEHAIFTDEYIETEIKEEEPGEDDSRKTQENIKIKIEENEFGDEVKETHIEDRKQEEFIKEEEEVKIEIFEHNIVADEYIKKEIKEEEPGEDDSRQMQEHTTVVQNISPKVNTHSLKVNMHSPKVEKYSTKFYTQNFY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -