Basic Information

Insect: Brachypterus glaber
Gene Symbol: -
Assembly: GCA_958510825.1
Location: OY294047.1:29322128-29325367[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 28 0.00019 0.011 17.1 0.3 1 20 159 178 159 181 0.93

2 28 0.14 7.7 8.1 8.0 1 23 187 210 187 210 0.96

3 28 1.3 73 5.0 0.3 3 23 218 237 217 237 0.82

4 28 0.0022 0.13 13.7 1.0 1 23 244 267 244 267 0.92

5 28 0.0021 0.12 13.8 2.3 2 23 273 294 273 294 0.95

6 28 0.00021 0.012 17.0 0.9 1 23 299 322 299 322 0.97

7 28 0.64 36 6.0 1.8 1 23 330 352 330 352 0.96

8 28 0.0017 0.097 14.1 0.4 2 23 359 381 358 381 0.94

9 28 0.035 2 9.9 1.4 1 21 387 407 387 408 0.95

10 28 0.011 0.63 11.5 0.2 1 23 429 452 429 452 0.96

11 28 0.0024 0.14 13.6 2.3 1 23 458 480 458 480 0.97

12 28 0.00041 0.023 16.1 0.4 1 23 525 547 525 547 0.98

13 28 1.1 64 5.2 1.2 1 23 552 574 552 574 0.77

14 28 0.00045 0.026 15.9 0.9 1 23 579 601 579 601 0.98

15 28 1 59 5.3 0.1 1 9 606 614 606 623 0.79

16 28 0.19 11 7.7 0.2 1 16 632 647 632 648 0.90

17 28 0.00055 0.031 15.6 0.9 1 23 655 677 655 677 0.97

18 28 7.4e-06 0.00042 21.5 1.1 1 23 721 743 721 743 0.98

19 28 0.0013 0.075 14.4 0.5 1 23 756 778 756 778 0.97

20 28 0.027 1.5 10.3 5.8 1 23 800 822 800 822 0.98

21 28 0.0038 0.22 13.0 2.1 2 23 825 846 824 846 0.97

22 28 8e-06 0.00045 21.4 3.3 1 23 854 876 854 876 0.98

23 28 0.014 0.81 11.2 0.4 2 23 884 905 883 905 0.95

24 28 7.2e-05 0.0041 18.4 0.8 1 23 911 933 911 933 0.96

25 28 0.00043 0.024 16.0 2.1 1 23 938 960 938 960 0.98

26 28 0.015 0.85 11.1 1.6 1 23 982 1004 982 1004 0.98

27 28 0.0025 0.14 13.6 0.8 1 23 1008 1032 1008 1032 0.98

28 28 0.016 0.88 11.1 0.1 3 23 1050 1070 1048 1070 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	28	0.00019	0.011	17.1	0.3	1	20	159	178	159	181	0.93
2	28	0.14	7.7	8.1	8.0	1	23	187	210	187	210	0.96
3	28	1.3	73	5.0	0.3	3	23	218	237	217	237	0.82
4	28	0.0022	0.13	13.7	1.0	1	23	244	267	244	267	0.92
5	28	0.0021	0.12	13.8	2.3	2	23	273	294	273	294	0.95
6	28	0.00021	0.012	17.0	0.9	1	23	299	322	299	322	0.97
7	28	0.64	36	6.0	1.8	1	23	330	352	330	352	0.96
8	28	0.0017	0.097	14.1	0.4	2	23	359	381	358	381	0.94
9	28	0.035	2	9.9	1.4	1	21	387	407	387	408	0.95
10	28	0.011	0.63	11.5	0.2	1	23	429	452	429	452	0.96
11	28	0.0024	0.14	13.6	2.3	1	23	458	480	458	480	0.97
12	28	0.00041	0.023	16.1	0.4	1	23	525	547	525	547	0.98
13	28	1.1	64	5.2	1.2	1	23	552	574	552	574	0.77
14	28	0.00045	0.026	15.9	0.9	1	23	579	601	579	601	0.98
15	28	1	59	5.3	0.1	1	9	606	614	606	623	0.79
16	28	0.19	11	7.7	0.2	1	16	632	647	632	648	0.90
17	28	0.00055	0.031	15.6	0.9	1	23	655	677	655	677	0.97
18	28	7.4e-06	0.00042	21.5	1.1	1	23	721	743	721	743	0.98
19	28	0.0013	0.075	14.4	0.5	1	23	756	778	756	778	0.97
20	28	0.027	1.5	10.3	5.8	1	23	800	822	800	822	0.98
21	28	0.0038	0.22	13.0	2.1	2	23	825	846	824	846	0.97
22	28	8e-06	0.00045	21.4	3.3	1	23	854	876	854	876	0.98
23	28	0.014	0.81	11.2	0.4	2	23	884	905	883	905	0.95
24	28	7.2e-05	0.0041	18.4	0.8	1	23	911	933	911	933	0.96
25	28	0.00043	0.024	16.0	2.1	1	23	938	960	938	960	0.98
26	28	0.015	0.85	11.1	1.6	1	23	982	1004	982	1004	0.98
27	28	0.0025	0.14	13.6	0.8	1	23	1008	1032	1008	1032	0.98
28	28	0.016	0.88	11.1	0.1	3	23	1050	1070	1048	1070	0.96

Sequence Information

Coding Sequence: ATGGAGTGTATAGAAATTTTTGACAGCGATGAAGATATGGAAACCGAAAAATTAAACGAGAAGAAACAAGTTTTAATCGAAAATCCAGAAAAAGAACAAAACTTCAGAGATAAGGTAACTTTAAGCGCGTTTCCTCTCAAGGAAATtgaaaagggaaaaatagaTATAGACAGAGGAAATTTAAATGTGGACATTAAAAACAGTGATGAAGAAATTAAAATTGCGGAAGCGTCTAACTTTTCCGACTTGATTCCAAAGAGTTATTTCAAAGATGATATAGAAAAAATCAAAGActttttattagattttgaGATAGAAGACCACGAAAATGAATTTGAGAAAGTTAACGAAAATACTGTAAACgcagaaataaataaacaatccGACGAGTCGGATTGTGAAAAAGCAAAGAACAATGAAGATAGTGATGGAAACCATACAAGTGACGAAACTAATTTAGCAGATCGTGTGTATTATGAATGTTCATTTTGCGGAAAGACGTTCATAAAATCGGCCGACTTGGACAAACATATTCCTTCACACACTGGAAAAAAGGCATATAATTGCATGTTTTGCAAAAAAGCCTATACCAAGAGAGAACATTTAACATACCATCAAAAACACAAACATGTTACAACTGCCCGAAGACCATGTACGTTCTGTGGAAGTTTTATTCAAAgagaaacattaaataaacacatTCTCGATCATTTCAAAAGTCAGCCATCATTCGAGTGCAAATTATGTAGAAAAAAGTACGacaatgaaaataatttaataaaacatgtAAGTGCCAAGCACAATAATATCCGAAACACTTGCAAAGTGTGCAACAAAGAATTTAATAGTCAAAAATTATTGTTCCAACATAAGTCGGAGCATTGGAGGAGTATATATACATGTTCAGTTTGCAATAAAAcattttctaataaattattaattatgaaACATGTAAATAGTGAGCATGATAATCTACCTAAAGAACCATACATGTGTGGAATCTGCCTTCAAAAATTTTCTGAATGTAACGAACTCGTGCTGCACAAATTTTCTCATACAGAATCATCAAAGCTTGTCTGCAGTCATTGTAAACTCATATTTAGTACTGAGTCAGCTTTAAATGGTCATATTCAAGCCAAGCATCTTGGAAAGGCTCAACACAAGTGCACAAATTGCTTCAAAGTATTTAGTTTGGACATATGGCTGAAAAGGCACCTTAACTTTTTTTGCAAAGGAAAATCTGTTTATAAATCTACGTCCAAAGCTGATTTAGTTTTTCTTAGTCATGTTTGTCCTGGCTGTAAACAATCTTTTCAAATTGAAGAGGATTTAGATGTTCATATACGACAGAACCACGTCGGGGAATTACTATACAAATGCGAAAAATGTGATGTATGTTTTACCTTAGGTAGAGCTTTGAAGAGGCACATTCTATTTCATACCGAGGAAAATAATACACTTTTCCCGAACGAAAAGTTAAATACAATTAAAACGAATTCTCCGCATTCTAAAGAAACAATTAACAATATGTTTGTGCCTGAAAATAATCAAACCCATGTTCGCGAAGAGCTGTTTTCCTGCCCAGTATGCCTGGAAAAGTTTTCGACAAAAGAGCAGATAACAGAACACATTCAAAAGCATAATTCTGGTACATATACGTGTAAAATTTGTGATATAAGGTTCCAATTCGATAAAACATCTTTAAATCATGTTAAAATGCACATAACAAACACTTTCGAGTGTAGATTCTGTGAAAAATCTTTTGGTGATAAGATTTTGTTTCAGACTCATATGTTAATTCATAACGAGACACTTTATGAGTGTTCACATTGTGGAAAAAAGTGGGCCAATGAAAATGCTTTGAAGACTAGGTTAAGAGGCAATACCAAAGATTTTGCTTGTACtaattgtgataaaaagtttgCAGAAAAGTCTGGATTAGGAACTAATTTAGAAGATATGTTTTCTTGTCGCATTTGCAAGGTTACCTTCGGAAGCAAAGGTGGTCTAAATAAACATATGTATAATCATAACAGTAATAGTCCATTGGCATGCCATCAATGCATGAGACTTTTCGAAGATCTAAGATGTTTGAATAGACATAATATTAAGTTTCACAACTTTAAAAAACCTATACAGAAAAATGCCAAAGAATTTCCATATAAATGTCCGGTTTGTGTAACAAGATTTTCTAGGAAAGAGAGTTTAACAAAGCACAGGTTAGTTCATAAACAAGAGAAAAGTACCATTAATTCAAACACTTCTTACAACTGCTCAATCTGTGATAGAACTTATTCCTCAGAGTTATCCATAAAAAAACACCTACTAgtacacaaaaatgtaaaaaccacAAATGATTCAAGGATTCTCAGACAGACAAGtaacaataaaaactattttaaatgtgaaaTTTGCTGCAAGAAATTTACTAGAAAGTTTGACATGATTAACCATAAACGTTTGCATGATTCTGAATGTCCTatttgtaaaaaactatttgctGGTAAACATACCATGCGCAAACATACGCTAACACATAGTGTGAATAAATCTAATTCgcataaatgtaaaatttgcaaCAAATTATATAGTTCAAGAAGTAACTTGCTAAGGCACATTAAGGTTCATAAGAAGGACCCTCCTGAAAAAGAATGCCCGATTTGCTATAAAACGTTTCTTAGACAAGATGATTTTAGCTCTCATGTGCTTTTACATGATATGACCCAAATACATATATGTACTATTTGCAGTAAATTATTTAGTACAGAAGATCAGTTAAATAATCACATTCTTGTACATAAACATAAAccatataaatgtaaaatttgcaaGAAAGATTATGCCATAAGAAACAGCTTGATTAGACACATGCATGTACATAAAAAGAAGAATCCATCAAATTCTGGCAATCCATCAAAGCCTACGAAAACCCCTAGAAAAAAATTCAggtgcacattttgtaaaaatttatataaatctaGTTACGATTTGAGGATTCATCAAGCTATTCATCTGGAAAGCTATCAATGTGACATAGTAGGATGTCATatagtattttataaaaaagaatacTTGGATCAACATATGCTAAATCATCCGCAACAACTATTACATCCGAAAAGTAATGGACGTACTTACTCGCTTGCTTGTCCAATTTGTCTTAGAACATCGGATTTTCCTGCACGCCTTCAGAGGCATATGACAACTCATGATAATGAAAAACTACCCCTTGCGACATGA
Protein Sequence: MECIEIFDSDEDMETEKLNEKKQVLIENPEKEQNFRDKVTLSAFPLKEIEKGKIDIDRGNLNVDIKNSDEEIKIAEASNFSDLIPKSYFKDDIEKIKDFLLDFEIEDHENEFEKVNENTVNAEINKQSDESDCEKAKNNEDSDGNHTSDETNLADRVYYECSFCGKTFIKSADLDKHIPSHTGKKAYNCMFCKKAYTKREHLTYHQKHKHVTTARRPCTFCGSFIQRETLNKHILDHFKSQPSFECKLCRKKYDNENNLIKHVSAKHNNIRNTCKVCNKEFNSQKLLFQHKSEHWRSIYTCSVCNKTFSNKLLIMKHVNSEHDNLPKEPYMCGICLQKFSECNELVLHKFSHTESSKLVCSHCKLIFSTESALNGHIQAKHLGKAQHKCTNCFKVFSLDIWLKRHLNFFCKGKSVYKSTSKADLVFLSHVCPGCKQSFQIEEDLDVHIRQNHVGELLYKCEKCDVCFTLGRALKRHILFHTEENNTLFPNEKLNTIKTNSPHSKETINNMFVPENNQTHVREELFSCPVCLEKFSTKEQITEHIQKHNSGTYTCKICDIRFQFDKTSLNHVKMHITNTFECRFCEKSFGDKILFQTHMLIHNETLYECSHCGKKWANENALKTRLRGNTKDFACTNCDKKFAEKSGLGTNLEDMFSCRICKVTFGSKGGLNKHMYNHNSNSPLACHQCMRLFEDLRCLNRHNIKFHNFKKPIQKNAKEFPYKCPVCVTRFSRKESLTKHRLVHKQEKSTINSNTSYNCSICDRTYSSELSIKKHLLVHKNVKTTNDSRILRQTSNNKNYFKCEICCKKFTRKFDMINHKRLHDSECPICKKLFAGKHTMRKHTLTHSVNKSNSHKCKICNKLYSSRSNLLRHIKVHKKDPPEKECPICYKTFLRQDDFSSHVLLHDMTQIHICTICSKLFSTEDQLNNHILVHKHKPYKCKICKKDYAIRNSLIRHMHVHKKKNPSNSGNPSKPTKTPRKKFRCTFCKNLYKSSYDLRIHQAIHLESYQCDIVGCHIVFYKKEYLDQHMLNHPQQLLHPKSNGRTYSLACPICLRTSDFPARLQRHMTTHDNEKLPLAT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -