Bgla030295.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Brachypterus glaber
Gene Symbol
znf16l
Assembly
GCA_958510825.1
Location
OY294053.1:26397929-26409440[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 14 3.8e-05 0.0022 19.3 1.5 1 23 179 201 179 201 0.98
2 14 2e-06 0.00011 23.3 3.2 1 23 207 229 207 229 0.98
3 14 2.5e-07 1.4e-05 26.2 1.8 1 23 235 257 235 257 0.98
4 14 2.5e-08 1.4e-06 29.3 0.8 1 23 263 285 263 285 0.98
5 14 7.3e-05 0.0042 18.4 3.1 1 23 291 313 291 313 0.98
6 14 0.0002 0.011 17.0 0.7 1 18 319 336 319 336 0.95
7 14 1e-05 0.00058 21.1 0.4 1 23 406 428 406 428 0.98
8 14 3.5e-07 2e-05 25.7 0.6 1 23 434 456 434 456 0.99
9 14 3.5e-05 0.002 19.4 2.3 1 23 462 484 462 484 0.99
10 14 4.3e-07 2.5e-05 25.4 0.5 1 23 490 512 490 512 0.98
11 14 4.5e-07 2.6e-05 25.3 0.3 1 22 518 539 518 539 0.96
12 14 8.9 5.1e+02 2.4 0.6 2 17 582 597 581 598 0.84
13 14 1e-06 5.7e-05 24.3 2.1 1 23 697 719 697 719 0.99
14 14 4.2e-06 0.00024 22.3 3.8 1 23 725 747 725 747 0.99

Sequence Information

Coding Sequence
ATGGAGgaactaaattttgaaaaaatctgtcGAATATGTTTAAACATAAGTTCTATAAAACAACTGAgtgttaaacataaaaaactaaacgttgattattattttatattaaataattgtgCGGCAATACAGgCAAAAGAAGGCGATAGTTTACcaaacaaaatatgtaaaaaatgcgaaaaactacttgttaacagttacaaatttcaaaaaacgaTAACAGAAAACgatcaaaaattaaaaggcATAGTTGAATTGAAGAAAAATGCTGTTAAAGAAATAGATGAAAAAATATGGGAAAAATCAAACGAATTTAATGAAAATGATTCTAATGATGACAATGATGATATAAACGATGATGATTATGAAGTAAACAATGATAATAATGAGGTAAACAATCACAATAATGATGTAAACAATGATGTACAAGATCCAGAACCCTTGGAAATGGTCAAAGTAGAATGCCTTGTGgaagaaaaactaaaagaaaagacatcaaaaaagaAGCCAAATAGGAAACCACTAGAAACTAAATTTCAGTGCGAGGTTTGtggaaaatttttcaattttaaaacaaatatgatTGAACATAGGAAAATTCATACAGGTGAAAAGCCATTTCAATGCCAGGTCTGTGGAAAGAGGTTTAGAACAAAGGCACATTTAAGTGATCATAAAAGAATTCATACAGGTGATAAAAGCTTTGAATGCGACATCTGCTCCAAAAAGTTCATCCAATACAGTAACTTAAAACGCCATCTGCGCATGCACGCAGGCGAAAAGCCCTTTATGTGCTCCGTCTGTGGAAAAAGTTTCACCCAGCAGGCCAACTTGCAAGTCCACACTAGAACCCACTCAGGGGAAGCCCCATACGAATGCGAAGTTTGCCACAAGAAGTTCAAACAAGACACCAACATGCGAAAACATGCGCGAATACACTCGGGGATTAAGCCCTACACGTGTAACTTTTGTGGAAAAGGATTTTCAAACTCATCAAACCTTATCAAAAATTATGATTCAAATGAATTAGAAGAAAAGTTTGAGATAGAAACAAGTGACAGAAATAACTCTGAAGATGAAGAAGATAATGTCGAAACGTTGAATAATCGCCCTGAAGATGGCTCATATCCGATTGAGGTGGTTAAAGTCGAGTGTTTAGTTGATGAGGCTCAACACACAGTAAAGAAAAAAGGACCCAAACCAGTGGAAAACACTTTTATCTGTGATGTATGtggaaagttttttaattataaggGAAACATGCTTGAGCATATGAAAATTCACACAGGTGAAAAACCATTCCAATGTCCAGTGTGTGGAAAACGGTTTCGGAGAATTGGGCAACTTAAGGTACACAAAAGGATACACacagGCGAAAAAACTTACGAATGCAAATTTTGTCAGAGAAAATTTATCCAAGATACCAACTTAAAAATCCACTTACGCACTCATTCTGGTGAGCGACCTTACATGTGCACAGTGTGCGGGAGGTCATTCGCACAGTCTTCCAACCTGTTAGTGCACAACAGAACCCATACTGGAGAGTTGCCTTACAAATGTGAAATATGCGGCAAAGGGTTCACGAATTCTAGTTATTTGAAGTCACATGTTAGAATGTGCTTAGATAACAGTCCTGTTAAAGAATTAAGTGACAAACATAAGAAATTCAAAGTGGACTATTATTTTCTGTTGAATGCTTGCACTTCAGTACAGGCTGATGTCAACGATACATTACCATCAAAGATGTGTAAAAAATGCGAGAAAGTTTTAGtaaactattataaatttagaaATTCGGTAGCAGAAaatgatataaaattaaaagatatagttgaattaaagaaaaatattgtattagAAGATATAGAACTTTTAAAAACTGAAGATGAAACAGAAGAAATAAAAGAAGAAGATTATTATAGTTCAGGAAATGATGATAATACTGATAATACAGATAACACagAATTGATCCCAGAACCGGATCCTATAAAAATGGTCAAAGTAGAATGCGAAACAGAGCAACCCGAATCCggcaagaaaaagaaaaagaaaatcagAAAGTTACAGAAAAATTCGGTAGACAATTTCTTTCAGTGCGAAGTTTGTGGAAAACATTTTACATACAAGGGCAATATGCAGGAACACATGAAAATCCATACAGGTGAAAAGCCATATCAGTGCCAAGTTTGTGGGAAACGGTTTAGAAGGGTCAGCCATTTTCAAATTCATAAACGAATTCATACAGACTGGGTACAAACTGTGACCTTTATCAGAATGTGTACGGGCCACAGTCGGACCTACGCACATTTAAACAGAATTGGGGTAAGGGAGAACCCGTACTGTGAGTGCGGGGCATTTGGGGACTTGGACCACTTAATTCTTGAGTGCCCTATAAACGCCATAAACGGCTTTGATATCTACAGGAGATTACAAAAGCTTGGAATTGAGTCACCCTTCAGTATGGCAAACGTCATAACTCAACTTAATAACAATATTATGCAAAGGTTATGGTACTATCTTAGGTACAACCACATTGACCTATAA
Protein Sequence
MEELNFEKICRICLNISSIKQLSVKHKKLNVDYYFILNNCAAIQAKEGDSLPNKICKKCEKLLVNSYKFQKTITENDQKLKGIVELKKNAVKEIDEKIWEKSNEFNENDSNDDNDDINDDDYEVNNDNNEVNNHNNDVNNDVQDPEPLEMVKVECLVEEKLKEKTSKKKPNRKPLETKFQCEVCGKFFNFKTNMIEHRKIHTGEKPFQCQVCGKRFRTKAHLSDHKRIHTGDKSFECDICSKKFIQYSNLKRHLRMHAGEKPFMCSVCGKSFTQQANLQVHTRTHSGEAPYECEVCHKKFKQDTNMRKHARIHSGIKPYTCNFCGKGFSNSSNLIKNYDSNELEEKFEIETSDRNNSEDEEDNVETLNNRPEDGSYPIEVVKVECLVDEAQHTVKKKGPKPVENTFICDVCGKFFNYKGNMLEHMKIHTGEKPFQCPVCGKRFRRIGQLKVHKRIHTGEKTYECKFCQRKFIQDTNLKIHLRTHSGERPYMCTVCGRSFAQSSNLLVHNRTHTGELPYKCEICGKGFTNSSYLKSHVRMCLDNSPVKELSDKHKKFKVDYYFLLNACTSVQADVNDTLPSKMCKKCEKVLVNYYKFRNSVAENDIKLKDIVELKKNIVLEDIELLKTEDETEEIKEEDYYSSGNDDNTDNTDNTELIPEPDPIKMVKVECETEQPESGKKKKKKIRKLQKNSVDNFFQCEVCGKHFTYKGNMQEHMKIHTGEKPYQCQVCGKRFRRVSHFQIHKRIHTDWVQTVTFIRMCTGHSRTYAHLNRIGVRENPYCECGAFGDLDHLILECPINAINGFDIYRRLQKLGIESPFSMANVITQLNNNIMQRLWYYLRYNHIDL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
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90% Identity
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80% Identity
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