Bgla028559.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Brachypterus glaber
Gene Symbol
-
Assembly
GCA_958510825.1
Location
OY294053.1:614421-631065[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 18 1.1e-05 0.00065 20.9 0.1 1 23 117 139 117 139 0.98
2 18 0.0003 0.017 16.5 6.3 1 23 145 167 145 167 0.98
3 18 5.9e-05 0.0034 18.7 3.4 1 23 173 195 173 195 0.98
4 18 9e-07 5.1e-05 24.4 2.8 1 23 201 223 201 223 0.99
5 18 0.00018 0.01 17.1 5.2 1 23 229 251 229 251 0.98
6 18 2.8e-06 0.00016 22.8 5.6 1 23 257 279 257 279 0.98
7 18 3.7e-06 0.00021 22.5 5.7 1 23 533 555 533 555 0.99
8 18 0.00013 0.0077 17.6 2.4 1 23 561 583 561 583 0.98
9 18 2.4e-08 1.4e-06 29.3 3.5 1 23 589 611 589 611 0.99
10 18 6.9e-06 0.00039 21.6 4.3 1 23 617 639 617 639 0.98
11 18 2.4e-06 0.00014 23.1 5.5 1 23 803 825 803 825 0.98
12 18 2.2e-05 0.0013 20.0 2.8 1 23 831 853 831 853 0.98
13 18 4.8e-05 0.0027 19.0 3.6 1 23 859 881 859 881 0.97
14 18 4.8e-05 0.0027 19.0 4.8 1 23 887 909 887 909 0.99
15 18 8.6e-08 4.9e-06 27.6 2.7 1 23 915 937 915 937 0.99
16 18 8.1e-06 0.00046 21.4 5.1 1 23 943 965 943 965 0.98
17 18 0.021 1.2 10.6 7.9 1 23 975 997 975 997 0.98
18 18 0.00032 0.018 16.4 5.3 1 23 1003 1025 1003 1025 0.98

Sequence Information

Coding Sequence
ATGGAGGCTATAAAGATAGAGAAAGAAGTTGGGATTCAGGAGGACCAGTTAGAGatcaaaataaagcaagaaCCCAtagaagataattttaaaatagaagaaaagaaaacatgtaataataaaaataaagatgattctaattttaacaaaaataacatcTCCGCAacaggaaatttttttattctggatgatgaacatattaaaaaagaaattgctGAACAACAAAATTCTAATAacgaattaaatattaaaaaggaaaACGAAGAACAAGTAAATACTATGGAAGAAGATGTgaagcaaaatttaaaacaagtaTGTAATGAAAATACACAAACAAGGGAGTTACCATACATTTGCGCGTACTGTGGGAAAGCCTTTTCATTTCCatcagaaataaaaatacatcttcgCTCACATACTGGGGAGAAACCTCATAAATGTTCGCATTGTGAGAAAGCCTTTTCAAAAGGATCAAATCTAAAAGCACACATTCACAGACATACTGGTCACAAACCTCATAAATGCATGCACTGTGAGAAAGCCTTTTCAGAAGTATCGTATTTAAAAGCACACATTCGCACGCATATCAAAGAGAGACCCTATAAATGCACGCATTGTGAGAAAGCCTTTTCACATCCATCAGGTTTAAAAGTACATATTCGCTTACATACTAGACAAAAACCTCATAAATGCATGCAATGCAAGAAAGCCTTTTCAGAAGTATCACATTTAAAATCACACATTCGCACGCATATAAAAGAGAGACCCCATAAATGCACGCACTGTGAGAAAGCCTTTTCACATCCATCAGGTTTAAAAGTACATATGCGCTCGCATACTGGGGAGAAACCCTACAAATACATGGAGGCTGTTAATATAAAGATAAAGGAGGAAATAAAAGCTTATGAGGACCCGTTGGAGATGAAAATAAAGCAAGAACTTATAGGTGAAGCTTTTAAAATGGAGGAATCTGTTAACATAAAGATTGAGGAAGAAATCGAGATTCACGAGGATCCGTGGgagattaaaataaagcaagaaCTTATATGTGATGattttaaaatggaaataaAGAAAGATATATGTAATAATGAAGATAATGATGATTCTATTTTTAAAGAGAATAACATAAAACAAGcatTTTATTTAAACATGGAGGCTGTTAATATAAAGAAAGAGGAAGAAATTGAGTTGTTggagttaaaaataaagcaaGAATTTATAGGTGAAGATTTTAAAATGGAGGAAGCTGTTAAAACAAAGATGGAAGAAGAAATTGAGATCCACGAGGATCAGTTGACattcaaaataaaacaagaacTCATAGGTGATGATTTCAACTTGGACACAGAGAACAAATTATGTAATAGTAAGGATAAAGACAAGGCTATTTTTAAAGAGAATAAGGAATTTCCAAAAGGAGAATTTTCTATCCTAGATgatgaacattttaaaaaagaaattgtggaacaaataaattctaataatgaattaaatattaaaaaggaaaaagaacAAGTAAACAATGTAGAAGAAAATATGAAGCAACATTTAAAACAACCATATAATGAAAATACACTAGCACGAGAGAAACTTTTCAAATGCGCGCACTGTGAGAAAGCCTTTTCAAATTCATCATGTTTAAAAAGACATATTCGCTCACATTCTGGGAAAAAACCTCATAAATGCCCGCACTGTGAGAAAGTCTTTTTAGAAGTATCAAATTTAAAGGTACATATCCGCACGCATACTGGGGAGAAGCCATATAAATGTAATCACTGTGAGAAGGTATTTGCACGttcatcaaatttaaaacaacatATTCGCACTCATACTGGGGAGAAGTCCCATAAATGCACGCACTGTGAGAAAGCCTTTTCagaaatgtcaaatttaaagGTACACATCCGCACGCATACTGGGAAGAAGCCATATCAATTTTATTTAAACATGGAGGCTGTTAATATAAAGAAAGAGGTAGAAATTGAGATTCATGGGGATCCGTTggagttaaaaataaagcaaGAATTTATAGGTGAAGATTTTAAAATGGAGGAAGCTGTTAATACAAAGATAGAAGAAGAAATTGAGATCCACGAGGATCAGTTGACgttcaaaataaaacaagaacTCATAGGTGATGATTTCAACATGGACAcagggaaaaaaatatgtaatagtaaacataaagACGATTCTATTTTTAAAGAGAATAAGAAATTTCCAAAAGGAGAATTTTTTATCCTAGATgatgaacattttaaaaaagaaattgtgGAACAAATAAATTCTAACAAAGaattaaatattgaaaaggAAAAAGAACAAGTAAACAATGTAGAAGAAAATATGAAGCAACATTTAAAACAACCGTGTAATGAAAATACACTAACAAGAGAAAAACTCTTCAAATGCAAACACTGTGAGAAAGCCTTTTCATATTCTTCAAGTTTAAAAAGACATATTCGCTTTCATTCTGGGGAGAAACCTCATAAATGCACATACTGTGGAAAAGCCTTTTCACAAGCTTCAAGTTTAAAGTTTCATATTAGCACGCATACAGAGGAGAGACCCCACAATTGCACACACTGTGAGAAAGCCTTTTTTCGTTTGTCAGATTTAAAAGCGCACATTCTTACCCATACTAGTGAGGGACCCTataaatgcacgcactgtaagAAAGCCTTCTTTCGTTTATTAGATTTAAAAACGCACATTCGTACTCATACTGCTGAGAGACCCTATAAATGCACGCACTGTGAGAAAGCCTTTTCAAATTCATCAAATTTAATAACTCATATCCGCTCACATACTGGGGAAAAACCTCATAAATGTACGCATTGTGAAAAATCCTTTTCAATAGTATCAAATTTAAAGGTACACATGCGCACGCATGCTGAGGGCAGAACCGAGGAAAGAGCCCATAAATGCACGCACTGTGAAAAGGCCTTTTTCTGTTTATCAGATTTAAAAAGACACTTACGTATCCATACTGAGGAGAGACCCCATAAATGCACGCACTGTGTGAAAGCCTTTTTCTCTTTATCAGAATTAAAAACACACGTTCGTACGCATACTGGGGAGAAACCCTTTAAATGCAAGCActGCGGATGCAAAAAATGGTATCACGAAAAATGCATTAACGTCACTGAAAAAGTCCTACAACAAATAATAGACCGTAAAAAAGTCTTTATATGTGAAGCATGTTAcgaaagtgaggttatgtcatCATCAAGCGACCAAGAAAACGACAAAAACTCGTCAAATTCTTCAAACGAATCTGACACTGAAGAAGACTGCGGAAAAGGTGACTACACTCTCGCAGATGTAATGCTAACACttagaaaaatggaaaaaacaaacacaaaaatattgaaaaaatttcaaGAGCAAAAGAAGGTAAACAGAGAACTTAGGAAAGAAATTGATGATTTGAAACAAGAACAAAAGCGTCTAAACAGCCTAATAAACATGAATACACGTAGAACTGACGTAACTGAGCAAGAAAAACTGGAGAACAATATTATTATCTCTGGCATACCAGAAGCCGAAATAGAAGCTACGCAAGATCTTAGGGAAATAGTAAAGAAGATAGCAAagcataataaaattaatatcaagGAAGCAGACATCGTACAatgcttaaaaataaaactaaaagacAACGAACAACGTATTAAAGTGGAATTTAAAACCAAtgaacaaaagaaaaacttcATGAAACGACAAGAAGCTGACTTAACAACAAAAGCAATAGGAATGAATAaagaagataaaatatacataaatcaCGAACTTACCAAGCAAAACCAGCTACTTTTTAAACTAGCACGTGATAAAAAGAAGTTGTTAGGTTTCAAATTTGTATGGTACCAACAAGGAAACATCCTAATGAGAGAAAAAGAAAACAGCAAAATATTTCATGTTCGGGATGAGTTGTCTctagaaaatttacaaaataataataagtga
Protein Sequence
MEAIKIEKEVGIQEDQLEIKIKQEPIEDNFKIEEKKTCNNKNKDDSNFNKNNISATGNFFILDDEHIKKEIAEQQNSNNELNIKKENEEQVNTMEEDVKQNLKQVCNENTQTRELPYICAYCGKAFSFPSEIKIHLRSHTGEKPHKCSHCEKAFSKGSNLKAHIHRHTGHKPHKCMHCEKAFSEVSYLKAHIRTHIKERPYKCTHCEKAFSHPSGLKVHIRLHTRQKPHKCMQCKKAFSEVSHLKSHIRTHIKERPHKCTHCEKAFSHPSGLKVHMRSHTGEKPYKYMEAVNIKIKEEIKAYEDPLEMKIKQELIGEAFKMEESVNIKIEEEIEIHEDPWEIKIKQELICDDFKMEIKKDICNNEDNDDSIFKENNIKQAFYLNMEAVNIKKEEEIELLELKIKQEFIGEDFKMEEAVKTKMEEEIEIHEDQLTFKIKQELIGDDFNLDTENKLCNSKDKDKAIFKENKEFPKGEFSILDDEHFKKEIVEQINSNNELNIKKEKEQVNNVEENMKQHLKQPYNENTLAREKLFKCAHCEKAFSNSSCLKRHIRSHSGKKPHKCPHCEKVFLEVSNLKVHIRTHTGEKPYKCNHCEKVFARSSNLKQHIRTHTGEKSHKCTHCEKAFSEMSNLKVHIRTHTGKKPYQFYLNMEAVNIKKEVEIEIHGDPLELKIKQEFIGEDFKMEEAVNTKIEEEIEIHEDQLTFKIKQELIGDDFNMDTGKKICNSKHKDDSIFKENKKFPKGEFFILDDEHFKKEIVEQINSNKELNIEKEKEQVNNVEENMKQHLKQPCNENTLTREKLFKCKHCEKAFSYSSSLKRHIRFHSGEKPHKCTYCGKAFSQASSLKFHISTHTEERPHNCTHCEKAFFRLSDLKAHILTHTSEGPYKCTHCKKAFFRLLDLKTHIRTHTAERPYKCTHCEKAFSNSSNLITHIRSHTGEKPHKCTHCEKSFSIVSNLKVHMRTHAEGRTEERAHKCTHCEKAFFCLSDLKRHLRIHTEERPHKCTHCVKAFFSLSELKTHVRTHTGEKPFKCKHCGCKKWYHEKCINVTEKVLQQIIDRKKVFICEACYESEVMSSSSDQENDKNSSNSSNESDTEEDCGKGDYTLADVMLTLRKMEKTNTKILKKFQEQKKVNRELRKEIDDLKQEQKRLNSLINMNTRRTDVTEQEKLENNIIISGIPEAEIEATQDLREIVKKIAKHNKINIKEADIVQCLKIKLKDNEQRIKVEFKTNEQKKNFMKRQEADLTTKAIGMNKEDKIYINHELTKQNQLLFKLARDKKKLLGFKFVWYQQGNILMREKENSKIFHVRDELSLENLQNNNK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00244430;
90% Identity
iTF_00244430;
80% Identity
iTF_00244430;