Bgla028170.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Brachypterus glaber
Gene Symbol
Znf711
Assembly
GCA_958510825.1
Location
OY294052.1:24938666-24944544[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 29 7.5e-06 0.00042 21.5 2.8 1 23 9 31 9 31 0.98
2 29 0.0019 0.11 13.9 5.7 1 23 37 59 37 59 0.99
3 29 0.59 34 6.1 8.0 1 23 97 119 97 119 0.98
4 29 1.2e-05 0.00066 20.9 1.7 1 23 126 148 126 148 0.99
5 29 0.0056 0.32 12.5 1.6 3 23 156 176 154 176 0.96
6 29 0.0044 0.25 12.8 2.8 1 23 182 205 182 205 0.97
7 29 2.6e-05 0.0015 19.8 2.5 1 23 210 232 210 232 0.98
8 29 0.031 1.8 10.1 3.7 2 23 353 374 352 374 0.97
9 29 0.00036 0.02 16.2 3.9 1 23 379 402 379 402 0.95
10 29 0.0023 0.13 13.7 0.9 2 23 424 446 423 446 0.95
11 29 0.012 0.65 11.5 2.0 3 23 454 475 453 475 0.93
12 29 0.00027 0.015 16.6 1.3 2 23 500 521 499 521 0.96
13 29 0.00013 0.0071 17.7 3.0 1 23 526 549 526 549 0.96
14 29 0.00025 0.014 16.7 1.6 1 23 558 580 558 580 0.99
15 29 0.00071 0.04 15.3 5.2 1 23 586 608 586 608 0.98
16 29 0.00018 0.01 17.1 5.4 1 23 630 652 630 652 0.98
17 29 2.5e-05 0.0014 19.8 3.7 1 23 658 680 658 680 0.99
18 29 2.1e-05 0.0012 20.1 0.7 1 23 680 702 680 702 0.98
19 29 2.5e-05 0.0014 19.9 0.7 1 23 750 772 750 772 0.99
20 29 8.7e-06 0.00049 21.3 1.5 1 23 778 800 778 800 0.98
21 29 0.00025 0.014 16.7 4.3 1 23 836 858 836 858 0.97
22 29 0.41 23 6.6 2.2 3 23 866 886 864 886 0.95
23 29 1.7e-06 9.6e-05 23.5 3.3 1 23 892 914 892 914 0.98
24 29 0.001 0.058 14.8 7.1 1 23 919 941 919 941 0.98
25 29 1.1e-05 0.00061 21.0 0.8 1 23 947 969 947 969 0.99
26 29 0.00029 0.016 16.5 2.0 1 23 976 998 976 998 0.99
27 29 8.4e-05 0.0048 18.2 4.1 1 23 1004 1026 1004 1026 0.97
28 29 1.7e-05 0.00094 20.4 0.7 1 23 1032 1054 1032 1054 0.99
29 29 2.5e-06 0.00014 23.0 3.4 3 23 1062 1082 1060 1083 0.95

Sequence Information

Coding Sequence
ATGCTCGCGAGAGGTCAGACAAAACATCAGTGCTCATATTGCGGGAAAATTTGTGGAGATAAATCTGGGTTAAAAGTGCATATACGTACGCATACAGgtgaaaaaccttttaaatgcaAACATTGCGATAACAAATATAGAGAAAAACGGAATTTAGAGCAACACGAGCGAAAACATCAATTCCCAATTTGCCGGGAAATATTTATCAATACAACTGAATTAAAGGCATCATACAGCCAAAGAGAAGGCATGTTAAGTCACATAGAAAAGCACGATATCGAAGAACAGCACGAGTGTTCTTATTGCAAAAGAAAGTTTCATTTCGAAAGAGTCTTCAAACGCCATGTCCGATCGCACAAAGAGGAGGGAAGAACATACGAATGCCCGGATTGTAAAGTTAAGTTCacgagaaaaaaacaatttgaggACCATCGTCGAATACACATAGGGAAAAAACCACATTTGTGTTTTTACTGTGGACTCGGGTTCACACAAATTCGAGATATGTTGAACCACATCCGTAAGCATACCGGAGAGTTACCTTTCGAATGCGCCCATTGCCAGAAAAAGTTTTTCAGAAAGTCAATTTTGATTTCGCACATACAATCCTCACACGCCGGGTCTACATACAAATGTGATTATTGTAGCAAAAAGTTTCCCTCGGAAAGCAAATTAAACACGCATATGTACAATCATGAGGaaaTCGAAGACGATGAAAACAGTAATACAACTGGTAATGATTTATTTtacgaaataaaaaaagaatctgAAAGTGACGACACTGACAGTGACAGAGAAAATGTCATTGAGATTGAAAATATTGAAGAAGATGAAAATAGCGATACAACCGGTCGAGATTTATTTtacgaaataaaaaaagaatctgACAGTGACGACATAGAATACGACATAGACAATGCCATACAGATTGAAAATCTTGAGGTTATAAATActagaataaaaaaagaaatagaatATGTTAATATCGAGGAAATTAAAGTAGAGAACAAAGGAAGTAACCATAAAACCGTAAAATTTGTTAAAGATAAAACCGTTACATGTgatatttgcaataaaaaaagttcatgcaACTCCCAGTTAAATCGccacaaaaaaatacaccttCCCGAAAATTTTGAATGCGCAGAAtgccacaaaaaatttaaactgaaaTCCTACTTAGTTAAGCACATCAAATTTCAACATACTGGCGAAAAGAAACAAATTAACAAGAATCATGAAAATTTGGATATGGAAAGAAAGATTTGGGTCTGCAACATTTGCAATGAAACCGCTTTTTCTACCAGAAACCAGTTAAAACGCCATAGAAAACTGCACGAAGCTGATTATTCATTTGGGTGCTTGGCATGTAACagaaggtttaaattaaaagaacaccTGGACAGACATATGAAAATACTACATGAAAGCGTTAATGACGATAAAAATAATAGCAATTTAGATGAAGATAAAATAAAGGCCGAGAAAAAACCCTGGACGTGTAATATTTGCCAAAAAACCGTAACAAGCAAAAATCAGTTATACCGGCACAAGCAAATTCACTTAAAGGAAACCTTTGAGTGTAAAATATGCAAGATGCAGTTTAGATTTCGAGCAAATTTGTTTAGGCATATGAAATTTCTGCACGGAGACCGAAGTACCGATCTTCCATATCAGTGTTCGTTCTGCGAGAAACAGTTTAAGTTAAACAACACGCTGGTACGCCATGTTAGGATCCATACTGGAGAGAAACCCTTCAAATGTACCATTTGCAGCAAAAGATTCAATCAAGGTTGTAGTTTAAACAGGCACATGTTTTCCCACGCCAAAGATGAAACAATCGACGGTAGCCAGAAGCATCAAATCCTCGCGAAACGTCAGCCACAACATCAGTGCTCATATTGCGGAAAACTCTGCTTCGATAAAAGTTTGTTAACCTCGCATATACGTACCCATACGGGCGAGAAACCTTATCAATGCAAACACTGCGGTAAAAGATATAGCGAAAGATCAAACGTACTCAAACACGAGCGCAAACATCAATGCCCACATTGCGAGgaaatatttatcaataaaactgAGTTAAACGCTCATATAGGTACTCATACAGTTGAAGAACCTGATGAGTGCGAGAAATTTAATTTGAGTACTCATACAAATGaaaaacctaataaaaaattgaatttaaagcCCATAAAGCAAGACGTCGTCAAACGTCCTAATGGGAAATTGAAAGAGGTTAGGAGTTACGAATGTACTTATTGCGTTAAGGCATTCGCCCTGAGAAGCCGGTTAAAACGTCACATCAGAATCCATACTGGAGAGAAGCCGTTCATGTGCCCTCATTGCCCGTACAAGTTCAACCAAAAAGAATCCTTGTTAAATCACATAGAAACGCACAACATCGAAGAAAAAAACTACGAGTGTTTTTATTGCAAGAAAAAGTTCCATTTTGAAAACATCTTCAAATACCACGTCCGATTGCACACTGGCGAGAGAACAGTACACGAATGCCCGGATTGTAAGAAAACGTTCATGAGGAAAACAGATTTTACCGTACATCATCTGATCCACACAGGGGAAAAACCACATTTGTGTTTTTACTGTGGAAGCAGGTTCCAACTCGGTCGAGATTTGACCAATCATATTCGACAGCACACCGGAGAGTTGCCTTTCGAATGTTCCTATTGCCAGAAGAAGTTTTCCAAAAAGTCGAACTTGACTTTGCACCTTCGACTGCACACCGGGTTTACATACAAATGTGCTCACTGCGACCAGAAATTTTCCTCGAAAAGCAGATTAAAAACGCACGTAAAGCATCATGAGGGGGAGAAGCCTTTTAAATGCGGTCTTTGCCCTAAATCGTTTTTCACTGAAAGCGGGTTAAGGAATCACGTCCGATCCCATAATTATGTGAAAAAGACATATAGCTGCGAGTATTGCAGCAAAAAGTGTTCTTCAAGCATAGGTTTAGCTTGGCATACTAGAACTCATACAGGAGAGAAGCCATACATGTGCGATTATTGTGACAAGACGTTTATCGCAAAGTCTAACTTGCATAAGCATCACTTGTGGCATAGAGGAGAGGGGAAATACGAGTGCTCTTATTGTGAGAAAAAGTATGTCGATAGAAATCAGTTAGTTATACATATTAGAAAGCATACTGGTGAAAAGCCGTATGGATGTGAacaatgcagtaaaaaattcaGCACCAAAAGCAACTTGAACCAGCATATGCGATGGCATCATGGTAGTGATGACGATTACTCTTCGTCAACTCACAAGAACGTTTCTTAA
Protein Sequence
MLARGQTKHQCSYCGKICGDKSGLKVHIRTHTGEKPFKCKHCDNKYREKRNLEQHERKHQFPICREIFINTTELKASYSQREGMLSHIEKHDIEEQHECSYCKRKFHFERVFKRHVRSHKEEGRTYECPDCKVKFTRKKQFEDHRRIHIGKKPHLCFYCGLGFTQIRDMLNHIRKHTGELPFECAHCQKKFFRKSILISHIQSSHAGSTYKCDYCSKKFPSESKLNTHMYNHEEIEDDENSNTTGNDLFYEIKKESESDDTDSDRENVIEIENIEEDENSDTTGRDLFYEIKKESDSDDIEYDIDNAIQIENLEVINTRIKKEIEYVNIEEIKVENKGSNHKTVKFVKDKTVTCDICNKKSSCNSQLNRHKKIHLPENFECAECHKKFKLKSYLVKHIKFQHTGEKKQINKNHENLDMERKIWVCNICNETAFSTRNQLKRHRKLHEADYSFGCLACNRRFKLKEHLDRHMKILHESVNDDKNNSNLDEDKIKAEKKPWTCNICQKTVTSKNQLYRHKQIHLKETFECKICKMQFRFRANLFRHMKFLHGDRSTDLPYQCSFCEKQFKLNNTLVRHVRIHTGEKPFKCTICSKRFNQGCSLNRHMFSHAKDETIDGSQKHQILAKRQPQHQCSYCGKLCFDKSLLTSHIRTHTGEKPYQCKHCGKRYSERSNVLKHERKHQCPHCEEIFINKTELNAHIGTHTVEEPDECEKFNLSTHTNEKPNKKLNLKPIKQDVVKRPNGKLKEVRSYECTYCVKAFALRSRLKRHIRIHTGEKPFMCPHCPYKFNQKESLLNHIETHNIEEKNYECFYCKKKFHFENIFKYHVRLHTGERTVHECPDCKKTFMRKTDFTVHHLIHTGEKPHLCFYCGSRFQLGRDLTNHIRQHTGELPFECSYCQKKFSKKSNLTLHLRLHTGFTYKCAHCDQKFSSKSRLKTHVKHHEGEKPFKCGLCPKSFFTESGLRNHVRSHNYVKKTYSCEYCSKKCSSSIGLAWHTRTHTGEKPYMCDYCDKTFIAKSNLHKHHLWHRGEGKYECSYCEKKYVDRNQLVIHIRKHTGEKPYGCEQCSKKFSTKSNLNQHMRWHHGSDDDYSSSTHKNVS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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