Bgla028621.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Brachypterus glaber
Gene Symbol
-
Assembly
GCA_958510825.1
Location
OY294053.1:1143089-1149938[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 26 1.5e-05 0.00088 20.5 5.0 1 23 81 103 81 103 0.99
2 26 0.0011 0.065 14.6 3.2 1 19 109 127 109 131 0.91
3 26 0.02 1.1 10.7 1.5 1 23 137 160 137 160 0.96
4 26 1.8e-05 0.001 20.3 1.4 1 23 166 188 166 188 0.97
5 26 5.1e-06 0.00029 22.0 2.2 1 23 194 216 194 216 0.96
6 26 0.00048 0.027 15.8 0.3 1 23 222 245 222 245 0.97
7 26 1.8e-06 0.0001 23.4 2.0 1 23 342 364 342 364 0.98
8 26 8.9e-06 0.0005 21.3 5.6 1 23 370 392 370 392 0.98
9 26 7.3e-05 0.0042 18.4 0.4 1 23 398 420 398 420 0.96
10 26 6.2e-06 0.00035 21.8 1.6 1 23 425 447 425 447 0.98
11 26 0.00038 0.022 16.1 1.8 3 23 455 475 455 475 0.99
12 26 0.0008 0.045 15.1 4.9 1 23 481 504 481 504 0.97
13 26 6.6e-06 0.00037 21.7 2.5 1 23 571 593 571 593 0.99
14 26 1.3e-05 0.00075 20.7 4.8 1 23 599 621 599 621 0.99
15 26 0.0004 0.023 16.1 0.7 1 23 627 649 627 649 0.97
16 26 0.00019 0.011 17.1 4.6 1 23 655 677 655 677 0.98
17 26 0.0011 0.064 14.6 1.9 3 23 685 705 684 705 0.98
18 26 0.008 0.45 12.0 0.2 1 23 711 734 711 734 0.90
19 26 2.5e-06 0.00014 23.0 1.7 1 23 804 826 804 826 0.98
20 26 0.00029 0.016 16.5 3.2 1 23 832 854 832 854 0.99
21 26 0.00016 0.0088 17.4 0.6 1 23 860 882 860 882 0.97
22 26 1.2e-05 0.0007 20.8 3.0 1 23 887 910 887 910 0.96
23 26 1.5e-06 8.2e-05 23.7 0.7 1 23 915 937 915 937 0.96
24 26 0.011 0.62 11.5 5.5 1 23 943 966 943 966 0.95
25 26 0.00051 0.029 15.8 1.4 3 23 1070 1091 1068 1091 0.96
26 26 0.025 1.4 10.4 3.2 1 23 1157 1180 1157 1180 0.98

Sequence Information

Coding Sequence
ATGGAAGCTGATACATCTCAAACAGAAGAAACAAAAACCCCTATCGAAAGAGATGAAGATTCTCCAGTTTTCgacataaaatacataaaagaagAACGAAAAGATGAAGAAGAGGAAGAATACAAAAACGAAGAAGAAGACTTTGAAAATGAAGAAGATGAAGAAAATCCTGAATCCGCACAGcttgataaagaaaaaaatcctaCATCAACCGGTAGCAGTAAAGGTAGCAAATCTGCGTACCAGTGCAACATATGCGACAAAAAATACGACTACAAATGTAAGTTGACCAGACACATGCGCATCCATACCGGCGAGAGACCGTATAAATGCAAGCTGTGCGAAAAAAGTTTCTACGAGAAAAGTCATTTACAGTTGCACGATATAACACACACAGGAATCAAGCCGTACCCGTGCAACTACTGCAAAAGCGCATTTTCGCGCCTGTGGGACAGAAACTCGCACATGTTCAAATATCACAAAGAATTGAAGCCGCACGTGTGCAAAAATTGCGGCAAGTCCTACCGAAAAGCCACCGATCTGAGCGAGCACATGAACATTCATCGTGTGGCTATAACGCACGACTGCAGCGAGTGCGGAAAAACGTTTTCCGTACTGAGCGAGTTGAATAAACACAAACGCAGTCATTTCGAGTGGAAACCATTCGAGTGTCCACTGTGCGAGCAAGAATTTCACGTCAAAAGTGAACTGCAAAGTCACATTCTATCGGTGCACAATCCTAATGTCGAAACCGAAACAAAAACCGATGATTGTTACACTAATCCGATAGAAACTACTAAAGTTAAAGTAGaaattgaagaagaagaagcgaATACTGGTGAGATGGAAGATTTAAACGATAAATTTGAAGAAATAGAGGAGCAAGAACACTTGAATAAGTCCATAGACGAAGAAATAAACGACGGTGAGATAGAAAACATCACACAAGACCAAAACGATAAAgataaagaagaaaataaagaagaacCAGAACAAAATGCGACACCAGAAGATAAGTTTATCTTCGAGTGTCCGATGTGCGATAAACGGTTTGATTTCAAGAGTAAATTAAAACGTCACGTGCAAACGCACACTGGTTATAAACCGTATAAGTGCACGCACTGTGATAAATCGTACTACGATAGAAGTCACTTGAAGATACACATACAGTTGCATGTAGATGACAGACCGCACGCATGTGAGTATTGCGGAAAAACGTACGCGCGCATCTGGAGCCTGAACGAACACCTTTTGACGCACAAAGACGAGCCGCACGTGTGCACGCACTGTGGAGACTCCTTCGCTAGAGCTGGCGAGTTAAAAAAACACATGCGTATTCACCCGGTGGAGAAAAACCTTGGTTGCGACCAGTGCGGGGAGAGTTTTACGGAGCAGGCGAAGTTTACTCGGCACAAACGCAAGCACAGCGACGTTAGGCCGTACGCGTGCTCGTTATGCGATAAACGGTTTAAATTAAAGAGCCACGTCAAGAACCATATTCATACGATGCACAGTAAAAAACCGGAAGACTTTGTTTTgggtgttaaaaatataaaaagcgaACCTGTCGATGTTAATGTGGAGTTAGAACAAGGAAATAACAAGGAAGAAACTTTACCCGaagtgaaaaatattaaaaaagaattgaACGATGTGGAGCAATTGGTCATCGATGTAAACCCTGGTGCATCGTATGAGGATAGGTTTATATATGTATGCGAGTTTTGTAATAAAAGGTTCGATTATAACAGCAAATTACTGCGACATTTGCGTACGCACACAGGGGACAGACCGTACAAATGCCCGCACTGTGAGAAAGGATACTACGAAAAAAGCCATCTAAAGTTACACATAAGAACACACACAGGCGAAAAACCCCACTCCTGCAAATACTGCGCGAAATCGTACGCGCGCGTTTGGGATTTGAACGCACATTTGCTCACGCACAGTGGAGTTAAACCGCACACGTGCAAAACTTGCGGCAAAAGTTTCAGGAGAGTGTGCGAGCTGCAAGATCACGTGCTTACGCACCGTGTGATGGTTTCACATGGTTGCACCCACTGTGCGATTTCGTTTCCGACGTTATCGGAGTTGAATAGACACATGCACGAGCATTCGGGCGTTCCGCTGTTTTCTTGCCCACTGTGCGACAAAGGGTTTCAGAGTAAAAACGAAGTTAAAGACCACGTGGTTAACATGCACGCGCAAAACCAAGACGATGAGTTACTTAACGAAGAGTTTATTTATAAAGTTAAGGATGTTGATAAAAAAGAAACCGTAGAGTTGGACGAAGGgcaaaattttggtgtaaacaCTGGTGAGATGGATTATATTAAACAGGAATCTGACGATGAATTGATGATTGAGGAAATTCCTAGATGGCGTCTGAAAGATATTTCGAAATTTATTTTCGAGTGTCCACTGTGCGatgaaaaatttgattttaagaGTAAATTGAAGAGGCATATCAGAAAGCACACTGGCGAAAAGCCGTTCAAATGTGACCAATGCGACAAAAGattttttgaaaacacCCAGTTGAGATTGCATTCCCGCACCCACACGGGGGAAAGGCCCCACGTTTGCCGCTACTGTGGAAAAGACTACGCCAGGATTTGGAGCCTGAACGAGCACATGCTGACCCATCAGGAAAAACCACACACCTGTACCGAGTGCAACAAGTCATTCGTTAGGTCTGGAGAACTGAAAAAACACTTTCGATTGCTCCACAAACCGAAGACCCATGATTGTGACATTTGTGGCAAGTCCTTCGATGGGCCCAGTTGGCTCAAACAGCACATGAAAAAACACACGAACGAGCGGCCCTACGATTGTAACATGTGCGAGAAAAAATTCAAGCTCAAATGTCACTTGAAAAATCATGTCGACAGAATTCATACAATCAAAGGCGATATGAAGAAAAAGGCAAGAGTATCGAAAAATAAGGGCAAGAAACTTGGTCCCAGGGCTAAAAAGGTAAAACCGGATCAATCTACAAAGGTTAAAGAAgtgaaaatagaaaaagatgATAATTTTAATGAGGATGATGTCCCATTGCAAGACTTAAGAAATCAAGTTACATCTGGAAATAAAGATtctattaaaacaaatgaagAAAACAATGTTACCGTTGACGAGATAAAACATCACACGAGCATCACACAAAACAATGAATCTTGGGatattgataaaaatttaacacttGCCTGTTCTcaatgtgaaaaaaagtttaaatcgaGACAATTTTTAAACAACCATATTAATAGAATACACTGCCCAACACTGAATGCTAGCACcacagaaaatttaaatgaagTTTTAAACAGtgaaaaatgtatttatgtcaGTATTAAAGCAGAAGGAGAAAATAATCAAATCGACGTAGTACACAATACTGGTGAGATGGAACACGAAAAATCAAATGATAACTTTTCCACCATAGTTCACCAAGACAGCACTAAGTTTTTGTACGAGTGCCCAGTGTGTACAGATAAATTTCAGtttaaaaatcacttaagtagTCATATTAGAAGAAAACACAGTAAAAAGAAAGATATAAATACTCTGGTGGAAAGTGTAAATATTGATTTGGAAGAAAATGTTGATAATCGTTTGGATGGAGTTAACACTGGTGAGATAGAAGGTTAA
Protein Sequence
MEADTSQTEETKTPIERDEDSPVFDIKYIKEERKDEEEEEYKNEEEDFENEEDEENPESAQLDKEKNPTSTGSSKGSKSAYQCNICDKKYDYKCKLTRHMRIHTGERPYKCKLCEKSFYEKSHLQLHDITHTGIKPYPCNYCKSAFSRLWDRNSHMFKYHKELKPHVCKNCGKSYRKATDLSEHMNIHRVAITHDCSECGKTFSVLSELNKHKRSHFEWKPFECPLCEQEFHVKSELQSHILSVHNPNVETETKTDDCYTNPIETTKVKVEIEEEEANTGEMEDLNDKFEEIEEQEHLNKSIDEEINDGEIENITQDQNDKDKEENKEEPEQNATPEDKFIFECPMCDKRFDFKSKLKRHVQTHTGYKPYKCTHCDKSYYDRSHLKIHIQLHVDDRPHACEYCGKTYARIWSLNEHLLTHKDEPHVCTHCGDSFARAGELKKHMRIHPVEKNLGCDQCGESFTEQAKFTRHKRKHSDVRPYACSLCDKRFKLKSHVKNHIHTMHSKKPEDFVLGVKNIKSEPVDVNVELEQGNNKEETLPEVKNIKKELNDVEQLVIDVNPGASYEDRFIYVCEFCNKRFDYNSKLLRHLRTHTGDRPYKCPHCEKGYYEKSHLKLHIRTHTGEKPHSCKYCAKSYARVWDLNAHLLTHSGVKPHTCKTCGKSFRRVCELQDHVLTHRVMVSHGCTHCAISFPTLSELNRHMHEHSGVPLFSCPLCDKGFQSKNEVKDHVVNMHAQNQDDELLNEEFIYKVKDVDKKETVELDEGQNFGVNTGEMDYIKQESDDELMIEEIPRWRLKDISKFIFECPLCDEKFDFKSKLKRHIRKHTGEKPFKCDQCDKRFFENTQLRLHSRTHTGERPHVCRYCGKDYARIWSLNEHMLTHQEKPHTCTECNKSFVRSGELKKHFRLLHKPKTHDCDICGKSFDGPSWLKQHMKKHTNERPYDCNMCEKKFKLKCHLKNHVDRIHTIKGDMKKKARVSKNKGKKLGPRAKKVKPDQSTKVKEVKIEKDDNFNEDDVPLQDLRNQVTSGNKDSIKTNEENNVTVDEIKHHTSITQNNESWDIDKNLTLACSQCEKKFKSRQFLNNHINRIHCPTLNASTTENLNEVLNSEKCIYVSIKAEGENNQIDVVHNTGEMEHEKSNDNFSTIVHQDSTKFLYECPVCTDKFQFKNHLSSHIRRKHSKKKDINTLVESVNIDLEENVDNRLDGVNTGEIEG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-