Bgla028561.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Brachypterus glaber
Gene Symbol
-
Assembly
GCA_958510825.1
Location
OY294053.1:640191-644847[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 23 3.1e-06 0.00017 22.7 1.7 1 23 121 143 121 143 0.98
2 23 4.7e-06 0.00027 22.1 4.2 1 23 149 171 149 171 0.98
3 23 0.00038 0.022 16.1 2.6 2 23 178 199 177 199 0.92
4 23 3e-07 1.7e-05 25.9 3.8 1 23 205 227 205 227 0.98
5 23 4.9e-07 2.8e-05 25.2 2.9 1 23 233 255 233 255 0.98
6 23 0.0041 0.23 12.9 3.7 1 23 261 283 261 283 0.96
7 23 0.00089 0.05 15.0 0.7 1 23 289 311 289 311 0.96
8 23 1.1e-05 0.00065 20.9 4.4 1 23 317 339 317 339 0.98
9 23 1.2e-05 0.00067 20.9 1.3 1 23 345 367 345 367 0.98
10 23 5.6e-06 0.00032 21.9 4.3 1 23 373 395 373 395 0.98
11 23 2.6e-06 0.00015 23.0 2.0 1 23 518 540 518 540 0.98
12 23 3.1e-06 0.00017 22.7 2.8 1 23 546 568 546 568 0.98
13 23 2.1e-06 0.00012 23.2 2.0 1 23 574 596 574 596 0.99
14 23 4e-05 0.0023 19.2 5.1 1 23 602 624 602 624 0.98
15 23 0.00035 0.02 16.2 4.4 1 23 630 652 630 652 0.99
16 23 0.0086 0.49 11.9 0.9 1 23 658 680 658 680 0.96
17 23 1.8e-05 0.001 20.3 4.9 1 23 686 708 686 708 0.99
18 23 1.6e-08 8.8e-07 29.9 3.9 1 23 714 736 714 736 0.99
19 23 3.8e-08 2.1e-06 28.7 3.6 1 23 742 764 742 764 0.99
20 23 4.7e-07 2.7e-05 25.3 1.8 1 23 770 792 770 792 0.99
21 23 2.4e-07 1.4e-05 26.2 3.5 1 23 798 820 798 820 0.99
22 23 1.5e-07 8.7e-06 26.8 2.8 1 23 826 848 826 848 0.99
23 23 0.00015 0.0087 17.4 4.6 1 23 854 876 854 876 0.97

Sequence Information

Coding Sequence
ATGGAGGCTGTTAATTTAAAGATCAAGGAAGAAATAGAAGTTCACGAGAATCCGATAGAAGTAAAGCAAGAACAAATGGGTGAAGATTTTAAAATGGAACTTGAAGAAAGTTTGAGTAATAAACAAAATGTAGGTGATTCTAACTTAAACGAATGTGAGATGTTTCCAAAAGAAGAACTTTTCACCCTAAACGAAGAATTTAAAAGAGAAATAGCTCATCAAGAAATCACTAATAATGAATTCAATATCAAAATGAAAAACGATGGACTAATTTCTTTTCCTTCGCATTTTCTTTTAGAAGACTTTAagaatttttcccaaaaaaatgatttagaagGGCATTTTCGAAGGCAAAGGACCCATAAATGTCCGTATTgtgaaaaagcattttttcaaTCTTCAGATGTGAGAATACACATTCGCACGCATACTGGGGAGAGGCCCCATAAATGCACGCACTGTGAGAAAGCCTTCTCACAGTTGACAGGATTAAAGAGACATATTCGCGTACATACTGGGGAGAGACCACACGAATGCATATTTTGTAAGAAGACTTTCGCTAATTTAGCAGATTTAACACGACATTACCGCACGCACACTGACGAGAAACCCCATAAATGCACGCACTGTGAGAAAGCCTTTTCAGATCCTTCATCTTTAAAAAGACACATTCTAACACATACCAGGGAAAAGCTCTATAACTGCACGCACTGCGGAAAAGCCTTTTCaactttaatatatttaaaaagacaCATGCGATTACACATAGGAGAGAGATCCCATAAATGTACGCAGTGTGAGAAAGGCTTTTTCGAGTTATCACATTTAAGATCACATTTGCTCGCGCACACTAAAAAGAAGTCCTTTAAATGCACTTACTGTGAACAAGACTTTTCATTATTATCCGACTTAAAAGCACATAATTCCGTGCATATTCAAGAGAAGCCTCATAAATGTACCTATTGCGAAAAAGTTTTTACGAAACCAAAAACATTCAAAAGACATATACGCGCGCATACTGGAGAGAGGCCCTACATATGCGCACACTGTGAGAAAGACTTTTCAGATTTGTCGTATTTGAAAACACATATTCTCACGCACACCGGCGAAAAACCTCATAAATGTTCGCACTGTAAAAAAGGTTTTGCAGTTTCGTCGCAATTAAAAGTGCATATTCGCACGCACACAGGGGAAAGTCCTTataaatgcacgcactATAAATATCTGTTGGAAGTTTATAAAATCTTGCAAACCATGGAAGCTGTTAATGTTACGATAAAAGAAGAAATTGAGATTCATGAGGATCAGTTAAAGATCGAAATAAAGCAAGAAACTTTAGGTAAAGATTTAAATATGGAAGTGGAGAAGAAattatatacaaataaaaatgaagGTGATTCTAGTTTTAATGAACATGAAATAATTCCAaaagaagaattttttatcCTGGATGACAAAcatatcaaaaaagaaattgcagATCAAGAGAACAGTAATAATGAGTTAAATAGTAAAAGGGAAGGGGAAGAAAAAGCATCTAGTGAAACATTGTTTAATTGCTCTTATTGTACAAAGGGTTTCTCaagaaaatatgatttaaaaatacatatccAATCACACACTGGATTAAAGCCCCATAAGTGCACGCTCTGTGAGAAAGCCTTTTCAGTTTCATCAactttaaaaacacatattcgcaCGCACACCGGGGAGAGACCCTATAAATGCACGCACTGTGAGAAAGCCTTTccagaaaaatcaaaattagaaTTACACATTCGTACGCATACTGGAAATAAACCATATCAATGCACGCATTGTAAGAAAGACTTTTCAGTATTATCAAACTTGAAAAGGCATGTTCATATTCATACTGACAAGGGTTCTTATAAATGCACGCATTGTGTGAAAGCCTTTTTATCTTCATCAGATTtagaaaaacatatttgtaCGCATACTGGTTGGAGACCCTATAAATGCATGCAGtgtgaaaaatcatttttaaatttctccgacttaaaaatacatactgGTGTGCATACTAGAAAGATACCATATAAATGTACTCTTTGTGAAaaagatttttcaaaatcatCACATTTTAAAAGACATATTGACACGCATACTGGAGAGAGATCCTATAAATGCACGCACTGTGAAAAATCCTTTTCTGATCCCTCATATTTAAGAAGACATATTCGCACACACACTGGCGAGAGACCCTATAAATGCACGCACTGTGAGAAGGCTTTTTCAAATTCATCAGCTTTAAAAACACATATGCGCACGCATACCGGAGAAAGACCCTATAAATGCATGCAGTGTGAGAAAGCCTTTTCTGACCGATCAACTTTAAAAACGCATATTCGCACACATACTGGGGAACAACCTTTTAAATGCTCGCACTGTGAGAAAGCCTTTTCTGATCGATCAACTTTAACATCGCACATTCGCACACATACTGGGGACCTACCCTATAAATGCTCGCACTGTAAGAAAGCCTTTGCAAGTTCATCACAATTAAAAGTCCATATTCGCATGCATACAGGGGAACGCCCTTATAAATGCCTGCACTGTGAAAAAGCCTTTAAGCAaacaacaaatttaaaaagacaTAGCATGCAACACCAATGA
Protein Sequence
MEAVNLKIKEEIEVHENPIEVKQEQMGEDFKMELEESLSNKQNVGDSNLNECEMFPKEELFTLNEEFKREIAHQEITNNEFNIKMKNDGLISFPSHFLLEDFKNFSQKNDLEGHFRRQRTHKCPYCEKAFFQSSDVRIHIRTHTGERPHKCTHCEKAFSQLTGLKRHIRVHTGERPHECIFCKKTFANLADLTRHYRTHTDEKPHKCTHCEKAFSDPSSLKRHILTHTREKLYNCTHCGKAFSTLIYLKRHMRLHIGERSHKCTQCEKGFFELSHLRSHLLAHTKKKSFKCTYCEQDFSLLSDLKAHNSVHIQEKPHKCTYCEKVFTKPKTFKRHIRAHTGERPYICAHCEKDFSDLSYLKTHILTHTGEKPHKCSHCKKGFAVSSQLKVHIRTHTGESPYKCTHYKYLLEVYKILQTMEAVNVTIKEEIEIHEDQLKIEIKQETLGKDLNMEVEKKLYTNKNEGDSSFNEHEIIPKEEFFILDDKHIKKEIADQENSNNELNSKREGEEKASSETLFNCSYCTKGFSRKYDLKIHIQSHTGLKPHKCTLCEKAFSVSSTLKTHIRTHTGERPYKCTHCEKAFPEKSKLELHIRTHTGNKPYQCTHCKKDFSVLSNLKRHVHIHTDKGSYKCTHCVKAFLSSSDLEKHICTHTGWRPYKCMQCEKSFLNFSDLKIHTGVHTRKIPYKCTLCEKDFSKSSHFKRHIDTHTGERSYKCTHCEKSFSDPSYLRRHIRTHTGERPYKCTHCEKAFSNSSALKTHMRTHTGERPYKCMQCEKAFSDRSTLKTHIRTHTGEQPFKCSHCEKAFSDRSTLTSHIRTHTGDLPYKCSHCKKAFASSSQLKVHIRMHTGERPYKCLHCEKAFKQTTNLKRHSMQHQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00244439;
90% Identity
iTF_00244439;
80% Identity
iTF_00244439;