Bgla007600.2


Basic Information
Transcription Factor Domain
Sequence Information
Similar Transcription Factors

Basic Information

Insect
Brachypterus glaber
Gene Symbol
-
Assembly
GCA_958510825.1
Location
OY294045.1:1565031-1572576[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 39 0.13 7.1 8.2 0.1 3 23 50 71 48 71 0.93
2 39 6.8e-06 0.00038 21.6 3.9 1 23 76 98 76 98 0.99
3 39 1.6 93 4.7 0.4 3 23 107 129 105 129 0.88
4 39 8.1e-06 0.00046 21.4 2.0 1 23 134 156 134 156 0.99
5 39 1.4e-05 0.00077 20.7 2.7 1 23 165 188 165 188 0.94
6 39 8.9e-06 0.0005 21.3 0.8 1 23 193 215 193 215 0.98
7 39 1.6e-05 0.00089 20.5 4.2 1 23 221 243 221 243 0.97
8 39 2.5e-05 0.0014 19.9 0.2 1 23 249 272 249 272 0.97
9 39 0.017 0.99 10.9 0.3 2 23 342 364 341 364 0.94
10 39 3.7e-06 0.00021 22.5 1.2 1 23 369 391 369 391 0.99
11 39 1.9e-05 0.0011 20.2 0.2 1 23 427 449 427 449 0.98
12 39 5.7e-05 0.0032 18.7 0.9 1 23 458 481 458 481 0.94
13 39 6.9e-06 0.00039 21.6 0.6 1 23 486 508 486 508 0.98
14 39 0.00071 0.04 15.3 4.7 1 23 514 536 514 536 0.97
15 39 0.057 3.3 9.3 0.1 3 23 614 635 612 635 0.93
16 39 2e-05 0.0011 20.2 3.0 1 23 640 662 640 662 0.99
17 39 0.3 17 7.0 0.2 3 23 671 693 669 693 0.89
18 39 5.3e-06 0.0003 22.0 0.4 1 23 698 720 698 720 0.99
19 39 2.2e-05 0.0012 20.0 2.3 1 23 729 752 729 752 0.94
20 39 0.0002 0.011 17.0 1.1 1 23 757 779 757 779 0.98
21 39 5.6e-06 0.00032 21.9 3.4 1 23 785 807 785 807 0.97
22 39 3.9 2.2e+02 3.5 0.0 1 13 813 825 813 828 0.89
23 39 0.24 13 7.3 2.8 1 23 856 878 856 878 0.97
24 39 0.0031 0.18 13.3 0.7 1 23 887 909 887 909 0.97
25 39 3.2e-05 0.0018 19.5 1.9 1 23 940 962 940 962 0.99
26 39 3.9e-05 0.0022 19.2 0.9 1 23 971 994 971 994 0.95
27 39 6.8e-05 0.0039 18.5 0.3 1 23 1007 1029 1007 1029 0.98
28 39 7.3e-06 0.00042 21.5 0.6 3 23 1037 1057 1035 1057 0.97
29 39 2.2e-05 0.0013 20.0 1.0 1 23 1063 1086 1063 1086 0.97
30 39 2.3 1.3e+02 4.2 3.4 1 23 1133 1155 1133 1155 0.97
31 39 0.14 8 8.0 0.1 2 23 1164 1186 1163 1186 0.87
32 39 0.0084 0.48 11.9 1.1 1 23 1191 1213 1191 1213 0.97
33 39 0.5 28 6.3 0.6 7 23 1227 1244 1224 1244 0.95
34 39 4.4e-05 0.0025 19.1 1.5 1 23 1249 1271 1249 1271 0.99
35 39 0.02 1.1 10.7 2.0 1 23 1280 1303 1280 1303 0.96
36 39 7.4e-06 0.00042 21.5 0.3 1 23 1308 1330 1308 1330 0.98
37 39 2.5e-06 0.00014 23.0 0.6 1 23 1336 1358 1336 1358 0.98
38 39 0.00019 0.011 17.1 0.2 1 23 1364 1387 1364 1387 0.96
39 39 6e-06 0.00034 21.8 0.6 1 23 1393 1415 1393 1415 0.99

Sequence Information

Coding Sequence
atgaGTTTTAAAGAACAGTGTGATCAAGCATTAAATGAAGATGGTACATTTAAATGTTCATTGTGTCGCAAGAAAAGAATTTTAGATaccaaaaaatttagaaaacacATGTATAACCATAGACTTCGAGAAATTGACCCAATCATTTGCACTATGTGTAAAAGAATAATTCCAACCAAGTGGGAACTAGAAAAGCATAAACAGGAGTTGCACAGTGGTATAGAATACAAATGTGATGTATGCCCTAAGAGTTTTTCAAGCCCTTATTGTCTGAAATCACATAAAAAAACACATGAAccaaataactttaaaatattctGTGACCTCTGCACTGGAAAGGAGTTTAACAGTAGGGCTGGATTTCAGCGCCACGTGGACTCAAAGCATAATGGCAACGTTTATAAATGTGATATTTGTAGCAAAGTTTACAGCGACCCGCATATGCTCAAAAGGCACAAAATAACTCATGATGAATTGTATATCGTTCCGACATTTTTATGCAGCGTATGTGGCAAAAAATATAAGAGTAAAAGTCATTTAGAGAATCATCAACAAATAACACATAAGGGCAGAACATTTGTCTGTTATTTGTGTGGTAAAACGATTACCACCAAATCTTCACTGAGGGATCACATAAGGTCACATAACAAAGAAAAACCACATAATTGCGAACATTGTGATAAGTCCTTTGTGAGAAAGGGAACCTTAAATTCGCATCTACTAACTCACACAAAGGAAAAGCCACACGTTTGTAAAGTTTGTGGCAAGTCTTATTCACAACCAGCTCCATTGATTATTCACAAACGCACAGTTCATGAAAAGAAGACGCCGTTTAAAATAATAAATGGCGATATTCTGGATAGAATAAAAATCCTTAACATGAGTTTTAAAGAACAGTATGATCAAGCATTAAATGAAGATGGTACATTTAAATGTCCCTTGTGttgtaaaaaaagaattttagatACCAGAAAGTTTAGAAATCACATGCGTAATCATAAACTTCGCGAAATTGACCCAATCATGTGTACTGTATGTAAAAGAAGAATTCCAACCAAGGGGGCACTAGAAAAGCATAAACGGGAGTTGCACAGTGGTATAGAATACAAATGTGATGTATGTCTTAAGAGTTTTTCAAGCCCTTATTCCCTAAATGCGCATAAAAAAACACATGAAccaaataactttaaaatattctGTGACCTATGCCCTGGAAAGGAATTTAACAGTAAGTGTATATATCAGCGCCATATGGACGCAAAGCATAGTGGCAATGTTTATATATGTGATATTTGCAGCAAAGTTTACAGCGACCCTCCTTCTCTTAAAAGACACAAAATAACTCATGATGATGCGTATATCGCACCGTCATTTTTATGCGGTGTATGtggcaaaaaatataaaaagaaaagtcAATTAGAGGATCATCAACAAATAAAACATGAGGGCAGAACATTTGTCTGTTATTTGTGTGGTAAAACGGTTACTACCAAATCTTCACTGAGGGATCACATAAAGATACATAACAAAGAAAAAGTACATAATTGCCAGCACTGTGATAAGTCCTTTGTGAAAAGAGAAACATTATCATTGCATCTACTTACTCACACAAAGAAAAAGCCACACGTGTGTAAAGTTTGTGGCAATTCAATAATAAATGGAAATAAACTGGATAGaataaaaatccttaaaatgaGTTTTAAAGAACAGTGTGATCAAGCATTAAATGAAGATGgtacatttaaatgtttactgtgtcgcaaaaaaagaattttagatACCAAAAAATTTAGACAACACATGTATACCCATAGACTTCGAGAAATTAACCCAATCATCTGCACTATATGTAAAAGAATAATCCCAACCAAGTGGGAACTAGAAAAGCATAAACAGCAATTGCACAGTGGTGTAGAATACAAATGTGATATATGTCCTAAGAGTTATTCAAACCCTAATTGTCTTAATTCACATAAAAAAACACATGAACCGAATAACTTGAAAATATTCTGTGAATTGTGTAGTGAAAAGGAGTTTAACAGTAAGGCTGGACTTCAACGTCATATAGACGCAAAGCACAGTGGTAACGTTTACAAATGTGATATTTGCAGCAAAGTTTACAGCGACCCGCCTTCTCTTAAAAGACACAAAATAACTCATGATGATGCGTATATCGCACCGTCATTTTTATGCGGTGTatgtggaaaaaaatataacagaaaaagTCATTTAGAGAACCATCAACAAATAAAACATATGGGCAGAACATTTGTCTGTTACTTGTGTGGTAAAACTATGACTAGCAAAACTTCACTGAGGGATCACATAAGGTCACATAACAAAGAAAAACCACATAATTGCAAACATTGCGGTAAGTCATTTGTGCAAAAAGGAGCATTAAGATCGCATCTAATAACTCACACAAATGAAAAGCCACACGTTTGTAAAGTTTGTGGCAGTTCGTATTCACAACCATTATTAATTGAGAATAAACTGGATAGattagaaatattaaaattgagtTTTGAACAACAATGCAAACAAGCACTGagtaaaaatggtaaatttAACTGTCAATTGTGCCCCAAACATTATTTGGATTccgaaacatttttaaagcatatGTATATGCACAGACAGTGTGAAATGCCTAATTCATTCCCTTGCGATAAATGCGAACAGTATTTTTCCAGCCCTCTCGATTTAAGACAGCATAAAAAAGAGCACAAAGTATTTTGTATTCTGTGCAACGGAAAGGAGTTTAGTAGTAGAGGAACATTTGATTTTCACGTGGAGGCAAAGCATAGTGGAAATGTTTATAAGTGTGACGTTTGCAGTAAAGTTTTTGGTAACAAATTTAGTCTTAAATATCACCAAAAAGTTCACGATAAAACGtatattaaaccaaaatatttGTGCAGTGAATGTGGCAACACGTACACCGACAAAGAGTATCTAAAAAAGCATATCAAAAGAATACACCAAGGCATCAAGCTTAAGCGCCCCATCAGTCAGAAGTTTGTCTGTTCTTTATGCGGTAAAATGATGACTACCAGTGTTTCCCTGAGGGATCATATGAGAATACATAACAAAGAAAAACCGATTGATTGTAACCAGTGTGATAAGTCATTTACAAATAAACAAGGGTTAAGGGTGCATCTACTAACCCATACAAAGGAAAAGCCGCACGTTTGTAAACTTTGTGGCAAGTCTTATTCGCAACGAACTCCTTTGGTTACTCACATCAGGACTGTTCATGAGAATGAGAGACCGTTTGAATGTTTACTTTGTAAAAAGAGATTTGTATTAATAAAAGGAGATAAGATGAATAGGATACGAATCCTAACAATGAGTTTTAAAGACAAGTGCAAGGAAGCATTAAACAAAGATGGCTCATATAATTGTCAGTTGTGCAACAAACAGGTTTTCGAAACAGAAAAATTCAGGAGTCACATGCACATTCACAAATTACGCGAAATCAATCCAATAATGTGTACCGTATGTAATAAAGTGTTTGCAACTATTCGTAGGATGGAACAGCACAAAATAGAAGCTCACACTGGGATAGAATACAAGTGCGCTAAAtgccaaaaaatttattcaagCCCGTTAAGGTTAAAGAATCATGAAAAATTGCATGAACCGAATGACTTCGAAGTTTTCTGTATTCTCTGCAATGGAAAGAAATTTAATAGTAAAACGGCATTTAATAGCCATATAAAATCAAAGCATACTGGTGATGTTTATAAATGTGATGTTTGCAGTAAAGTCTACAGTAGCGAGGACTACCTTAAATTGCATAAAAAGACTCATGGAGACAATTatttaaatcccatttttaCTTGTGAAATTTGTGATAAAACATACTTAAGCAGAACTAGTTTTAAGCAGCATAAAATAAGAGAACACGAAGGCCGAAGATTTGTTTGTTCTATTTGTGGTAAAATAATGACCAGCAATTCTTCACTAACTACTCATATGAGGATACATAACAAAGAAAGGCCTTACAGTTGCCCGCATTGTGATAAATCATTTGTGGCAAAGTCAGGATTAAATGTACATTTACTTACCCATACGAAGGAAAAACCACATATTTGTGAAGTTTGTGGCAAATCTTATTCACAACGAGGTCCTTTCGTGATTCACATGAAGGTTGTACATGAGAAGGAGAAACCGTTTAAATGTGCCATTTGTAATAGGGGATTTGTTGTTAATAGTTTATTGAAATCACATATGAAGACACATTCGAAACCGGAAGCCGGCTGCTAG
Protein Sequence
MSFKEQCDQALNEDGTFKCSLCRKKRILDTKKFRKHMYNHRLREIDPIICTMCKRIIPTKWELEKHKQELHSGIEYKCDVCPKSFSSPYCLKSHKKTHEPNNFKIFCDLCTGKEFNSRAGFQRHVDSKHNGNVYKCDICSKVYSDPHMLKRHKITHDELYIVPTFLCSVCGKKYKSKSHLENHQQITHKGRTFVCYLCGKTITTKSSLRDHIRSHNKEKPHNCEHCDKSFVRKGTLNSHLLTHTKEKPHVCKVCGKSYSQPAPLIIHKRTVHEKKTPFKIINGDILDRIKILNMSFKEQYDQALNEDGTFKCPLCCKKRILDTRKFRNHMRNHKLREIDPIMCTVCKRRIPTKGALEKHKRELHSGIEYKCDVCLKSFSSPYSLNAHKKTHEPNNFKIFCDLCPGKEFNSKCIYQRHMDAKHSGNVYICDICSKVYSDPPSLKRHKITHDDAYIAPSFLCGVCGKKYKKKSQLEDHQQIKHEGRTFVCYLCGKTVTTKSSLRDHIKIHNKEKVHNCQHCDKSFVKRETLSLHLLTHTKKKPHVCKVCGNSIINGNKLDRIKILKMSFKEQCDQALNEDGTFKCLLCRKKRILDTKKFRQHMYTHRLREINPIICTICKRIIPTKWELEKHKQQLHSGVEYKCDICPKSYSNPNCLNSHKKTHEPNNLKIFCELCSEKEFNSKAGLQRHIDAKHSGNVYKCDICSKVYSDPPSLKRHKITHDDAYIAPSFLCGVCGKKYNRKSHLENHQQIKHMGRTFVCYLCGKTMTSKTSLRDHIRSHNKEKPHNCKHCGKSFVQKGALRSHLITHTNEKPHVCKVCGSSYSQPLLIENKLDRLEILKLSFEQQCKQALSKNGKFNCQLCPKHYLDSETFLKHMYMHRQCEMPNSFPCDKCEQYFSSPLDLRQHKKEHKVFCILCNGKEFSSRGTFDFHVEAKHSGNVYKCDVCSKVFGNKFSLKYHQKVHDKTYIKPKYLCSECGNTYTDKEYLKKHIKRIHQGIKLKRPISQKFVCSLCGKMMTTSVSLRDHMRIHNKEKPIDCNQCDKSFTNKQGLRVHLLTHTKEKPHVCKLCGKSYSQRTPLVTHIRTVHENERPFECLLCKKRFVLIKGDKMNRIRILTMSFKDKCKEALNKDGSYNCQLCNKQVFETEKFRSHMHIHKLREINPIMCTVCNKVFATIRRMEQHKIEAHTGIEYKCAKCQKIYSSPLRLKNHEKLHEPNDFEVFCILCNGKKFNSKTAFNSHIKSKHTGDVYKCDVCSKVYSSEDYLKLHKKTHGDNYLNPIFTCEICDKTYLSRTSFKQHKIREHEGRRFVCSICGKIMTSNSSLTTHMRIHNKERPYSCPHCDKSFVAKSGLNVHLLTHTKEKPHICEVCGKSYSQRGPFVIHMKVVHEKEKPFKCAICNRGFVVNSLLKSHMKTHSKPEAGC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-