Basic Information

Insect: Brachypterus glaber
Gene Symbol: -
Assembly: GCA_958510825.1
Location: OY294053.1:26268512-26282448[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 30 2.3e-06 0.00013 23.1 2.5 1 23 184 206 184 206 0.99

2 30 0.00042 0.024 16.0 0.8 1 23 212 234 212 234 0.97

3 30 5.6e-05 0.0032 18.7 2.7 1 23 240 262 240 262 0.98

4 30 1.7e-07 9.4e-06 26.7 0.7 1 23 268 290 268 290 0.98

5 30 0.00034 0.019 16.3 0.4 3 23 298 318 296 318 0.97

6 30 1.6e-06 8.9e-05 23.6 0.2 1 23 324 346 324 346 0.98

7 30 6.9e-05 0.0039 18.5 0.9 1 22 352 373 352 373 0.97

8 30 4.4 2.5e+02 3.3 0.5 2 17 459 474 458 475 0.90

9 30 0.003 0.17 13.3 2.8 1 23 566 588 566 588 0.99

10 30 0.0002 0.012 17.0 0.7 1 23 594 616 594 616 0.98

11 30 0.00011 0.0063 17.8 2.6 1 23 622 644 622 644 0.98

12 30 2.3e-06 0.00013 23.1 4.7 1 23 650 672 650 672 0.97

13 30 1.2e-05 0.00067 20.9 0.4 1 23 678 700 678 700 0.98

14 30 1.6e-06 8.9e-05 23.6 0.2 1 23 706 728 706 728 0.98

15 30 1e-05 0.00059 21.1 1.6 1 23 734 757 734 757 0.98

16 30 0.001 0.059 14.8 4.9 1 23 763 785 763 785 0.98

17 30 4.4 2.5e+02 3.3 0.5 2 17 802 817 801 818 0.90

18 30 2.2e-05 0.0012 20.1 2.4 1 23 910 932 910 932 0.98

19 30 5.7e-05 0.0032 18.7 0.5 1 23 938 960 938 960 0.98

20 30 7.7e-05 0.0044 18.3 3.9 1 23 966 988 966 988 0.98

21 30 3.4e-07 1.9e-05 25.7 0.4 1 23 994 1016 994 1016 0.98

22 30 3.6e-05 0.002 19.4 0.5 1 23 1022 1044 1022 1044 0.98

23 30 5.4e-06 0.0003 22.0 0.2 1 23 1050 1072 1050 1072 0.98

24 30 1.1e-05 0.00061 21.0 0.8 1 23 1078 1101 1078 1101 0.97

25 30 0.00029 0.016 16.5 2.0 1 23 1107 1129 1107 1129 0.98

26 30 3.7e-06 0.00021 22.5 2.0 1 23 1265 1287 1265 1287 0.98

27 30 9.1e-07 5.1e-05 24.4 1.3 1 23 1293 1315 1293 1315 0.99

28 30 1.3e-06 7.3e-05 23.9 2.2 1 23 1322 1344 1322 1344 0.98

29 30 0.00023 0.013 16.9 2.3 1 23 1350 1372 1350 1372 0.97

30 30 0.00011 0.0064 17.8 4.2 1 23 1378 1400 1378 1400 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	30	2.3e-06	0.00013	23.1	2.5	1	23	184	206	184	206	0.99
2	30	0.00042	0.024	16.0	0.8	1	23	212	234	212	234	0.97
3	30	5.6e-05	0.0032	18.7	2.7	1	23	240	262	240	262	0.98
4	30	1.7e-07	9.4e-06	26.7	0.7	1	23	268	290	268	290	0.98
5	30	0.00034	0.019	16.3	0.4	3	23	298	318	296	318	0.97
6	30	1.6e-06	8.9e-05	23.6	0.2	1	23	324	346	324	346	0.98
7	30	6.9e-05	0.0039	18.5	0.9	1	22	352	373	352	373	0.97
8	30	4.4	2.5e+02	3.3	0.5	2	17	459	474	458	475	0.90
9	30	0.003	0.17	13.3	2.8	1	23	566	588	566	588	0.99
10	30	0.0002	0.012	17.0	0.7	1	23	594	616	594	616	0.98
11	30	0.00011	0.0063	17.8	2.6	1	23	622	644	622	644	0.98
12	30	2.3e-06	0.00013	23.1	4.7	1	23	650	672	650	672	0.97
13	30	1.2e-05	0.00067	20.9	0.4	1	23	678	700	678	700	0.98
14	30	1.6e-06	8.9e-05	23.6	0.2	1	23	706	728	706	728	0.98
15	30	1e-05	0.00059	21.1	1.6	1	23	734	757	734	757	0.98
16	30	0.001	0.059	14.8	4.9	1	23	763	785	763	785	0.98
17	30	4.4	2.5e+02	3.3	0.5	2	17	802	817	801	818	0.90
18	30	2.2e-05	0.0012	20.1	2.4	1	23	910	932	910	932	0.98
19	30	5.7e-05	0.0032	18.7	0.5	1	23	938	960	938	960	0.98
20	30	7.7e-05	0.0044	18.3	3.9	1	23	966	988	966	988	0.98
21	30	3.4e-07	1.9e-05	25.7	0.4	1	23	994	1016	994	1016	0.98
22	30	3.6e-05	0.002	19.4	0.5	1	23	1022	1044	1022	1044	0.98
23	30	5.4e-06	0.0003	22.0	0.2	1	23	1050	1072	1050	1072	0.98
24	30	1.1e-05	0.00061	21.0	0.8	1	23	1078	1101	1078	1101	0.97
25	30	0.00029	0.016	16.5	2.0	1	23	1107	1129	1107	1129	0.98
26	30	3.7e-06	0.00021	22.5	2.0	1	23	1265	1287	1265	1287	0.98
27	30	9.1e-07	5.1e-05	24.4	1.3	1	23	1293	1315	1293	1315	0.99
28	30	1.3e-06	7.3e-05	23.9	2.2	1	23	1322	1344	1322	1344	0.98
29	30	0.00023	0.013	16.9	2.3	1	23	1350	1372	1350	1372	0.97
30	30	0.00011	0.0064	17.8	4.2	1	23	1378	1400	1378	1400	0.99

Sequence Information

Coding Sequence: atggAGCAGTCCTTAGATTTCGAAACCATTTGTAGAATATGTTTAGATAAAAGTCCTTTTAAAGAATTAGATTTAAAACATAAAGTTTTAGATgttgattattattttatgttaaactATTGTGCTTCAGAAATAcaggctCAAATAAACGATAGTTTACCAAATAAGGTctgtaaaaaatgtgaaaatttattagtaaagaATTACAAGTTTAGAAATTTCCTGATAGAAACTGATTCAaaactaaagaaaatattaaaaagaaagaaaactGTTGTGTTGGAGGACGCTTTAAAAATCGAGGAACCACTGAAAATCGAGGAAAACCTGAAAGTCGAGGAAAACCTGAAAGTTGaggaaaacaataaaataaaagaagaaagTGATGATAACAATGATAATTTTGATAACAATGATGaagtagaaaatagtataacTGAAGAACCAACAAATCCTCAAGAAATTAAAGTTGAATCTGATGATGAACCTTTactaaaaccaaaaaagagaaaaccttacaagaaaaaaattaaaatcgaagaTGAATCTTTCCAATGCGACTTATGTGGTAAATCCTTTTCAAAAAAAGGATACTTGCGCCAACATAAACAAACACATAACACAGAAAGGCCCTATCAATGTCAAATATGtggcaaaagatttaaaatgagtGGAGTTTTATCTGaacacaaaaaattacattcagAAGAAAAAACGCACGAATGTGAAGTGTGCCACAAAAAATTTGTCCTGGCGGGATATTTGAAGGACCATATGCGAACGCACACAGGGGAAAGACCATATATGTGTTCCTATTGCGGGAAATCATTTAAACAGTACGCTAATTTGTCTGTTCATATCCGCATTCACACGGGCGAACGGCCTTATGGTTGTGACGTATGTCAGAAAAAATTCCGCCAAGAATCCGGATTGATTTTGCACAAACGAATCCATACTGGCGAAAAACCATTCACTTGTTCGTATTGCGGGAAGTCTTTTGTGGGATCTTCTGCGTTGATAGTACATACACGCATACATACAGGAGAATTGCCTTATAAATGTCAGGTTTGCGAAAAAGGGTTCACAAACTCCGGATGTTTAAACGTCCATATACGCCGCTCGTTCCAGTGGGTAAAGACCATTCAGATAAAAGAGAGATATAAGCATTCCAAAACTAACTTGAATAACACCGTAAAAATTAAAGTCAAGAAAATGGAGCCTTTAGAATTTGGAAATATATGTAGATTGTGTTTGGATAAAAGCCCTTTTAAAGAATTAAGCGTTAAACATAAGAAACTGAACGTGGATTATTATTTTCTCTTGAGTACTTGTTTTTCAATACagGCCGAAGCAAACGATAATTTACCAAAAAAGATgtgtaaaaaatgtgaaaaagttctagtaaattattataactttCGCAGTTCTGTACTAGAGAATGATGccaaattaaaagaaattagtTCTTCAAAAACTACACTAATAAAATCTGAGAAAAATGTAGACGAGGTTAAAAAAGAAGAATCTGATGACAATTTCGATAATTCTATAGATAACGATGATAATATTGAGGATACAGCCTCAAATTCCTTAGTTGAAGTAGAGCTAGAAGCTGCTAAAACATCAAATAAACCTACTGTGTCCAGTGGAAGTGGCGAAAAGAAGATAAGAAAAGAGAAGAAGATGACAGAAACATTTCAGTGTGATGTATGTagtaaaacctttttaaaaaagggtTATTTACGCCAACATAAACAAACACATAATACTGAAAGACCATATCAATGTCAAATATGTGGTAAACGGTTTAAAATGAGTGGAGTTCTATCTGAACACAAGAAAATACATTCAGAGGAAAAAAACCATGAATGTGAAATATGTCATAAGAAATTTGTCCTGGCGGGATATTTAAAGGACCATTTGCGGACGCATACTGATGAAAGACCACATATGTGTTCTTATTGTGGGAAATCATTTAAACACAACTACAATTTAATAGTTCACACCAGGATACACAGCCAGGAAAGGCCATACGAATGTGACGTGTGCCAGAAAACATTTCGCCAAGAATCCGCATTGGTAATGCATAAACGCATTCATACTGGAGAGAAACCCTTCACTTGTTCATACTGTGGGAAGTCTTTTGTGGGATCCTCTGCTTTGATAGTACATACACGTATACATACAGGAGAGGCGCCTTACAAATGTCAAATTTGCGAGAAAGGGTTCAAGAATTCCGGATGTTTGAATGATCATATAAGgagtattcataaaaaagaaagaaattttGAATGCAATATATGCCACAACCGATTTAGTAAAAAACAGCATTTGGGGGATCATATGATGACCCATACTGATGAAAGGCCTGAAgCAGAGGCAGACGATAATTTACCAAACAAGATgtgtaaaaaatgtgaaaaagtacTAGTAAACTATTATAACTTTCGCAGCTCTGTTCTTGAAAATGATGCTAAGTTAAAAGAAGTAGCTTCTTCACAAACTCCAATAAAATCCGAGAAACATGAAGATGATGCCGTTAAAAAAGAAGAGGAagataataatgataattttgatAATTCTATAGATAATGATGATAACAACAGTGAGGATGCAGCCCCACTGGCCTTTGTCAAAGTTGAACTagaaaatgctaaaaaatctTACTTTGATGATGAAAAAACAATCGTATTAAGCAGAAGTGGCAAAAAGAAGATAAAGGGAACATTTCAATGCGATCAATGTGGAAAATCATTTGAGTTTAAAGGGAACTTATATCAACACAAAAAATCACATAAGACTGAAAGGCGTTATCAATGCCCTATATgtgaaaagaaatttaaaacaagTGGAGTTTTGTCtgaacacaaaaaaatacatgcagAGGATAAGCCGCACGAATGTTCAGTTTGCCACAAGAAATTCGCCCTTTCAGGTTATCTAAAGGAACATATGCGTACACACACCGGTGAAAGACCTTATATGTGTTCCTATTGCGGAAAGGCCTTCAAACAATACGCAAACCTGTCAGTTCACATTCGCATTCATACGGGAGAGCGCCCCTATGAATGTGACGTGTGTCAGAAACGATTCCGACAGGAATCCGGATTAGTGATGCATAAACGCATCCATACTGGCGAGAAACCCTTCACTTGTTCGTATTGCGGGAAGTCTTTTGTGGCGTCTTCTGGTTTAATTGTGCACACAAGAATCCACACGGGAGAGTTGCCTTACAAATGTCCGATTTGTGAGAAAGGGTTTACGAATTCTGGATGTTTGAACGATCACGTACGgaATATTCACAAAAAGGAAAGAAACTTTGAGTGTCAGATTTGTCAAAATCGATTTAATAAAAGACAAAGTTTAAGGGACCATATGATGACGCATACTGATGAACGTCCTGAAgCTGAGGCAGACGACAAATTACCAAGCAAAATGTGTAGCAAATGTGAAAAGCTACTGATAAGTTACTATAACTTTCGTAATTCGGTGATAGAAAATGATTTACAACTAAAAGATTTTGTTTTCATGAACACACCTTTAAAATCCGagcaaaataaagaaatcaaagtaaaaaaagagaaaaaggaTGAACCTGAAACTGAACATaacgatatttttaataagatagAAAATGATAACAGCGGTGATGACTATAATCCAATTGACTATGTAAAAGTAGAATGCGGcaagaaaaaaactaagaaaaaagttaaagttaaaaaaccTCCAGCTAAAGATGACAGAGTAGTTGTTGTGACAAAAAGTggcaagaaaaaagtaaagggAATATTTCAGTGTGACCAATGTGGAAAATCCTTTGAATTCAGAGATAATTTGCGGCAACATAAGCTTACACATAACGTGGAGAGACCATACCAATGTCCAATATGTGGAAAACAGTTTAAATCAAGTAGAAACTTATCTGAACACAAAAAAATGCATGcagtaactgGTCGAAATTTCGAATGCAACATCTGTCAAAAACGATTCTTCCGCTCTCAAAACCTAAGACGTCACATGTTAGTACATACTGGTGAAAAACCTCACATGTGCAGCTTCTGTGGAAGATCATTTTTGCAACAGTACAATTTGTCGGTTCACATAAGAATGCATACTGGGGAGGTTCCCTACGAATGTGACATCTGTCATAAAAAGTTTACGCAAGAACGAAGTATGGTGAAGCATAAAAGAACGCATACTGATGCTTCGCGGCAGATTCCTAACACTTTGCGAGCGGAGCAGCTGGCAGATCACTCTTTAAGAACTACAGGACAACAGACAGATCTTCCTTTAAGAACAGGACAACATacagatctttttttaagaACAGGACTGCAGACAGATCTTTCCTTAAGAACAGGACTGCAAACGGATCTGTCTTTAAGAACAGGACTGCAGACAGAATCTTTAAAGATAGAGTTACCGACAGATCACTTAAGAATGGTGCTGCAGACAGATCAATCCTTGCAGAAAGATATAAAGGTTGATCAATTTgatcaaaaaaatactttcaactAA
Protein Sequence: MEQSLDFETICRICLDKSPFKELDLKHKVLDVDYYFMLNYCASEIQAQINDSLPNKVCKKCENLLVKNYKFRNFLIETDSKLKKILKRKKTVVLEDALKIEEPLKIEENLKVEENLKVEENNKIKEESDDNNDNFDNNDEVENSITEEPTNPQEIKVESDDEPLLKPKKRKPYKKKIKIEDESFQCDLCGKSFSKKGYLRQHKQTHNTERPYQCQICGKRFKMSGVLSEHKKLHSEEKTHECEVCHKKFVLAGYLKDHMRTHTGERPYMCSYCGKSFKQYANLSVHIRIHTGERPYGCDVCQKKFRQESGLILHKRIHTGEKPFTCSYCGKSFVGSSALIVHTRIHTGELPYKCQVCEKGFTNSGCLNVHIRRSFQWVKTIQIKERYKHSKTNLNNTVKIKVKKMEPLEFGNICRLCLDKSPFKELSVKHKKLNVDYYFLLSTCFSIQAEANDNLPKKMCKKCEKVLVNYYNFRSSVLENDAKLKEISSSKTTLIKSEKNVDEVKKEESDDNFDNSIDNDDNIEDTASNSLVEVELEAAKTSNKPTVSSGSGEKKIRKEKKMTETFQCDVCSKTFLKKGYLRQHKQTHNTERPYQCQICGKRFKMSGVLSEHKKIHSEEKNHECEICHKKFVLAGYLKDHLRTHTDERPHMCSYCGKSFKHNYNLIVHTRIHSQERPYECDVCQKTFRQESALVMHKRIHTGEKPFTCSYCGKSFVGSSALIVHTRIHTGEAPYKCQICEKGFKNSGCLNDHIRSIHKKERNFECNICHNRFSKKQHLGDHMMTHTDERPEAEADDNLPNKMCKKCEKVLVNYYNFRSSVLENDAKLKEVASSQTPIKSEKHEDDAVKKEEEDNNDNFDNSIDNDDNNSEDAAPLAFVKVELENAKKSYFDDEKTIVLSRSGKKKIKGTFQCDQCGKSFEFKGNLYQHKKSHKTERRYQCPICEKKFKTSGVLSEHKKIHAEDKPHECSVCHKKFALSGYLKEHMRTHTGERPYMCSYCGKAFKQYANLSVHIRIHTGERPYECDVCQKRFRQESGLVMHKRIHTGEKPFTCSYCGKSFVASSGLIVHTRIHTGELPYKCPICEKGFTNSGCLNDHVRNIHKKERNFECQICQNRFNKRQSLRDHMMTHTDERPEAEADDKLPSKMCSKCEKLLISYYNFRNSVIENDLQLKDFVFMNTPLKSEQNKEIKVKKEKKDEPETEHNDIFNKIENDNSGDDYNPIDYVKVECGKKKTKKKVKVKKPPAKDDRVVVVTKSGKKKVKGIFQCDQCGKSFEFRDNLRQHKLTHNVERPYQCPICGKQFKSSRNLSEHKKMHAVTGRNFECNICQKRFFRSQNLRRHMLVHTGEKPHMCSFCGRSFLQQYNLSVHIRMHTGEVPYECDICHKKFTQERSMVKHKRTHTDASRQIPNTLRAEQLADHSLRTTGQQTDLPLRTGQHTDLFLRTGLQTDLSLRTGLQTDLSLRTGLQTESLKIELPTDHLRMVLQTDQSLQKDIKVDQFDQKNTFN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -