Bgla028918.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Brachypterus glaber
Gene Symbol
-
Assembly
GCA_958510825.1
Location
OY294053.1:5985166-5988447[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 34 0.00015 0.0084 17.4 0.2 1 23 59 81 59 81 0.98
2 34 1.3e-05 0.00076 20.7 0.8 1 23 158 180 158 180 0.97
3 34 0.001 0.059 14.8 0.4 2 23 195 216 194 216 0.97
4 34 1.9e-05 0.0011 20.3 6.0 1 23 222 244 222 244 0.98
5 34 4.2e-07 2.4e-05 25.4 5.9 1 23 250 272 250 272 0.99
6 34 1.5e-06 8.8e-05 23.7 1.7 1 23 278 300 278 300 0.98
7 34 0.0001 0.0059 17.9 3.1 1 23 306 328 306 328 0.97
8 34 4.2e-07 2.4e-05 25.4 5.9 1 23 334 356 334 356 0.99
9 34 8.1e-05 0.0046 18.3 4.5 1 23 362 384 362 384 0.98
10 34 2.5e-05 0.0014 19.9 2.3 1 23 390 412 390 412 0.97
11 34 0.00014 0.0078 17.5 7.4 1 23 418 440 418 440 0.96
12 34 4.2e-07 2.4e-05 25.4 5.9 1 23 446 468 446 468 0.99
13 34 1.5e-06 8.8e-05 23.7 1.7 1 23 474 496 474 496 0.98
14 34 0.00037 0.021 16.2 3.9 1 23 502 524 502 524 0.98
15 34 8.5e-06 0.00048 21.3 5.4 1 23 530 552 530 552 0.97
16 34 5.2e-06 0.0003 22.0 5.1 1 23 558 580 558 580 0.98
17 34 5.6e-06 0.00032 21.9 4.1 1 23 586 608 586 608 0.98
18 34 1.1e-05 0.00062 21.0 1.6 1 23 614 636 614 636 0.99
19 34 1.5e-06 8.8e-05 23.7 1.7 1 23 642 664 642 664 0.98
20 34 8.1e-05 0.0046 18.3 4.5 1 23 670 692 670 692 0.98
21 34 0.016 0.93 11.0 5.1 1 23 698 720 698 720 0.98
22 34 9.4e-06 0.00053 21.2 5.6 1 23 726 748 726 748 0.97
23 34 6.8e-06 0.00038 21.6 7.4 1 23 754 776 754 776 0.98
24 34 1.5e-06 8.8e-05 23.7 1.7 1 23 782 804 782 804 0.98
25 34 1.7e-05 0.00097 20.4 4.9 1 23 810 832 810 832 0.98
26 34 8.1e-05 0.0046 18.3 4.5 1 23 838 860 838 860 0.98
27 34 9.4e-06 0.00053 21.2 5.6 1 23 866 888 866 888 0.97
28 34 6.1e-06 0.00035 21.8 2.7 1 23 894 916 894 916 0.98
29 34 7.3e-05 0.0042 18.4 4.7 1 23 922 944 922 944 0.97
30 34 2.2e-05 0.0013 20.0 4.7 1 21 950 970 950 972 0.91
31 34 7e-08 4e-06 27.9 3.9 1 23 978 1000 978 1000 0.99
32 34 8.6e-06 0.00049 21.3 4.0 1 23 1006 1028 1006 1028 0.98
33 34 9.4e-06 0.00053 21.2 5.6 1 23 1034 1056 1034 1056 0.97
34 34 6.1e-06 0.00035 21.8 2.7 1 23 1062 1084 1062 1084 0.98

Sequence Information

Coding Sequence
atggaaacTCTAAGAATCAAAGAAGAAATGAATGAATATGGGAGTGGGGTAGTTGAAAAGCAATTGATCCCAGACGaagaaaaaatggaagttgAAATCATGGAACATAAACTTAAAAATCTCAAGGAAGAAAAAGAACGAATACTAACCATAGACAAAACATTAAACACACTATTTGTTTGTCCTTACTGTGAAGAAACATTTAAACTAAACTTTGATTTGGATGTGCATATCCTTACACATAATGAtgctaatttaaatattttagaaataaagaAGGAAGAAGATGAAATAAAAGTTCGAGATAAAAAAGATGAAATGGAAATCCAAATAAATGAAGAGCAATTTGTTCCAAATGAAGAtgaaataaaagttgaaatttttgaaCATGAACTATATgataatgaatttaaaaatattaaagttgaaAAAGAAGATAAACAAATTGTAGAGGAAGAAATGGAGTCCTTATTTATTTGTGCCTATTGTGAAAAGACTTTTAAGTTAAAGTCTAACTTAAAAGTCCACATTGTCAGACACAATGAAAAGCAAATGCATAGGcaaactgaaaataaaaataataaatgtttatattgctataaatatttTGCTAATGCATCGAGTTTAAATATACATGTTCAATTGCACACTGGAGAAAAGCCTTATAAATGTTCTCATTGCAGCAAATCTTTTGCAACTGCATCGCATTTAAAAACACATTCTCGATTGCACACTGGAGAAAAGCCTTATAAATGTTCTCATTGCAGCAAATCTTTTGTACGTGCATCGCATTTAAAAAGACATATTCGATTGCATACTGGAGAGAAGCCTCATAAATGTTCTTATTGCGACAAATCTTTTGCAGATGCATGgtatttaaaaacacatattcgaTTGCACACTGGAGAGAAGCCCCATAAATGTTCTCTTTGCTTTAAATATTTTGCACAGGCATCGAGTTTAAAAAGACATATTCAATTACACACTGGAGAAAAGCCTTATAAATGTTCTCATTGCAGCAAATCTTTTGTACGTGCATCGCATTTAAAAAGACATATTCGATTGCACACTGGAGAGAAGCCCCATAAATGTTCTTATTGCAACGAATCTTTTGCAGATACATTGCATTTAAAAAGACATATTCGATTGCACACTGGAAAGAAGCCTCATAAATGTTCTTATTGCGACAAATCTTTTGCAGATGCATGGTATTTAAAAACACATTCTCGATTGCACACTGGAGAAAAGCCTCATAAATGTTCTCATTGCAACAAATCTTTTGCAACTGCATCGCATTTAAAAACACATTCTCAATTGCACACTGGAGAAAAGCCTTATAAATGTTCTCATTGCAGCAAATCTTTTGTACGTGCATCGCATTTAAAAAGACATATTCGATTGCATACTGGAGAGAAGCCTCATAAATGTTCTTATTGCGACAAATCTTTTGCAGATGCATGgtatttaaaaacacatattcgaTTGCACACTGGAGAGAAGCCCCATAAATGTTCTTATTGCAAGGAATCTTTTGCAGATACattgcatttaaaaatacatattcgaTTGCACACTGGAGAGAAGCCTCATAAATGTTCTTATTGCGACAAATCTTTTGCAACTGCATCGCATTTAAAAACACATTCTCGATTGCACACTGGAGAAAAGCCTTATAAATGTTCTCATTGCAACAAATCTTTTGCAACTGCATcgcatttaaaaatacattctcGATTGCACACTGGAGAAAAGCCTTATAAATGTTCTTATTGCAGCAAATCTTTTGCAACTGCATCGCATTTAAAAACACATTCTCGATTGCACACTGGAGTAAAGCCTTATAAATGTTCTTATTGCAGCAAATCTTTTCTACGTGCACCGAATTTAAAAAGACATATTCGATTGCACACTGGAGAGAAGCCTCATAAATGTTCTTATTGCGACAAATCTTTTGCAGATGCATGgtatttaaaaacacatattcgaTTGCACACTGGAGAGAAGCCCCATAAATGTTCTTATTGCAATGAATCTTTTGCAGATACATTGCATTTAAAAAGACATATTCGATTGCACACTGGAGAGAAGCCCCATAAATGTTCTTATTGCAACGATTTTTTTGCAGATACATTGCATTTAAAAAGACATATTCGATTGCACACTGGAGAGAAGCCTCATAAATGTTCTCATTGCAACAAATCTTTTGCAGATGCATGGCATTTAAAAAGACATATTCAGTTGCACACTGGAGAGAAGCCTCATAAATGTTCTCATTGCAACAAATCTTTTTCAGATGAGTGGCATTTAAAAAGACATATTCGATTGCACGCTGGAGAGAAGCCTCATAAATGTTCTTATTGCGACAAATCTTTTGCAGATGCATGgtatttaaaaacacatattcgaTTGCACACTGGAGAGAAGCCCCATAAATGTTCTTATTGCAACGAATCTTTTGCAGataaattgcatttaaaaaGACATATTCGATTGCACACTGGAGAGAAGCCCCATAAATGTTCTTATTGCAACGAATCTTTTGCAGATACATTGCATTTAAAAAGACATATTCGATTGCACCCTGGAGAGAAGCCTCATAAATGTTCTCATTGCAACAAATCTTTTGCAGATGCATGGCATTTAAAAAGACATATTCAGTTGCACACTGGAGATAAGCCTTATAAATGTTCTAATTGCAGCAAATCTTATACACACGCATCagctttaaaaaaacatattgaaaGTCACAATGGGGAAAAGACCCATAAATGTTCTTATTGCAACAAATCTTTTGGCCACGCATCAAGTTTAAAATATCATATTACAATTCACACTAGGGAAACCCCCCATAAATGTTCTTATTGCGGAAAATCTTTTGCAACTACATCGCATTTAAAAAGACATTCTGGATTGCACACTGGAGAAAAGCTTTATACATGTTCTTATTGCAGCAAATCTTTTGTACGTGCATCGCATTTAAAAAGACATATTCGAATGCACACTGGAGAGAAGCCtcataaatgtttttattgcgAAAAATCTTTTGCAGATGCATGGcatttaaaaacacatattcgaATGCATACTGGAGAGAAGCCCCATAAATGTTCTCATTGCAACAAATCTTTTGCAGATGCATGGCATTTAAAAAGACATATTCAGTTGCACACTGGAGATAAGCCTTATAAATGTTCTAATTGCAGCAAATCTTATACACACGCATCagctttaaaaaaacatattgaaaGTCACACTGGGGAAAAGACCCATAAATGTTCTTAG
Protein Sequence
METLRIKEEMNEYGSGVVEKQLIPDEEKMEVEIMEHKLKNLKEEKERILTIDKTLNTLFVCPYCEETFKLNFDLDVHILTHNDANLNILEIKKEEDEIKVRDKKDEMEIQINEEQFVPNEDEIKVEIFEHELYDNEFKNIKVEKEDKQIVEEEMESLFICAYCEKTFKLKSNLKVHIVRHNEKQMHRQTENKNNKCLYCYKYFANASSLNIHVQLHTGEKPYKCSHCSKSFATASHLKTHSRLHTGEKPYKCSHCSKSFVRASHLKRHIRLHTGEKPHKCSYCDKSFADAWYLKTHIRLHTGEKPHKCSLCFKYFAQASSLKRHIQLHTGEKPYKCSHCSKSFVRASHLKRHIRLHTGEKPHKCSYCNESFADTLHLKRHIRLHTGKKPHKCSYCDKSFADAWYLKTHSRLHTGEKPHKCSHCNKSFATASHLKTHSQLHTGEKPYKCSHCSKSFVRASHLKRHIRLHTGEKPHKCSYCDKSFADAWYLKTHIRLHTGEKPHKCSYCKESFADTLHLKIHIRLHTGEKPHKCSYCDKSFATASHLKTHSRLHTGEKPYKCSHCNKSFATASHLKIHSRLHTGEKPYKCSYCSKSFATASHLKTHSRLHTGVKPYKCSYCSKSFLRAPNLKRHIRLHTGEKPHKCSYCDKSFADAWYLKTHIRLHTGEKPHKCSYCNESFADTLHLKRHIRLHTGEKPHKCSYCNDFFADTLHLKRHIRLHTGEKPHKCSHCNKSFADAWHLKRHIQLHTGEKPHKCSHCNKSFSDEWHLKRHIRLHAGEKPHKCSYCDKSFADAWYLKTHIRLHTGEKPHKCSYCNESFADKLHLKRHIRLHTGEKPHKCSYCNESFADTLHLKRHIRLHPGEKPHKCSHCNKSFADAWHLKRHIQLHTGDKPYKCSNCSKSYTHASALKKHIESHNGEKTHKCSYCNKSFGHASSLKYHITIHTRETPHKCSYCGKSFATTSHLKRHSGLHTGEKLYTCSYCSKSFVRASHLKRHIRMHTGEKPHKCFYCEKSFADAWHLKTHIRMHTGEKPHKCSHCNKSFADAWHLKRHIQLHTGDKPYKCSNCSKSYTHASALKKHIESHTGEKTHKCS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-