Bgla028719.1
Basic Information
- Insect
- Brachypterus glaber
- Gene Symbol
- -
- Assembly
- GCA_958510825.1
- Location
- OY294053.1:2389946-2391355[+]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.0091 9.4 7.3 1.1 13 38 133 159 126 162 0.75 2 12 0.25 2.6e+02 2.7 0.7 15 39 163 184 154 188 0.80 3 12 0.0017 1.8 9.6 1.2 12 29 188 205 183 215 0.80 4 12 0.031 31 5.6 1.9 13 39 217 240 210 244 0.66 5 12 0.17 1.8e+02 3.2 1.4 14 39 246 268 234 272 0.75 6 12 1.9 1.9e+03 -0.1 1.0 14 40 274 297 266 300 0.68 7 12 0.0029 3 8.9 2.3 9 30 298 320 294 327 0.78 8 12 0.016 17 6.5 1.6 13 41 329 354 322 356 0.73 9 12 0.0047 4.8 8.2 1.6 17 41 361 382 354 385 0.84 10 12 0.076 78 4.3 0.4 16 29 388 401 382 412 0.76 11 12 0.0028 2.9 8.9 1.6 12 39 412 436 402 440 0.79 12 12 0.013 13 6.8 5.7 2 39 431 464 430 469 0.81
Sequence Information
- Coding Sequence
- atgcagaacaacaatattgacGATAGAAACTCACTAAAAACTGGTGAATTAGAAGTTGAAAGTAGACCACAAACTTTAATTAATCTACAAGGAAACGAAgacgaaaatattttatttaaaaatgaaatggcGATAAAGTTTGAGAAAGAAATCGAAGACATCAAAATTGAGCCTGTTGAGCAGGATATTGAATATCAAATTAAAGATGAAGAAATAGATTTTGATAAACCAGAACTTATagatataccaaattttaatacatttgaGGACATAAATCTTGATATAAGAGAACAAGATATCAAATCTGATAatgtaaaaatggaaaatttgaTTGATAACAAGCTTCATGACTCTTTTCAGGATTCCTTTTCCAATAAAATGCATTTTCCTAACACTGATACAAAACCATTTCGATGCTCCTATTGTAAAAAGGACTTCGCAAAAAAAGCTCATTTAACGGCACATATTCGCACACATACTTTAGAAAAACCATTTGAGTGCTCTCGCTGTGATAAAAAATTCGCAACAAAATCCGGTTTAACCGCGCATATTCCTACGCATACGGATGAGAAGCCATTTGAATGCTCCTACTGTAACaagaaatttacaagacgaggTTATTTAGGCGTACATATTCGTACACATACAGATGGGAAACCATTTGAGTGCTCCTATTGCAATAAGAAATTTATAACAAATTCAAGTTTGACCGAACATATTCGTAATCATACAGGTGAGAAGCCATTTGAGTGCTTCTATTGTAAAAAGGGCTTtgcaaaaaaaagtgttttaactGAACATATTCGTATACATACTTTGGAAAAACCATTTGAGTGCTCCCGCTGTGATAAGAAATTCGGAACAAAATCCATTTTAACGACACATATTCGTACACATACAGATGAGAAGCCATTTGAATGCTCTTACTGTAACAAGAAATTTAAAAGAAGATATTATTTAGGCGTACATATTCGTACACATACAGATGGGAAACCATTTGAGTGCTCCTTTTGTAATAagaaatttataacaaaatcaAGTTTGACCGAACATATTCGTAGACATACGGGCGAGAAGCCATTTGAGTGCTCCTATTGCAATAAGAAATTAACAACAAATTCTGATTTAAGAAGCCATATTGTTACACATACTGCTGAGAAGCCATTTGAATGCCCCCATTGCAATAATAAATTCGCAAGCAAATTTCGTTTAGTCGCACACATTCTTACACATACTGCCGAGAAGTCATTTGAGTGCTCCTATTGTGATAAAAAATTCACAACAAATTCTTCTTTAAAAAGACATGTTCTTACACATACAGCTGAGAAACCATTTAAGTGCACCCATTGCAATAagcaatttacaaaaaattcttatttaagAAGCCATATTCTTAAACATCCATGCTGA
- Protein Sequence
- MQNNNIDDRNSLKTGELEVESRPQTLINLQGNEDENILFKNEMAIKFEKEIEDIKIEPVEQDIEYQIKDEEIDFDKPELIDIPNFNTFEDINLDIREQDIKSDNVKMENLIDNKLHDSFQDSFSNKMHFPNTDTKPFRCSYCKKDFAKKAHLTAHIRTHTLEKPFECSRCDKKFATKSGLTAHIPTHTDEKPFECSYCNKKFTRRGYLGVHIRTHTDGKPFECSYCNKKFITNSSLTEHIRNHTGEKPFECFYCKKGFAKKSVLTEHIRIHTLEKPFECSRCDKKFGTKSILTTHIRTHTDEKPFECSYCNKKFKRRYYLGVHIRTHTDGKPFECSFCNKKFITKSSLTEHIRRHTGEKPFECSYCNKKLTTNSDLRSHIVTHTAEKPFECPHCNNKFASKFRLVAHILTHTAEKSFECSYCDKKFTTNSSLKRHVLTHTAEKPFKCTHCNKQFTKNSYLRSHILKHPC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00244517;
- 90% Identity
- iTF_00244517;
- 80% Identity
- iTF_00244517;