Bgla001992.1
Basic Information
- Insect
- Brachypterus glaber
- Gene Symbol
- -
- Assembly
- GCA_958510825.1
- Location
- CAUEHQ010000567.1:3925-5223[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.058 60 4.7 0.8 19 29 117 127 109 143 0.78 2 11 0.00046 0.48 11.4 1.2 18 41 144 164 133 166 0.90 3 11 5.9e-05 0.06 14.3 1.5 17 41 171 192 164 194 0.89 4 11 0.0077 7.9 7.5 0.3 18 39 200 218 197 225 0.88 5 11 0.06 61 4.7 1.5 18 28 228 238 220 249 0.78 6 11 0.97 9.9e+02 0.8 1.9 14 40 252 275 240 277 0.76 7 11 1.5e-05 0.016 16.2 3.1 2 40 269 303 268 311 0.88 8 11 0.022 22 6.1 0.8 18 41 312 332 307 334 0.84 9 11 0.23 2.3e+02 2.8 2.5 17 41 339 360 329 362 0.84 10 11 1.3 1.4e+03 0.4 0.8 18 40 368 387 364 390 0.70 11 11 0.15 1.5e+02 3.4 3.7 13 41 391 416 380 419 0.74
Sequence Information
- Coding Sequence
- ATGGATTTAGTTAATATAAAGATAGAGGAAAACATTGAGGTTACTGAGCATCATTTGgaaatcaaaataaagcaagaaCCACTAGATGAAGATTTGAAAATAGATATTGAGAAAAAATTATGGAATATCAAAAATCAAGGTGatatcaattttaaagaaaataaaatatttctgcaAGAAGAATTGTTAATCCTGGATgaagaaagttttaaaaaagaaattgtagAACAAGAAAGTTGTAATGatgaaataaataacaaaaaagaaaaagagaTTGTAGATAAATTAGTAAAAGAAAATGTAGGCGAAAATTTAACTGTTCCAACACATGGtgaaaagttgtatttttgtcAGTATTGTGAGAAGAGTTTCTCCCACAAACAAGTTTTAAAAGGGCATATCCGTTTACATTTGAGGGTAAAGCCTCATCGGTGTACTGTTTGTAAAAAAGCCTTTTCAGATGTATCCAATTTTAAAAGACATATTCGCACGCACACTGGGGAAAAGCCCTATAAATGTATGCACTGTGAGAAAGCCTTTTCAATTACAGCTGATTTAAAAAGACATATTCGCACACATACTGGGGAGAGGCCCCATATATGCCCACATTGTGGGAACGCCTTTTCAAGAGCATCAATCATGAAAAGACATATACTCACGCATACTGGGGAGAGACCCTATAAATGCATGCACTGTGAGAAGGCATTTTTTAATGCATcagatttaaaaattcatattcgCATGCATACTGGGGAAAAACCTTATAAATGCACTTATTGTGAGGTAGCCTTTCCAGAATTATCTGCTTTAAAAAGACATATTCGCTTGCACACTGGAGAACAGCCCTATGAATGTACGCACTGTGAGAAAGCATACTcaaatttatcaaattttaagagACATATTCGCTGGCATAATGGAGAAAAGCCCCATACATGCACGCACTGTGAGAAAGCCTTTTTAAGTTCATCCGATCTAAAAGGTCACATTCGCACGCATACTGGGGAAAAACCCCATAAATGCACCTATTGTGATGTGGCCTTTTCACTTATGTCATCTTTAAAAAGACATATTCGCACGCACACTGGGGAAAGACCCTATAAATGCACTTATTGTGAGAGTGCTTTTGGAACAGCATCagttttaaaaatgcatattcgCAGCCATACTGGAGAGAAGCCGTACTATTGCAAGCACTGTCAAAAATCGTTTATGACatcatcatattttaaaaaacatgtgCAATCGCACTATCCTAGTGAAAATATTGTTGAAACGACTCGACTTAACGTTAGCTGA
- Protein Sequence
- MDLVNIKIEENIEVTEHHLEIKIKQEPLDEDLKIDIEKKLWNIKNQGDINFKENKIFLQEELLILDEESFKKEIVEQESCNDEINNKKEKEIVDKLVKENVGENLTVPTHGEKLYFCQYCEKSFSHKQVLKGHIRLHLRVKPHRCTVCKKAFSDVSNFKRHIRTHTGEKPYKCMHCEKAFSITADLKRHIRTHTGERPHICPHCGNAFSRASIMKRHILTHTGERPYKCMHCEKAFFNASDLKIHIRMHTGEKPYKCTYCEVAFPELSALKRHIRLHTGEQPYECTHCEKAYSNLSNFKRHIRWHNGEKPHTCTHCEKAFLSSSDLKGHIRTHTGEKPHKCTYCDVAFSLMSSLKRHIRTHTGERPYKCTYCESAFGTASVLKMHIRSHTGEKPYYCKHCQKSFMTSSYFKKHVQSHYPSENIVETTRLNVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00244562;
- 90% Identity
- iTF_00244562;
- 80% Identity
- iTF_00244562;