Bgla028722.1
Basic Information
- Insect
- Brachypterus glaber
- Gene Symbol
- -
- Assembly
- GCA_958510825.1
- Location
- OY294053.1:2399128-2400477[+]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.04 41 5.2 1.8 14 38 136 161 126 165 0.77 2 11 0.56 5.7e+02 1.6 1.8 15 38 165 185 152 190 0.79 3 11 0.0013 1.4 9.9 2.1 8 29 187 207 180 219 0.75 4 11 0.0025 2.6 9.1 1.6 13 41 219 244 208 245 0.85 5 11 4.3 4.5e+03 -1.3 0.8 18 34 252 268 251 273 0.83 6 11 0.16 1.6e+02 3.3 3.1 3 38 266 297 264 302 0.76 7 11 0.0086 8.8 7.4 1.7 14 32 304 323 297 330 0.73 8 11 0.00039 0.4 11.7 1.0 15 30 333 349 325 355 0.77 9 11 0.0081 8.4 7.4 3.7 12 29 358 375 351 385 0.78 10 11 0.0089 9.2 7.3 2.1 11 36 385 412 377 414 0.77 11 11 9.9e-05 0.1 13.6 1.6 17 41 419 440 412 442 0.89
Sequence Information
- Coding Sequence
- atgcagGACAACAGTATTGATGATAAAAGCTCACTAAAAATTGATGAGTTAGAAGTTAATGATAATCTCAGaccacaaaatttaataaatctacGAGGAAACGAAgacgaaattttatttaaaaacgaaatgCCGATAAAGTTGGAGAAAGAATACGAAGACATCAAAATTGAGACTGTTGAACAGGATGTTGAATATCAAATTAAAGATGAAGAAATGGATTTTGATATTAAACCAGAACTTATAGatatactaaattttaatacatttgtGGACATTAACCTTGATATAAGAGAACAAGATATCAAAtctgaaaatgtaaaaatggaAAGTTTAATTGATAACGAGCTTCACGACTCTTCACATGATTCCTTTTACAATAAAATGCATCTTCCTAACACTGATACGAAACCATTTCAATGCTCCTATTGTAAAAAGCACTTCGCAAAAAAGGCTCATTTAACTCCACATATTCGTACACATACTTTAGAAAAACCATTTGAGTGCTCCCGCTGTGATAAGAAATTCGCAACAAAATCCAATTTAACCGCACATAATCGTACACATACAGATGAGAAGCCATTTGAATGCTCCTACTGTAACAAGAAATTTACAAGAAGATCTTATTTGGGCGTACACATTCGTACACATACAAATGAGAAACCATTTAAATGCTCCTATTGTAGTAAGAAATTCATAACAAAATCAGGTTTAAAGGAACATATTCGTACACATACTGGTGAGATGCCATTTGAGTGCTCCGATTGTGATAAGAAATTCGCAACAAAATCTTCTTTTAAATGTCATATTCTTATACATACAGCTGATAGGCCATTTGAATGCTCCTATTGTTATAATAAATTTGCAAGCAAATCTCGTTTAATCGTACATACTCGTACACATACAGCCGAGAAGCCATTTGAATGCTCCTATTGTAATAAGAAATTCTTAAGAAAAGGACATTTAACTGAACATAATTTTACACATACAGGTGAAAAACCATTTGAGTGCTTGTATTGTAATAAAAACTTCTCAAGAAAATCACATTTAGTCCAGCATAATGTTATACATACAAATGAGAAACGATTTGAATGCTcttattgtaaaaaaacattCGCAAGAAAATGTGATTTAAAAAAGCATACTTTTACACATAGAGATAAAAAACCATTTGAATGCTCCTATTGCAGTAAGAAATTCGCAACAAAATCATATTTAAACAACCATAATCTTACACATACAGGTGAGAAGCCATTTGAATGTTCTTACTGTAATCAGACATTTGCAAACAAATCTAATTTAACAAGGCATATTCGTACACATAAGAAGCCAGTTgaattctcctgttga
- Protein Sequence
- MQDNSIDDKSSLKIDELEVNDNLRPQNLINLRGNEDEILFKNEMPIKLEKEYEDIKIETVEQDVEYQIKDEEMDFDIKPELIDILNFNTFVDINLDIREQDIKSENVKMESLIDNELHDSSHDSFYNKMHLPNTDTKPFQCSYCKKHFAKKAHLTPHIRTHTLEKPFECSRCDKKFATKSNLTAHNRTHTDEKPFECSYCNKKFTRRSYLGVHIRTHTNEKPFKCSYCSKKFITKSGLKEHIRTHTGEMPFECSDCDKKFATKSSFKCHILIHTADRPFECSYCYNKFASKSRLIVHTRTHTAEKPFECSYCNKKFLRKGHLTEHNFTHTGEKPFECLYCNKNFSRKSHLVQHNVIHTNEKRFECSYCKKTFARKCDLKKHTFTHRDKKPFECSYCSKKFATKSYLNNHNLTHTGEKPFECSYCNQTFANKSNLTRHIRTHKKPVEFSC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00244607;
- 90% Identity
- iTF_00244560;
- 80% Identity
- iTF_00244560;