Bgla028565.1
Basic Information
- Insect
- Brachypterus glaber
- Gene Symbol
- -
- Assembly
- GCA_958510825.1
- Location
- OY294053.1:659532-660689[+]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 0.33 3.4e+02 2.3 5.1 15 41 108 131 105 135 0.83 2 10 0.0019 1.9 9.5 6.6 9 41 127 156 125 158 0.85 3 10 0.0046 4.7 8.2 4.4 2 40 149 183 148 185 0.87 4 10 0.0015 1.5 9.8 3.2 14 40 188 211 177 214 0.79 5 10 0.0013 1.3 10.0 2.9 3 39 206 237 204 241 0.78 6 10 0.002 2 9.4 5.2 14 41 243 267 233 269 0.82 7 10 0.011 11 7.1 1.7 18 40 275 294 271 297 0.86 8 10 0.022 22 6.1 3.2 17 40 302 322 291 325 0.76 9 10 0.005 5.1 8.1 2.9 6 39 320 348 315 352 0.70 10 10 0.021 21 6.1 5.9 17 41 357 378 346 380 0.84
Sequence Information
- Coding Sequence
- ATGGATGTTGTTAATATAAACATAGAGGATCAAATTGAGATTCACGAGAATCCGTTGGAAATCAAGCAAGAACCCCTAGATGaagattttaaacttaaaattgaaGAAACGATAAGTGATAATAAAAACTCAGGTGATTCTAATTTCaatgaaaatgaaatatttccaaaagaagaattttttatcCTGGATGAAgaacatattaaaaaagaaattgctAATCAAGAAgacaattataatatattaaatattaaaatggaaaaagatGAACAAGATGTAGAAGAAAATTTGGAGGAAAATTTAGGACAAGCATTTGGTGAAAATTCGTTTTGTTGCTCATATTGTAAGAAGACTTTCTACCAAAAGAATGATTTAAAAAAGCATATTCGAACACACAGGGTCCATAAATGCCCGCATTGTGAAAAAGCTTATtcatattcatataaattaaaaaaacatatgcgTACGCATACTGGGGAAAAACCCTATAAATGTACGCACTGTGAAAAAGCCTTTTCAGTTTCAACGTATTTAAAGGAACATATTCGCATACATACTGGGGAACGACCCTATAAATGCATGCACTGTGAAAAAGCCTTTTCAGTTTcatcgtatttaaaaaaacatattcgcATACATACTGGGGAACTACCCAAATGTACGCACTGTGAGAAAACCTTTTCACGCCCTGGAGATTTAAATAGacatattcgcacgcatactGGGGAAAAACCCTATAAATGCACGCACTGTGAGAAATCCTTTTCTGATCATTCATCTTTGATAAGACATATTCGCAAACATACTGGGGAGAGACCCTATAAATGCACGCACTGTGAAAAAGCCTTTTCAGTTTCGTCGCATTTAAATCAACATATTCGCATACATACTGGGGAACGACCCTATAAATGCACGCACTGTGAAAAAGCCTTTTCAGTTTCATCGCATTTAAAAGGACATATTCGCATACACACTGGGGAACTACCCAAATGTACGCACTGTGAGAAAACCTTTTCTCGCCCTGGAGATTTAAATAGACATATTCGCACGCACACTGGAGAAAGACCCTATAAATGCACGCACTGTGAGAAATCCTTTTCTGTTCATTCATCTTTGACGAGACATATTCGCAAACATACTGGGGAGGAGACCCTATAA
- Protein Sequence
- MDVVNINIEDQIEIHENPLEIKQEPLDEDFKLKIEETISDNKNSGDSNFNENEIFPKEEFFILDEEHIKKEIANQEDNYNILNIKMEKDEQDVEENLEENLGQAFGENSFCCSYCKKTFYQKNDLKKHIRTHRVHKCPHCEKAYSYSYKLKKHMRTHTGEKPYKCTHCEKAFSVSTYLKEHIRIHTGERPYKCMHCEKAFSVSSYLKKHIRIHTGELPKCTHCEKTFSRPGDLNRHIRTHTGEKPYKCTHCEKSFSDHSSLIRHIRKHTGERPYKCTHCEKAFSVSSHLNQHIRIHTGERPYKCTHCEKAFSVSSHLKGHIRIHTGELPKCTHCEKTFSRPGDLNRHIRTHTGERPYKCTHCEKSFSVHSSLTRHIRKHTGEETL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00244530;
- 90% Identity
- iTF_00244530;
- 80% Identity
- iTF_00244530;