Bgla028720.1
Basic Information
- Insect
- Brachypterus glaber
- Gene Symbol
- -
- Assembly
- GCA_958510825.1
- Location
- OY294053.1:2393375-2394643[+]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 0.086 88 4.2 1.1 14 29 137 152 127 166 0.77 2 10 0.52 5.3e+02 1.7 0.9 16 39 167 187 157 191 0.78 3 10 0.0019 1.9 9.5 2.9 5 29 185 208 181 219 0.79 4 10 0.0049 5 8.2 2.3 13 41 220 245 213 247 0.85 5 10 0.028 29 5.7 2.1 18 35 253 270 249 275 0.84 6 10 0.038 39 5.3 4.0 6 32 270 296 267 302 0.69 7 10 0.00037 0.38 11.7 1.1 15 30 306 322 294 328 0.77 8 10 0.016 17 6.5 4.8 12 29 331 348 322 358 0.78 9 10 5e-05 0.051 14.5 4.3 4 37 352 386 349 386 0.86 10 10 4.5e-05 0.046 14.7 0.4 17 41 392 413 387 415 0.90
Sequence Information
- Coding Sequence
- atgcaaAACTACAGTGTTGATGATAAAAACTCACTAAAAACTGATGAGTTAGAAGTTAATGATAATCTCAGaccacaaaatttaataaatctacAAGGAAACGAAgacgaaaatattttatttaaaaaggaaaTGCCGATAAAGTTGGAGAAAGAAAACGAAGACATCAAAATTGAGACTCTTGAACAGGAAGTCGAATATCAAATTAAAGATGAAGAAATGGATTTTGATATTAAACCAGAGCTTATAGATATACTAAATTTGAATACATTTGTGGACATTAATCTTGATATAAGAGAACAAGATATCAAAtctgaaaatgtaaaaatggaaaatttaattGATAACGAGCTTCACGACTCTTCACATGATTCCTTTTACAATACAATGCATCTTCCTAACACTGATTTGAAACCATTTCAATGCTCCTATTGTAAAAAGCACTTCGCAAAAAAGGCTCATTTACCTCCACATATTCGTACACATACTTTAGAAAAACCATTTGAGTGCTCCCGCTGTGATAAGAAATTCGCAACAAACTCCAATTTAACCGCACATACTCGTACACATACAGATGAGAAGCCATTTGAATGCTCCTACTGTAACAAGAAATTTACAAGAAGATCTTATTTGGGCGTACACATTTGTACACATACAAATGAGAAACCATTTAAATGCTCCTATTGTAGTAAGAAATTCATAACAAAATCAGGTTTAAAGGAACATATTCGTACACATACCGGTGAGATGCCATTTGAGTGCTCTTATTGCGATAAGAAATTCGCAAAAAAGAATTCCTTTAAATGCCATATTCGTACACATACAGCCGGAAAGCCATTTGAATGCTCCTATTGTAATAAGAAATTCTTAAGAAAAGGACATTTAACTGAACATAATTTTACACATACAGGTGAAAAACCATTTGAGTGCTTGTATTGTAATAAAAACTTCTCAAGAAAATCACATTTAGTCCAGCATAATGTTATACATACAAATGAGAAACGATTTGAATGctcttattgtaaaaaaaaattcgcaaGAAAATGTGATTTAAAAAAGCATACTTTTACACATACAGATGAAAAACCATATGAATGCTCCTATTGCAATAAGAAATTGAAAACAAAATCATATTTAAACACCCATAATCTTACACATACAGGTGAGAAGCCATTTGAATGTTCTTACTGTAATCAGACATTTGCaaataaatctaatttaacAAGGCATATTCGTACACATAAGAAGCCAGTTGAATGCTccagttga
- Protein Sequence
- MQNYSVDDKNSLKTDELEVNDNLRPQNLINLQGNEDENILFKKEMPIKLEKENEDIKIETLEQEVEYQIKDEEMDFDIKPELIDILNLNTFVDINLDIREQDIKSENVKMENLIDNELHDSSHDSFYNTMHLPNTDLKPFQCSYCKKHFAKKAHLPPHIRTHTLEKPFECSRCDKKFATNSNLTAHTRTHTDEKPFECSYCNKKFTRRSYLGVHICTHTNEKPFKCSYCSKKFITKSGLKEHIRTHTGEMPFECSYCDKKFAKKNSFKCHIRTHTAGKPFECSYCNKKFLRKGHLTEHNFTHTGEKPFECLYCNKNFSRKSHLVQHNVIHTNEKRFECSYCKKKFARKCDLKKHTFTHTDEKPYECSYCNKKLKTKSYLNTHNLTHTGEKPFECSYCNQTFANKSNLTRHIRTHKKPVECSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00244607;
- 90% Identity
- iTF_00244607;
- 80% Identity
- iTF_00244607;