Basic Information

Gene Symbol
SMARCC2
Assembly
GCA_958510825.1
Location
OY294054.1:25942242-25946919[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.1e-14 3.4e-11 44.0 0.2 3 44 633 674 632 676 0.96

Sequence Information

Coding Sequence
ATGATGTCCCTCGGGCCTAAATCGGACGGAAGTCCAAATACGAAATACTTCGAAAGTCCAGAAGTTCTGAGTTCTCTTGAAGGTGTTAAACTTTGGCTTATGAAAACTGGAAAAAAGtacCTTACTACTGACCTCATCACAAATAAATCCCTTGCCGCTTTGACCATTCAATTAATGCAATTTCAAGAAGaatttttgggtaaaaattcgCAAAAACCTATTATGACACGCATTCCGGTGCGTTATTTTTTGGACTTTAAACCTGGAGGAGGTCTGTCCTATATATTATTGTCCGCATTTCGATTTAAAACTGAGCATGGATGGAGAAAGTTTGAACTTCCAGCAGGAAAGactAACTCAAACAAAGTTGAAAGAGTATTTGACATGTTCCAAACCATCGAAAAATCTCTTATCCAAAACAAACTTTACACGTTACCTATCGTTTACATAAAACCAGATATTGACAAAGCTATCTGTCAAAAAGTCAAAGAAATTATCCGTAAACGTAACGGACAAATTGTGGAATCGGAAGAGTCGGCAAGCCATGTCATATATGGAGTTTCAGAAACTGGTAAGGACGAATATGCTCGACCAGTTCTTAAGCGTGAAAAAATGCTGTTGATGCACTGGTATTATTTTCCGAGCTCATTTGACAGTCTGGTCAATACTGAAACCACTGGTTTAGATTACATAACAATTGATCAATCTAGTCCCAGAACTGAACCGTGGAGATTAAACTACTTATGGGTTTATGAAACTGATCAATACAATGAATGGATGACCGAGGAAGATTATGAAGTGGACGAGAGTGGAAAAAAGAAGATTCATCCTATGAGGATGACAATTGAGGATCTAATGAACCCATCGGAAAATggaaacaagaaaaagcAAAAAAGGAAGAGGTCACCATCACCTTCTTCTATTAAAACTGGTAAGCGTAAAAGTGGAAGAGGCCCTGGAAACGGTAATCATAAGAAGACAAAACCAGAAGATGAGGACGATCTCACTAAAGACATGGAAGATCCTTTGCCTGAGCCAAATATTGTAGAAGTTAGTCCCACTACTTGTCCTTCTCAACCGGCTGCTGCTACTGTTGCTGCTGCTGCCTCTACTGCTGCTGCTGCCTCtactgctgctgctgctgctgctgctgctgctgctgctgctgctgctacTGCTGCTACTACTACCAACACGAAAAAAGATCACGAACTACAACCATTAAAGGGCGGATCCTTGACAGATTTAGATGAGACTGATGATAAAGGAGATGATTCACAAACAGGAAAAAGCGATACAAACACTCAAGAGGATGGACAAGAGGATAATGTGACTGAGCAAACCCACCATATCATCATACCCTCTTATTCTTCCTGGTTTGATTACAATTCCATCCACGAGGTTGAGAAACGTGCAATGCCggaattttttaataacaaaaacaaatcaaaaactGCTGAAATATACATTGCATATCGTAATTTTATGATAGATACTTACAGATTAAATCCTACTGAGTATATCACTAGCACTGCCTGCAGAAGGAACTTAGCTGGTGATGTATGCGCTATAATGCGAGTCCATGCTTTTCTTGAACAGTGGGGATTGATTAACTATCAAGTTGATACAGAGTCTAGACCCAGTCCAATGGGACCTCCACCAACATCTCACTTTCACATCCTTACAGATAGTCCTTCGGGGCTACAACAGATTAATCCTTCTAAAACTCCACAACCTAGTGCTGCTAAAGCTCTATTGGATTTAGATAAAAGTAGTGCAGAAGCTTCACCGAAAAAAACAGAGGTTGCAGATACGTCaagttttggtttaaaattggATCAGTATATCAAGAAGCCAGCTGTACTTCGCAATAAGTCAGCTGCATCCTTAGTCCGAGATTGGACAGAGCAAGAGACATTGCTACTATTGGAAGGTTTAGAATTATACAAGGATGACTGGAACAAAGTTTGCGAACATGTAGGTTCGAGAACTCAAGATGAATGTATCTTGCATTTCTTAAGACTGCCAATTGAAGATCCTTATTTAGAGGATTCCGAAGCTGGCGGTACCTTAGGACCTTTGGCATACCAGCCCATTCCATTTAGTAAAGCTGGAAACCCTATTATGTCAACAGTTGCATTCCTTGCTTCAATTGTAGATCCTAGAGTTGCCTCGGCTGCTGCAAAATCAGCTATGAACGAATTTGCGGCTATTAAAGATGAGGTTCCAGTTTCAGTTATGGAagctcatttaaaaaatgttgaggCTTCAGCAATCGATGGAAAATTTGACCCAGCTGCTAATTTAAATCTCACTGGGATTGCTGGCACTATCCCCGATAAGGATGATCTTATTAAGAGAGAAATGGAAATCAAAGATGAAGAAAAGAAAATGAGAGAGGATTTACTTAAATCCGATGAAGAAAAACTCTTAGATATGGATTTAAAAGACAAAGAAATCAAGGAAAACGACATGCAAAGCGCAGCAGCTGCTGCTCTGGCATCAGCAGCAGTAAAAGCTAAGCATTTGGCTGCAGTTGAAGAGCGAAAAATTAAATCGCTTGTCGCACTACTAGTTGAAACTCAGATGAAAAAACTTGAGATTAAGTTGCGGCATTTTGAAGAACTAGAAACAACAATGGAGCGAGAACGTGAAGGTCTAGAATATCAAAGACAACAGTTAATAACAGAAAGACAGCAGTTTCACTTGGAACAACTAAAAGCAGCAGAATTTAGAGCAAGACAGCAGGCTCACCAACGGATACAAGCTGAGCAAGGTATTTGGCCTATATCCTCCTCCAGCATGGGGCAATCCTCTAGTTCCGACAATGGAGGAGCTAGTACGCCTACTCCTCCATCTCCCCAAGCCTCTGCAGTTAATTCTCCAGGGTTGCCGCATCACGTCAtctaa
Protein Sequence
MMSLGPKSDGSPNTKYFESPEVLSSLEGVKLWLMKTGKKYLTTDLITNKSLAALTIQLMQFQEEFLGKNSQKPIMTRIPVRYFLDFKPGGGLSYILLSAFRFKTEHGWRKFELPAGKTNSNKVERVFDMFQTIEKSLIQNKLYTLPIVYIKPDIDKAICQKVKEIIRKRNGQIVESEESASHVIYGVSETGKDEYARPVLKREKMLLMHWYYFPSSFDSLVNTETTGLDYITIDQSSPRTEPWRLNYLWVYETDQYNEWMTEEDYEVDESGKKKIHPMRMTIEDLMNPSENGNKKKQKRKRSPSPSSIKTGKRKSGRGPGNGNHKKTKPEDEDDLTKDMEDPLPEPNIVEVSPTTCPSQPAAATVAAAASTAAAASTAAAAAAAAAAAAAATAATTTNTKKDHELQPLKGGSLTDLDETDDKGDDSQTGKSDTNTQEDGQEDNVTEQTHHIIIPSYSSWFDYNSIHEVEKRAMPEFFNNKNKSKTAEIYIAYRNFMIDTYRLNPTEYITSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDTESRPSPMGPPPTSHFHILTDSPSGLQQINPSKTPQPSAAKALLDLDKSSAEASPKKTEVADTSSFGLKLDQYIKKPAVLRNKSAASLVRDWTEQETLLLLEGLELYKDDWNKVCEHVGSRTQDECILHFLRLPIEDPYLEDSEAGGTLGPLAYQPIPFSKAGNPIMSTVAFLASIVDPRVASAAAKSAMNEFAAIKDEVPVSVMEAHLKNVEASAIDGKFDPAANLNLTGIAGTIPDKDDLIKREMEIKDEEKKMREDLLKSDEEKLLDMDLKDKEIKENDMQSAAAAALASAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETTMEREREGLEYQRQQLITERQQFHLEQLKAAEFRARQQAHQRIQAEQGIWPISSSSMGQSSSSDNGGASTPTPPSPQASAVNSPGLPHHVI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-