Bgla014184.1
Basic Information
- Insect
- Brachypterus glaber
- Gene Symbol
- clz9_3
- Assembly
- GCA_958510825.1
- Location
- OY294046.1:59556885-59558981[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3e-09 1.7e-06 28.5 0.1 3 38 25 60 23 67 0.83
Sequence Information
- Coding Sequence
- ATGCCACGTGTTCCACGACGACAGTTAACTAAACATATGGAAAACATTAGAAAAAGACAGGCTAGCCATAAAGAAAATATGAAGGATGCCACAATAAAGGTAGTATCTGGCGAACTCTCCATAAGACAGGCAGCGCGGCAGTATGGATTGAGTAAATCGGCTTTGCAGCGCACTATTAAGAAATATAACAATCAGGCTGAAGATGAGACATTCGATTTCACTCGAAGGCATGGGTTTAAGACTGTTTTTTCAAATGAGGAAGAAGTTTTGCTAGTAGACTACCTAATTGCAGCTTCTAAAATGTGTTATGGCCTTACTTTAAAATCAACACGAGAACTAGCTTACAATTTTTGTATAgctaatgaaaaaattatgccTACTTCTTGGATCGAAAAAAAATGTGCTGGAAAGGAATGGATGGTATTATTTCGAAAAAGGCACCCAGTCCTAAGTCTAAGATCACCAGAGGCAACAAATCTCACTAGAGCAACAAGCTTCAACAAACATAATGTAGAtctattttttacgaatttagaaCACGTTTTACGTAAACATAAGTTTGAATGTCATCAAATCTTTAACTGTGACGAAACCGCTGTAACGACCGTGCATAAGCCCCCCAAAATATTAGCTGCTACCAAAGACAAGCAAGTTGGAAAAGTAACTAGTGCAGAAAGAGGAACTTTGGTAACAATGTGTGGAACCATATGTGCCAATGGAAGTAATATACCACCTTACATTATTTTTCCAAGAAAAACATTCAAGCTACATATGATACATGGGGGACCTTCGGGTTGCGCAGGTTCTGCATACCCTAGCGGTTGGGTAAATTTTCTCGATTACGTTCggcatctaattaaaaatacacgaTGTACTATGGATAATAAGATACTATTAATCTTAGATAATCATGAAAGCCATTACGATGTTAGAGTATTAAATATCTGTAAAGAAAACGGAATCATCTTACTTACACTTCCGCCTCATTGCAGCCACAAACTACAGCCCCTCGATTTAGCCGTTTATGGACCATTTAAGAGTTTCTATAACACATCTATGGATAATTGGATGCTTAATCGCCGAGGAGAAGGTGTAAGAATCTACGACATTCCAAGTATTGTTGATATAGCTTACAAATTGTCATTTACGCCATCAAATATTTTCAAAGCCTTCGAATCATCTGGAATTCACCCttttaattcaaatataatatatttgtcTGCTTATGTAACAGATAGAGCTCTAGATAATCCCAATGAccctaatgaaaataaaaaggaaaatttaGAAAATCATGTACCATTAACATCCCATATTATAGAAGATGCCTTACCATCAACATCTCATATTATAGATGATTCTATACCATCAACATCCGATAATATAGATATCagtataaacaatttaaaaacaaacagaaATATAATTACTCCTGAACAAGTACGACCTCATTTAAAAGCTAAGCAAAGAACGAATGCTAGGAAAGGAAGAAAACGAGCAAAATCTACTGTTCTAACAGATACTCCAAATAAGAATGAAATAGAAGAAGCGCATAATAAAAggattgaaaaaattaaaaataagattacaaaaattgaaaataagacAAAGAGCATAAAGAAACGGGTCCTGCAAGAAAGTAGCTCAGATAATGAAACCCTTGATAAAGTAAaagaaaacatcaaaaaaactaaaacaaaacaagcAAAGAAAATGGTTCAACTTGAAAGCAGTAGTTCAGAAAGTGAAATATTGGAAAACTTTGATAAAACTTCTGAGGAAATTGTAGATGAAGAAGAGATTGCGGATGAAGAAATCTGCTTAGGTGACTATGTTTTAGTAAGATATGCgactaaaaaaatgttctgCTTTTATATTGGAATTGTAGAGAAAATAGACGAACCTGATTACACTGTGAACTTTCTTAAGAAAGGATTGAAATGGACATTCGAATTTCCAGAAAAAAAGGACGAAGATGTCGTAACTAAAGATTGCATTTTGATTAAGCTTCCTGCTCCTTCTGTGTGTGGAGGTACCGAGAGAGCTTTAAAAAAACTGAGGTTTCCTATAGATCttaccaaatataatattttttaa
- Protein Sequence
- MPRVPRRQLTKHMENIRKRQASHKENMKDATIKVVSGELSIRQAARQYGLSKSALQRTIKKYNNQAEDETFDFTRRHGFKTVFSNEEEVLLVDYLIAASKMCYGLTLKSTRELAYNFCIANEKIMPTSWIEKKCAGKEWMVLFRKRHPVLSLRSPEATNLTRATSFNKHNVDLFFTNLEHVLRKHKFECHQIFNCDETAVTTVHKPPKILAATKDKQVGKVTSAERGTLVTMCGTICANGSNIPPYIIFPRKTFKLHMIHGGPSGCAGSAYPSGWVNFLDYVRHLIKNTRCTMDNKILLILDNHESHYDVRVLNICKENGIILLTLPPHCSHKLQPLDLAVYGPFKSFYNTSMDNWMLNRRGEGVRIYDIPSIVDIAYKLSFTPSNIFKAFESSGIHPFNSNIIYLSAYVTDRALDNPNDPNENKKENLENHVPLTSHIIEDALPSTSHIIDDSIPSTSDNIDISINNLKTNRNIITPEQVRPHLKAKQRTNARKGRKRAKSTVLTDTPNKNEIEEAHNKRIEKIKNKITKIENKTKSIKKRVLQESSSDNETLDKVKENIKKTKTKQAKKMVQLESSSSESEILENFDKTSEEIVDEEEIADEEICLGDYVLVRYATKKMFCFYIGIVEKIDEPDYTVNFLKKGLKWTFEFPEKKDEDVVTKDCILIKLPAPSVCGGTERALKKLRFPIDLTKYNIF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00244159;
- 90% Identity
- iTF_00244159;
- 80% Identity
- -