Bgla005210.1
Basic Information
- Insect
- Brachypterus glaber
- Gene Symbol
- -
- Assembly
- GCA_958510825.1
- Location
- OY294044.1:52418848-52421215[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6e-13 3.5e-10 40.3 0.0 2 45 14 56 13 56 0.95 2 2 6.6 3.8e+03 -1.4 0.0 30 42 505 517 505 518 0.87
Sequence Information
- Coding Sequence
- ATGGAGAaggaaaataaaagaatttttctttCGTATTCCGATGCAAATATGCAAAAAGCATTAGAAGCTGTAAAAAATggtatgagcaaaaaaaaagcatcaagaGATTTTAATGTTCCTCGCAGTACCCTTTCAAGGAAACTCTCGGGGAATGTTCCTCTTCAAAGGAAAATGGGACCACCATCCGAGCTTTCCAAAACGGAGGAAAATGTTTTTGTAGAATGGATTTTAGcaatggcaaaaaaaaaatttccagtGCACAAAGAGAACCTAATCCAgtctgtaaaaaattatttagttgaaaataACAGAAGTGACCGCTTCATCAATAATAAAACCATGACGCCAGGGAGGGCATGGTTTGAAGGATTTCTCAAACGTCACCCCAATATCAAAGAGAGACAAGCTGAGGCGGTAAGCAAGGCACGCGCAGCCGTAACCAAAGATCGAATTGAAAATTGGTTTGATGAGATCTTTAAATATATGTGCGAGAACAAATTAGAGCATGTTCTTTTGGAACCGAGTAGAATATTTAATGCCGATGAAGCAGGTTTTGCTCTTTGCCCCAAAAGTGGAAAAGTTTTGGGACCCACAAAACTTAAAGAAGATTTTTATGAAAGGGTTAATAACGAAAAAGAGCAGATCACAGTGATGGGAACATTTTCCGCAGATGGAAAATGTGTGCCACCATTGTTAATCTTTCCTTACAAAAAGATGCCTAAAGCCATAGTGGAATCTGTTCCTGAAAACTGGGCTCTTGGTCGTTCAGATAGCGGTTGGATAAACTCGGAAGTGTTTTTTGAATATATATCAAATCATTTTTTACCTTATTTAAAAGCTAATAATATTACTAAGCCAGTCATACTTTATGCTGACGGACATATATCACATCTTACTCAGCAAGTGAGTAAGCTGTGTGATGATAATGGAGTGGTTTTAATATCCCTTTTTCCAAATACTACACACATTACACAGCCTGCAGATGTTTCAGTTTTTAAGCCCCTAAAATCTGGATGGAAATCTGCTGTGAGGGAgtggaaatttgaaaattttacatttggATGCATAATCAAAGAAGTTTTTGATAAGTTTGCTACTGTCAAGACAATTCAAAATGGTTTCAGAAGATGTGGATTATACCCATTTGACAAAAACAATGTTGATTACTCAAAATGCATACCGAATAGACCAACTTCTAGCAGAGAACCTTCTATCACAGAAAAATTTCGCCTAAAGGTGCTGGAAACcattgaaagaaaaattaacgAAACAGAACTTGCTCTTTTTCACCAAACTTACAAAAATCAATGTAACTGGGAGGGATATTTTCCGGTTGTATCTACAAGTACAACATGGAAACTTAATTCACCAACTAAACTTACACCTAAAACAACTGGAGAATGGCAAACACCTGAAAATGTTAATAGTTACACTtacgaaaataaacaaaatgaagGATATAAAGTGCCAACGCCGTTCAAAAAGTGTCTACCTTTTCCACAAAGTCCTGAGAAAAATACTATACTAAAAAGAAAACGCACTATTTACCCTGCAGTTGTTTCTGGCCAAATATATcgcaatttttatgaaatcgaGAAGCAAAGAAAGTTAActcctaaattaaaaaagaataaagaaCCTGATCCTAAAGATGTCAGCTCATATGACTCAGAAACCAATTTTCCATCCATAGCTATAGTTAAAGATAaaccaagaaaaataaaaaagagaaaGAAACCAGCTTTGGAATATGCCAGCTCATCCGACACGGAAACGGATTTTCCATTTATAGAGGAAGATATTGATATAAGCGATATGGAGGAAGAAATGGACCTGAAAGAAGGAAAATTTTGCATTGTTAAATATGAGGAAAACTATTATCCtgGCATAGGCTCTTGGAAATGGCCGTTAAAAGAAGATGTCCTTTACTACTTTAAAGATGATATTATGGCTATAATTAAAGATCCGTTGGTTAAAAATAACAGAGGCCACTATACTGTTCcggaaatgtcaaaatatgaataa
- Protein Sequence
- MEKENKRIFLSYSDANMQKALEAVKNGMSKKKASRDFNVPRSTLSRKLSGNVPLQRKMGPPSELSKTEENVFVEWILAMAKKKFPVHKENLIQSVKNYLVENNRSDRFINNKTMTPGRAWFEGFLKRHPNIKERQAEAVSKARAAVTKDRIENWFDEIFKYMCENKLEHVLLEPSRIFNADEAGFALCPKSGKVLGPTKLKEDFYERVNNEKEQITVMGTFSADGKCVPPLLIFPYKKMPKAIVESVPENWALGRSDSGWINSEVFFEYISNHFLPYLKANNITKPVILYADGHISHLTQQVSKLCDDNGVVLISLFPNTTHITQPADVSVFKPLKSGWKSAVREWKFENFTFGCIIKEVFDKFATVKTIQNGFRRCGLYPFDKNNVDYSKCIPNRPTSSREPSITEKFRLKVLETIERKINETELALFHQTYKNQCNWEGYFPVVSTSTTWKLNSPTKLTPKTTGEWQTPENVNSYTYENKQNEGYKVPTPFKKCLPFPQSPEKNTILKRKRTIYPAVVSGQIYRNFYEIEKQRKLTPKLKKNKEPDPKDVSSYDSETNFPSIAIVKDKPRKIKKRKKPALEYASSSDTETDFPFIEEDIDISDMEEEMDLKEGKFCIVKYEENYYPGIGSWKWPLKEDVLYYFKDDIMAIIKDPLVKNNRGHYTVPEMSKYE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -