Bgla024630.1
Basic Information
- Insect
- Brachypterus glaber
- Gene Symbol
- -
- Assembly
- GCA_958510825.1
- Location
- OY294051.1:3876057-3881095[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 7.8 4.6e+03 -1.6 1.2 35 45 80 90 78 90 0.89 2 4 6.7e-08 3.9e-05 24.2 0.0 3 42 123 162 121 164 0.94 3 4 0.0002 0.11 13.1 0.0 2 31 288 317 287 321 0.95 4 4 1.5e-06 0.00086 19.9 0.0 5 41 488 524 486 526 0.92
Sequence Information
- Coding Sequence
- ATGGATACAGAGTCATCCGACAGTAACCCTGAGACAGAGGAAGACAATTCAATCAGTGATTATCTGGAAGTAGTGtgtaaagaagaaaaagaaggaaATGCAAAACATGCAAATATTAAAGAAGAAGAGTATATAAAAGAAGACGAAGAGAATGAAGAAGAACAAGAGAGTGAAAAAGATGAGAGTTATAAAGAAGAAGAAAGTGAACTGGAAGAAGACagtgaaaaagaagaaaaaagaaggaaaagaggaaaatataaaaccaagagaAAAActagaaaagtaaaaaataaaaaaggaaaagatGATGATTCAGATTCTGATCCTGAACCTGAATATGGtGATAGGCGGGGTAGATTTGAAGCTGACACTTTAAAACAAGCGATAGAAGCCTACAAAAGTAAAGAAATGACAATGAAGAAGGTATGCGAAACATTCAACATTTCGAAACGAACGTTTAAGCGACACCTAGAGGGCGACACCGACTACTATTCAACCACTTTGCCATACGACGTCGAAGCCAAAATCGTCGAGtgcattttaaaattgaatCCGCAGGAAATTTGCGTCCGGATCAACGATTTTAGGAAACTGGCCTACGATATTGCGGAAAAGAACAACTATAAACatacttttaatagaaaattaaagaTGGCCGGTACAAAATGGTACTATTGTTTCCTGCAAAGGCATCCTGATGTTGCGGCCAAAATGACGGAATTAAGAAGAACTGACGATATTAAAAAGATTTCGCCCGAGCTGTTGAACAGTTTGGTCGACCACGTGTGTTCTAACACAAAAGTGAAAATGGATGTAAAAAATGAAAAGGAGGAGGAGGAAAAACCCCCCAAgagcaCCAACCCAGAAGACATGTTGGTAGCGCTAGAAGACTTCAGAACAAAAAAACTAAGTCTATACAAATGTTGCGAAATCTACAACATATCCcgacgaattttcaaaaaactgttgATCGATGAAGGCCTAGTAAAACCGATAACGAAGGGCCGCAGAACCACTTTACCTCCCGAGGTAGAAAAATGCATTGTCGATAGCATAATGGCCATACCTCAGCCTTTAATAGTGACTATCACACACTGTCGAAAACTGGCTTATGAAATAgccgaaaaaaattgttttaagcaCAGTTTTAACAAAAGATTGAAAATAGCTGGGGAACAGTGGTATTATAACTTTATTGAAAGGCATCCTCAGGTGGGACAAAGGGTCTCAGACTCAAGAAAAGCTGTGAATAAAGTCAAAATCAGTGTACAAGAGCAGGCAAAAGACATGATTGAGAAAATATGTGAGGATCCCACCCCAGATCTCAGCGTTATCAACAACCTAATGGCCGAATGTGAGGCTCAGTGTGAGGTTCCTGTGAGGACAGATGAGGTGATCATAGGAGAAGACGGCAAAAGAAAAAGAAGGAAAAAACAAAAGAACATGTGGTCTGCTCAAGATATGTGGACCGCACTAGATCTATACCGCAACAAAAAAATGGGATTCGCCACCGTCTGCAGAACCTTCAACATCCCAAAGGCTACCTTCAAACGCCATTTTGAAGGCAAAAACAAAAGACCGTCGTCATCGATCATCAAATTCAACGGTCGATTGCCAGCTCTACCACAAGAAGTCGAAGAAATGATAGTCGACCATATTTTCCGAGCAAAcaatataaatgtcaaagaaTGTAGAAAATTGGCTTTTGAAATTGCAGAAAAACATGGAGTTAAACATCAGTTTAACAAAAAAACGAGAAGTGCAGGTAAAACTTGGTACGTTAACTTCGCGGAAAGGTATCCACAGGTAAAAGACAAGGTTATAGATAAAAGAAACAAGAAAAACGTCAACGCGAATGTCAGCGTCATTACCGAGTCATACGAACAGCCTTTGGACATGTCTCATAATTTCATACAATTTATGGAAAACGTGAATTCTGCAGGTTTGAATCATACGATGGCGGAGTGTGCACCGTCCACTGTTGGGGTTGGTCATTTTATGTCGTGA
- Protein Sequence
- MDTESSDSNPETEEDNSISDYLEVVCKEEKEGNAKHANIKEEEYIKEDEENEEEQESEKDESYKEEESELEEDSEKEEKRRKRGKYKTKRKTRKVKNKKGKDDDSDSDPEPEYGDRRGRFEADTLKQAIEAYKSKEMTMKKVCETFNISKRTFKRHLEGDTDYYSTTLPYDVEAKIVECILKLNPQEICVRINDFRKLAYDIAEKNNYKHTFNRKLKMAGTKWYYCFLQRHPDVAAKMTELRRTDDIKKISPELLNSLVDHVCSNTKVKMDVKNEKEEEEKPPKSTNPEDMLVALEDFRTKKLSLYKCCEIYNISRRIFKKLLIDEGLVKPITKGRRTTLPPEVEKCIVDSIMAIPQPLIVTITHCRKLAYEIAEKNCFKHSFNKRLKIAGEQWYYNFIERHPQVGQRVSDSRKAVNKVKISVQEQAKDMIEKICEDPTPDLSVINNLMAECEAQCEVPVRTDEVIIGEDGKRKRRKKQKNMWSAQDMWTALDLYRNKKMGFATVCRTFNIPKATFKRHFEGKNKRPSSSIIKFNGRLPALPQEVEEMIVDHIFRANNINVKECRKLAFEIAEKHGVKHQFNKKTRSAGKTWYVNFAERYPQVKDKVIDKRNKKNVNANVSVITESYEQPLDMSHNFIQFMENVNSAGLNHTMAECAPSTVGVGHFMS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -